Commit Graph

13910 Commits

Author SHA1 Message Date
Allen Byrne
ed9115f283 [svn-r25478] update ubuntu info 2014-07-24 11:13:48 -05:00
Scot Breitenfeld
f793c50e47 [svn-r25477] Added error if Fortran's default real is double precision. If it is and HL is being built then configure returns an error. This is due to HDFFV-889.
Tested: jam with intel and -r8 flag, both with and without --disable-hl.
2014-07-24 10:55:16 -05:00
Scot Breitenfeld
c85497442b [svn-r25475] Fixed for nh5pget_fill_valuec_c where we called the wrong function
ret_value = nh5pset_fill_value_c(prp_id, type_id, _fcdtocp(fillvalue))

HDFFV-8879

Tested: jam( intel, gnu)
2014-07-23 13:50:06 -05:00
Scot Breitenfeld
00e4cbc963 [svn-r25473] Added VALUE to callback group_id type. Needed to fix problem when hid_t is 64-bit.
Tested: jam (intel, gnu)
2014-07-23 12:01:51 -05:00
Scot Breitenfeld
1ebce1bfcf [svn-r25469] Removed duplicate BIND(C) type defintion.
Tested: (jam: gnu, intel)
2014-07-22 15:55:08 -05:00
Mohamad Chaarawi
bd66cdd5d6 [svn-r25468] some code refactoring to align trunk with VOL branch.
tested with h5committest.
2014-07-22 14:54:51 -05:00
Albert Cheng
f1f7b15e50 [svn-r25465] BUg fix: HDFFV-8881
testfrome.c has incorrectly exit code (using -1). Fixed by replacing them
with C defined EXIT_FAILURE. Verified by temporary decreaing MAXNUMTESTS
to introduce failure in testhdf to see the changed code did work.
Also replaced all other correctly coded exit codes with the C defined
EXIT_SUCCESS and EXIT_FAILURE. This would help portability for non-Unix
systems.

Tested: h5committest.
2014-07-22 14:06:18 -05:00
Mark Evans
d4d24390a2 [svn-r25460] The contents of this directory is the C++ Reference Manual and
is generated by Doxygen.
2014-07-22 08:12:36 -05:00
Mark Evans
ee28a1ad8b [svn-r25459] Merged revision(s) 25457 from branches/hdf5_1_8_13/c++/src/H5CppDoc.h:
Added a sentence suggested by Barbara to the Installation section. Part of HDFFV-8868 work. 

Tested: Doxygen and Firefox
2014-07-21 13:51:56 -05:00
Quincey Koziol
61a411b02f [svn-r25450] Description:
Initial tweaks to align with VOL branch.

Tested on:
    Mac OSX/64 10.9.3 (amazon) w/gcc 4.9
    (h5committest not required, too small)
2014-07-21 11:05:04 -05:00
Mark Evans
4344c1d70b [svn-r25446] Changed file in Installation section where users should look for instructions from release_docs\INSTALL_Windows.txt to release_docs\INSTALL. Fixes HDFFV-8868.
Tested: Doxygen
2014-07-21 11:00:55 -05:00
Mark Evans
ae25c80cc0 [svn-r25441] Changed file in Installation section where users should look for instructions from release_docs\INSTALL_Windows.txt to release_docs\INSTALL.
Tested: Doxygen
2014-07-21 10:30:23 -05:00
Scot Breitenfeld
7595d00ae5 [svn-r25440] Fixed type conversion in h5pset_fill_value and fixed for
nh5pget_fill_valuec_c we call the wrong function
ret_value = nh5pset_fill_value_c(prp_id, type_id, _fcdtocp(fillvalue))

HDFFV-8879

Tested: jam( intel, gnu)
2014-07-21 10:09:56 -05:00
Quincey Koziol
453f9d7b20 [svn-r25439] Description:
Minor tweaks to updated hyperslab code, before larger revision coming.

Tested on:
    Mac OSX/64 10.9.3 (amazon) w/gcc 4.9 & parallel
    (h5committest forthcoming)
2014-07-21 09:41:39 -05:00
HDF Tester
84d0a9f7cb [svn-r25434] Snapshot version 1.9 release 189 2014-07-20 05:09:27 -05:00
Allen Byrne
186aca8b49 [svn-r25412] Add ASPRINTF define - check already in configure 2014-07-14 11:26:49 -05:00
HDF Tester
06e4e32ba0 [svn-r25407] Snapshot version 1.9 release 188 2014-07-13 07:32:17 -05:00
Mohamad Chaarawi
92cc75bfae [svn-r25401] add serial and parallel regression tests for zero dset read/write bug. 2014-07-09 14:01:25 -05:00
Mohamad Chaarawi
6d637e03f7 [svn-r25399] bug fixes where a wrong type was used instead of hid_t. 2014-07-09 12:12:38 -05:00
Mohamad Chaarawi
382976f3e9 [svn-r25398] add a check to make sure MPI_File_get_size() returns correct value (HDFFV-8856). 2014-07-09 10:19:11 -05:00
Mohamad Chaarawi
06ef71a37f [svn-r25397] - remove configure checks for MPI_File_get_size and Big
MPI_File_set_size as they are supported by most MPI implementations.
- fix bug in t_mpi.c (HDFFV-8856)
2014-07-07 13:22:48 -05:00
HDF Tester
5ad9bfb322 [svn-r25395] Snapshot version 1.9 release 187 2014-07-06 07:31:55 -05:00
Mohamad Chaarawi
ee9d595a8c [svn-r25392] fix HDFFV-8761:
allocating space for zero-length chunked dataset and asserting.
2014-07-03 10:43:48 -05:00
Mohamad Chaarawi
43b3c20c93 [svn-r25386] remove double declaration of off and len. 2014-07-01 15:06:22 -05:00
HDF Tester
8925b39181 [svn-r25378] Snapshot version 1.9 release 186 2014-06-29 05:24:43 -05:00
Allen Byrne
28ec2d2693 [svn-r25357] Change default timeout to 1200 seconds or 20 mins
adjust up for certain tests.
2014-06-25 09:15:13 -05:00
Allen Byrne
d9c1c23c38 [svn-r25350] Add more vfd tests to smaller timeout limits 2014-06-24 10:14:32 -05:00
Allen Byrne
e90941e86a [svn-r25343] Add more vfd tests to smaller timeout limits 2014-06-23 16:57:13 -05:00
Allen Byrne
5849a90e16 [svn-r25341] HDFFV-8845: Propagated changes made to configure.ac to cmake. Enabled MSVC for two tests as suggested in the issue. 2014-06-23 13:26:41 -05:00
HDF Tester
fbaf82bc3c [svn-r25339] Snapshot version 1.9 release 185 2014-06-22 05:26:37 -05:00
John Mainzer
12ee3deb82 [svn-r25321] Reworked and enhanced extreme sanity check in H5C.c, fixing an
uninitialized variable bug in passing.

Added the H5C_get_entry_ptr_from_addr() and H5C_verify_entry_type()
in H5C.c, along with their pass through functions in H5AC.c.  Note
that H5C_get_entry_ptr_from_addr() is quite slimey, and should be
avoided if possible.

Updated fractal heap to use flush ordering to force children
in the hdr / iblock / dblock tree to be flushed prior to parents.
This is part of a port of the fractal heap to the V3 cache, although
I gather that it will also be useful for SWMR.

Added sanity checking code to the fractal heap to verify that direct 
blocks are flushed before their parent indirect blocks, child indirect
block are flushed prior to their parent indirect blocks, and that the
root iblock or dblock is flushed prior to the header

Tested on:

        Jam: Serial and parallel
        Phoenix (Debian): serial, debug and production
        amazon (MacOS): serial
2014-06-18 13:18:36 -05:00
Mark Evans
471aedb1e8 [svn-r25317] Edited the Introduction section.
Tested: Doxygen and Firefox
2014-06-18 11:10:27 -05:00
Allen Byrne
c194e9c9a7 [svn-r25313] Use cmake var to store name of created h5_test_kind_xxxx mod file.
Tested: local linux
2014-06-18 09:28:09 -05:00
Allen Byrne
9c4e646c1a [svn-r25310] Add max time for VFD objcopy test 2014-06-18 08:39:37 -05:00
Scot Breitenfeld
bfb60a0cc1 [svn-r25304] Fixes latest check-in errors for:
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof

(1) Removed the overloaded h5_sizeof functions for characters and integer arrays since Sun compilers don't allow them to be passed into a function that uses sizeof.

(2) Requested min. precision for reals to avoid duplicate interfaces when the flag -r8 (or equiv.) is set.

tested:
*jam: intel, -i8 -r8 --enable-fortran2003
*jam: pgi, --enable-fortran2003
*emu: sun, --enable-fortran2003
2014-06-17 13:09:39 -05:00
Allen Byrne
0b75068901 [svn-r25302] Add nounistd option to flex command for windows caompatibility 2014-06-17 09:50:49 -05:00
Allen Byrne
890a76ea64 [svn-r25300] Add flex / bison commands to bin script and regenerate hl files using latest versions.
No other files touched.
Tested: h5committest
2014-06-16 15:12:42 -05:00
Allen Byrne
8c56c5096e [svn-r25299] correct case of CMake commands 2014-06-16 14:26:18 -05:00
Scot Breitenfeld
90757478c2 [svn-r25294] added implicit none 2014-06-16 12:06:46 -05:00
Scot Breitenfeld
7d3ff84d59 [svn-r25291] Fix for:
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof
2014-06-16 11:56:01 -05:00
Scot Breitenfeld
9cf0844928 [svn-r25290] Fix for:
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof
2014-06-16 11:38:07 -05:00
Scot Breitenfeld
59517a164b [svn-r25287] Fix for:
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof
2014-06-16 10:33:06 -05:00
Scot Breitenfeld
744bc7d236 [svn-r25286] Fix for:
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof 

Tested: jam (gnu, intel) with make and cmake.
2014-06-16 10:15:25 -05:00
HDF Tester
588a733b18 [svn-r25285] Snapshot version 1.9 release 184 2014-06-15 04:58:19 -05:00
Quincey Koziol
ec408ef083 [svn-r25283] Description:
Correct error in new hyperslab selection test to use the right # of
dimensions for start/stride/count/block arrays.  Also, switch H5Sselect_select
to H5Smodify_select.

Tested on:
    MacOSX/64 10.9.3 (amazon) w/gcc 4.9.1, OpenMPI, C++, FORTRAN & threadsafe
    (Too minor to require h5committest)
2014-06-13 22:23:54 -05:00
Allen Byrne
e23830d29f [svn-r25282] remove obsolete file 2014-06-13 16:16:34 -05:00
Dana Robinson
25ba47bc97 [svn-r25274] Adds #defines that ensures that DllMain is only compiled in when the thread-safe shared library is built on Windows.
Fixes HDFFV-8837.

Tested on 64-bit Windows 7 with VS2012.
2014-06-13 03:44:34 -05:00
Quincey Koziol
4ccb865c70 [svn-r25273] Description:
Bring in Chao/Neil/my changes to optimize hyperslab selection operations
further, along with 3 new public API routines: H5Scombine_hyperslab(),
H5Sselect_select() and H5Scombine_select(), along with many minor cleanups to
the code and fixing a few compiler warnings.

Tested on:
    Mac OSX/64 10.9.3 w/gcc 4.9.x and parallel w/OpenMPI
    (h5commttest forthcoming)
2014-06-13 01:23:57 -05:00
Allen Byrne
c2bc22d51c [svn-r25266] update to m4 1.4.17 in reconfigure did not change any other files 2014-06-12 14:54:44 -05:00
Allen Byrne
d74b7fb7b8 [svn-r25261] limit vfd flush1 test time 2014-06-11 14:23:00 -05:00