Commit Graph

34 Commits

Author SHA1 Message Date
jhendersonHDF
ea3b6fd12b
Fix usage of h5_clean_files in t_pflush2.c (#3807) 2023-10-31 06:05:25 -07:00
Scot Breitenfeld
a87ca572fe
Replaces HDgetenv with getenv (#3599) 2023-09-26 13:11:22 -07:00
Dana Robinson
44a00ef876
Strip HD prefix from string/char C API calls (#3540)
* Strip HD prefix from string/char C API calls

* HD(f)(put|get)(s|c)
* HDstr*
* HDv*printf
* HD(s)(print|scan)f
* HDperror

But NOT:

* HDstrcase*
* HDvasprintf
* HDstrtok_r
* HDstrndup

As those are not C99 and have portability work-around
implementations. They will be handled later.

* Fix th5_system.c screwup
2023-09-15 15:13:18 -07:00
Dana Robinson
fd933f30b1
Remove programmer/date from comments (#3210)
* Removes Programmer: and Date: fields
* Fixes a few Modifications: fields leftover from previous work
2023-06-29 12:13:29 -07:00
Dana Robinson
9f430d15b0
Rename HDexit() and related to exit(), etc. (#3202)
* HDatexit
* HDexit
* HD_exit
2023-06-29 08:18:01 -07:00
Dana Robinson
aebac33a1f
Remove HD from memory allocate/free calls (#3195)
* HDcalloc
* HDfree
* HDmalloc
* HDrealloc
2023-06-28 15:48:12 -07:00
Dana Robinson
187ea8a9ae
Rename HD(f)printf() to (f)printf() (#3194) 2023-06-28 08:31:32 -07:00
Dana Robinson
7a44581a84
Rename HDassert() to assert() (#3191)
* Change HDassert to assert

* Fix bin/make_err
2023-06-28 07:31:56 -07:00
Sean McBride
65d8c93470
Many fixes to various compiler warnings (#3124)
* Fixed various -Wmissing-variable-declarations by adding static keyword
* In a few cases, renamed the variable suffix from _g to _s.
* Fixed some -Wmissing-variable-declarations by using different declaration macros
* Fixed various -Wconditional-uninitialized warnings by just initializing variable to zero
* Fixed various -Wcomma warnings
* Fixed clang -Wstrict-prototypes warnings
* Fixed various -Wunused-variable warnings
* Updated some casts to fix the only 3 -Wcast-qual warnings
* Fixed the only -Wsometimes-uninitialized warning
2023-06-18 22:13:38 -07:00
Sean McBride
68eba3da69
Many clang -Wextra-semi-stmt fixes (#2537)
* Adds semicolons to function-like macros
* Adds a do..while(0) loop to some macros
* Removes semicolons when inappropriate, especially H5E_TRY_BEGIN/END
2023-06-15 21:49:02 -07:00
Larry Knox
11dfa25910
Update copyright headers (#2184)
* Updated source file copyright headers to remove "Copyright by the Board of Trustees
of the University of Illinois", which is kept in the top-level COPYING file.
2022-11-01 16:02:27 -05:00
Dana Robinson
838d050a63
h5test.h testing macros get enclosed in do..while loops (#1721)
* h5test.h testing macros get enclosed in do..while loops

* Adds missed macro in hl C++ code

* Fixes macro in Windows code
2022-05-04 08:49:01 -07:00
jhendersonHDF
2ba7a01bff
Fix some const cast and stack/static object size warnings (#1700)
* Fix various warnings

* Move HDfree_const to H5private.h for wider use

* Print output from all ranks in parallel tests on allocation failure

* Move const pointer freeing macro to h5test.h for now
2022-05-01 15:54:41 -05:00
Sean McBride
4ac6ccc021
Snprintf2 (#1399)
* Replaced many uses of sprintf with safer snprintf

Many very straightforward, but in a few cases added a length parameter to some private functions, because buffer length was otherwise unknowable.

* Removed unnecessary use of static on small buffers

This improves thread safety.

* Committing clang-format changes

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2022-01-28 16:43:48 -06:00
jhendersonHDF
3da0802c40
VFD plugins (#602)
* Implement support for loading of Virtual File Drivers as plugins

Fix plugin caching for VOL connector and VFD plugins

Fix plugin iteration to skip paths that can't be opened

* Enable dynamic loading of VFDs with HDF5_DRIVER environment variable

* Temporarily disable error reporting during H5F_open double file open

* Default to using HDstat in h5_get_file_size for unknown VFDs

* Use macros for some environment variables that HDF5 interprets

* Update "null" and "ctl testing" VFDs
2021-09-29 13:28:12 -05:00
Larry Knox
2ea165efd0
Update license url part2 (#333)
* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
    file - files not in src or test.
2021-02-17 08:52:36 -06:00
Allen Byrne
b2d661b508 Clang-format of source files 2020-09-30 09:27:10 -05:00
David Young
b53eb6fb29 Add semicolons to more PASSED() invocations. 2020-02-28 16:52:22 -06:00
Dana Robinson
d59aa1d75c Cleaned up the parallel flush test and set t_pflush1 to always fail.
Also set CMake to handle this.
2019-01-03 20:45:58 -08:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Quincey Koziol
1023374492 [svn-r27768] Description:
Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.

    This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.

    Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros.  (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)

    Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    Linux/64 3.10.x (kituo) w/serial & parallel
    Linux/64 2.6.x (ostrich) w/serial
2015-09-13 22:58:59 -05:00
Mohamad Chaarawi
0c29ac42cd [svn-r26279] re-commit 26260 that Dana moved out fixing the versioning of functions to work with v16 default API. 2015-02-23 10:14:43 -05:00
Dana Robinson
f634105bdb [svn-r26271] Reverse merge of r26260 which was causing daily test failures.
Tested on: jam w/ parallel and fortran
2015-02-22 03:38:18 -05:00
Mohamad Chaarawi
fcd77ffe7e [svn-r26260] - add an attribute callback to call H5_term_library when MPI_COMM_SELF is destroyed.
- add tests for above.
- this is a fix for HDFFV-883.

tested h5committest
2015-02-20 16:33:48 -05:00
Mohamad Chaarawi
79d94c7bb7 [svn-r26222] call H5close before MPI_Finalize() and close some objects that could be potentially left open. 2015-02-18 16:17:15 -05:00
Quincey Koziol
662892e8b1 [svn-r25928] Description:
Minor code cleanups found while reviewing 'avoid_truncate' changes.

Tested on:
    MacOSX/64 10.10.1 (amazon) w/serial & parallel
    (too minor to require h5committest)
2014-12-29 00:17:22 -05:00
Quincey Koziol
b4ff3e6e79 [svn-r16560] Description:
Remove another call to H5E_clear_stack() from within the library.

    Clean up lots of compiler warnings.

Tested on:
    Mac OS X/32 10.5.6 (amazon)
    (followup on other platforms forthcoming)
2009-03-10 14:00:39 -05:00
Quincey Koziol
bdd7d59902 [svn-r15628] Description:
Remove trailing whitespace from C/C++ source files, with the following
script:

    foreach f (*.[ch] *.cpp)
        sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f
    end

Tested on:
    Mac OS X/32 10.5.5 (amazon)
    No need for h5committest, just whitespace changes...
2008-09-16 10:52:51 -05:00
Quincey Koziol
16683943c6 [svn-r14193] Description:
Make H5Dopen versioned and change all internal usage to use H5Dopen2

	Add simple regression test for H5Dopen1

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-08 14:59:36 -05:00
Quincey Koziol
ea343ef854 [svn-r14115] Description:
Remove all plain calls to H5Gopen() from source, replacing them with
either H5Gopen2().

	Add test for H5Gopen1().

	Reformatted several pieces of code, to clean them up.

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	Solaris/32 5.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-08-28 10:02:54 -05:00
Quincey Koziol
6151c1cd90 [svn-r13650] Description:
Clean up problems from error handling API changes in parallel and
threadsafe builds.

Tested on:
	FreeBSD/64 6.2 (liberty) w/parallel & threadsafe
2007-04-12 16:41:23 -05:00
Albert Cheng
ed7d456e51 [svn-r13253] Updated all C and C++ style source code files with the THG copyright notice.
Tested platform:
Kagiso only since it is only a comment block change.  If it works in one
machine, it should work in all, I hope.  Still need to check the parallel
build on copper.
2007-02-07 09:56:24 -05:00
Leon Arber
9da1caea15 [svn-r12704] Purpose: Bug fix
Description: 
    Fix copper failures by adding MPI_Finalize call and also close the dataset and file in case of failure prior to exiting.
2006-10-02 12:45:53 -05:00
Leon Arber
c7a381b324 [svn-r12697] Purpose: New Feature
Description:
    Preliminary test of H5Fflush to verify that it still works when using MPIO collective mode.

Platforms:
    Linux (heping)
2006-10-01 16:27:47 -05:00