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Author SHA1 Message Date
Allen Byrne
0ff3a85a48 [svn-r29681] HDFFV-1956: h5diff will warn if a dataset is virtual instead of failing. h5diff does not consider the layout type when comparing datasets. 
SKIP h5repack VDS tests until h5repack is fixed.
Additional tests to be skipped
 2016-04-11 08:53:55 -05:00
Allen Byrne
7fe0324fc4 [svn-r29680] HDFFV-1956: h5diff will warn if a dataset is virtual instead of failing. h5diff does not consider the layout type when comparing datasets. 
SKIP h5repack VDS tests until h5repack is fixed.
 2016-04-11 08:45:33 -05:00
Larry Knox
921b68afa7 [svn-r29678] Revert r29672 changes to h5diff. 
Tested h5committest.new
 2016-04-09 13:48:43 -05:00
Allen Byrne
1335631f3d [svn-r29673] Fix typo of var name 2016-04-08 12:44:36 -05:00
Allen Byrne
1a5ee65d50 [svn-r29672] HDFFV-1956: h5diff will warn if a dataset is virtual instead of failing. h5diff does not consider the layout type when comparing datasets. 2016-04-08 12:43:59 -05:00
Dana Robinson
c575abdeff [svn-r29668] Added H5Dfarray.c to CMake. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           CMake serial
 2016-04-07 20:06:17 -05:00
Dana Robinson
305d218725 [svn-r29665] Added new chunk index types to h5debug. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           Autotools serial
 2016-04-07 15:31:17 -05:00
Dana Robinson
e5c94192d7 [svn-r29659] Added fixed array chunk indexing from revise_chunks. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           Autotools serial w/ Java, Fortran, & C++
 2016-04-07 13:21:47 -05:00
Dana Robinson
f2c3407eb6 [svn-r29655] Added H5D_CHUNK_BTREE to the deprecated section of H5Dpublic.h. 
Tested on: 64-bit Ubuntu 15.10 (build only, not used in existing code)
 2016-04-07 09:50:44 -05:00
Scot Breitenfeld
77a806591d [svn-r29653] fixed A variable that is specified as an argument to the intrinsic procedure C_LOC must either have type and type parameters that are interoperable with a C type, or be a nonpolymorphic, scalar variable with no length type parameters. 2016-04-07 08:54:48 -05:00
Scot Breitenfeld
02a07cb0cf [svn-r29649] changed indentation format, updated comments 2016-04-06 13:30:16 -05:00
Scot Breitenfeld
01f479abb4 [svn-r29648] FIX: HDFFV-8486 
h5tbmake_table_f is missing the fill_data parameter (which is in the C counterpart)

ADDED NEW API: h5tbread_table_f

Tested: platypus, ostrich
 2016-04-06 13:07:17 -05:00
Scot Breitenfeld
54d598aa44 [svn-r29646] FIX: HDFFV-9522 
Add support for variable length datatypes in the High Level H5LT Fortran APIs

Tested: platypus (gnu)
 2016-04-06 10:17:02 -05:00
Quincey Koziol
b84fc45857 [svn-r29644] Description: 
Finish correcting initializer for chunked layouts.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (to minor to require h5committest)
 2016-04-05 23:18:54 -05:00
Quincey Koziol
c622ca83f5 [svn-r29640] Description: 
Add missing inializer from revise_chunks branch.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial
    (Too minor to require h5committest)
 2016-04-05 11:52:38 -05:00
Dana Robinson
939da8a35e [svn-r29638] Added new chunk index types to trace code. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
 2016-04-05 09:49:50 -05:00
Quincey Koziol
5d46ad9b39 [svn-r29635] Description: 
Bring support for earray and v2 B-trees from revise_chunks branch to
trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
 2016-04-05 02:12:56 -05:00
Quincey Koziol
a816d03108 [svn-r29632] Description: 
Align w/revise_chunks branch

Tested on:
    MacOSX/64 10.11.4 (amazon) w/parallel
    (h5committest forthcoming)
 2016-04-04 23:11:54 -05:00
Quincey Koziol
4282c5f01f [svn-r29630] Description: 
Minor style cleanups, from revise_chunks branch

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel and production
    (too minor to require h5committest)
 2016-04-04 22:45:38 -05:00
Quincey Koziol
c7d4951634 [svn-r29626] Description: 
Revise method of invoking object flush callback.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial & parallel
    (h5committest forthcoming)
 2016-04-04 17:22:56 -05:00
Quincey Koziol
2221a9a96e [svn-r29625] Description: 
Removed unused routines

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial & parallel
    (h5committest forthcoming)
 2016-04-04 17:14:54 -05:00
Dana Robinson
0024745638 [svn-r29620] Merge of r29619 from revise_chunks. Minor H5Fpublic.h comment update. 
Tested on: 64-bit Ubuntu 15.10 (build only, no code changes)
 2016-04-04 16:01:45 -05:00
Quincey Koziol
86f401d740 [svn-r29614] Description: 
Bring updated code for setting chunk size information from revise_chunks
branch.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
 2016-04-03 04:18:25 -05:00
Quincey Koziol
3cd705e56e [svn-r29612] Description: 
Bring updated layout and EFL property comparisons and new "latest format"
flags from revise_chunks branch.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
 2016-04-03 03:48:50 -05:00
Quincey Koziol
9d2178ab88 [svn-r29607] Description: 
Bring "don't filter partial edge chunks" capability from revise_chunks
to trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/debug, production & parallel
    (h5committest forthcoming)
 2016-04-02 04:39:32 -05:00
Scot Breitenfeld
e45885dea9 [svn-r29603] HDFFV-9746 Add test for "/" for H5LTpath_valid 
Tested: jam (gnu)
 2016-04-01 16:30:24 -05:00
Allen Byrne
8e41b14811 [svn-r29601] Cleanup case of CMake commands in tools. 
Update CTestCustom file for new tests.
Add connection from HDF5_ENABLE_USING_MEMCHECKER cmake option to library define USING_MEMCHECKER.
 2016-03-31 09:02:24 -05:00
Scot Breitenfeld
018f92063e [svn-r29599] added comments to source 2016-03-30 14:11:41 -05:00
Scot Breitenfeld
6b21276650 [svn-r29591] Changed buf variable in h5awrite_f from INOUT to IN 2016-03-29 09:46:58 -05:00
Allen Byrne
261f8c8361 [svn-r29560] Remove list and check of flags, defer to library function for checking, which will return an error. That error then produces a HDF5FunctionArgument exception instead of IllegalArgument exception. 2016-03-24 12:21:04 -05:00
Allen Byrne
d9ab44fe46 [svn-r29557] Add comments to CMake macros and do append error file 
revise_chunks rev 29556
 2016-03-24 10:59:00 -05:00
Binh-Minh Ribler
eb66e7537c [svn-r29554] Description: 
Removed an extra line in the Copyright block.  No need to test.
 2016-03-24 10:01:41 -05:00
Dana Robinson
53a286f7da [svn-r29552] Normalization with revise_chunks in preparation for big merge. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
 2016-03-24 00:19:52 -05:00
Dana Robinson
caf3b0db14 [svn-r29549] Minor normalization w/ revise_chunks in preparation for big merge. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
           autotools parallel (MPICH 3.1.4)
 2016-03-23 23:27:14 -05:00
Dana Robinson
9333a2e39c [svn-r29548] Minor normalization w/ trunk in preparation for big merge. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
           autotools parallel (MPICH 3.1.4)
 2016-03-23 22:58:43 -05:00
Dana Robinson
32f21214bb [svn-r29545] Minor normalization w/ trunk in preparation for big merge. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
           autotools parallel (MPICH 3.1.4)
 2016-03-23 19:38:03 -05:00
Dana Robinson
8ed8520c19 [svn-r29537] Added "latest format" tests to h5copy and h5repack from revise_chunks. 
Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
           cmake serial
 2016-03-23 14:32:59 -05:00
Dana Robinson
5a9a9e8f0e [svn-r29534] Normalization w/ revise_chunks in preparation for big merge. 
tools directory

Also fixes a minor Java test output error.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial w/ Java, Fortran, & C++
 2016-03-23 12:42:06 -05:00
Dana Robinson
710d1caf54 [svn-r29531] Normalization w/ revise_chunks in preparation for big merge. 
hl and bin directories

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial w/ Java, Fortran, & C++
 2016-03-23 11:50:42 -05:00
Allen Byrne
0e8941b088 [svn-r29524] Fix typo in test name 2016-03-22 15:12:39 -05:00
Allen Byrne
e3183aab0d [svn-r29523] Add test dependency 2016-03-22 15:12:07 -05:00
Allen Byrne
a4ec4e3eb1 [svn-r29520] rename java test file because test modifies original file. 
Delete copy when test is finished.
 2016-03-22 15:02:33 -05:00
Allen Byrne
bb80d618be [svn-r29519] rename java test file because test modifies original file. 2016-03-22 14:58:35 -05:00
Allen Byrne
07b2f73506 [svn-r29513] Only delete the copied and generated test files. 2016-03-22 12:55:45 -05:00
Allen Byrne
98e315ffff [svn-r29507] Add actual file name to delete functions to prevent accidental deletion of source files. 
(HDFFV-9730 created for tools scripts, which is the basis for the java scripts)
 2016-03-22 10:15:44 -05:00
Dana Robinson
5309de6c54 [svn-r29503] The parallel and enable Java options have been marked as 
"unsupported" in the autotools.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools parallel w/ Java
 2016-03-22 03:03:50 -05:00
Dana Robinson
7255d1a1b8 [svn-r29502] The thread-safety and enable Java options have been marked as 
"unsupported" in the autotools.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial w/ Java
 2016-03-22 02:59:28 -05:00
Dana Robinson
9c3568819f [svn-r29501] - POSIX compliance changes to autogen.sh 
- autogen.sh now exits on unknown arguments

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
 2016-03-22 02:37:07 -05:00
Dana Robinson
2280524115 [svn-r29500] Made CMake header generation a normal (not advanced) option 
since users will need to set this if they check out source.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           CMake serial (CMake 3.2.2)
 2016-03-22 02:28:14 -05:00
Dana Robinson
6668fe8c83 [svn-r29499] Minor prettification of Java configure code and library 
settings file.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial w/Java
 2016-03-22 02:22:52 -05:00