Allen Byrne
27af9a7922
HD prefix and whitespace
2018-08-28 10:54:54 -05:00
Jordan Henderson
556bfd498c
Update MANIFEST file for new t_coll_md_read.c file
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Remove old line from copyright notice
2018-08-27 08:56:17 -05:00
Jordan Henderson
4cd10fa88e
Add fix for HDFFV-10501
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Add test for HDFFV-10501 fix
Add release note for HDFFV-10501 fix
2018-08-25 22:54:30 -05:00
Jordan Henderson
70de0b18e3
Merge pull request #1167 in HDFFV/hdf5 from ~JHENDERSON/hdf5:bugfix/MPI2_only_fixes to develop
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* commit '9aa2eaeb9ed9c94f63973cb55f13de256558497c':
Add Autotools and CMake checks for big I/O MPI-3 functions
Add hdf5settings section for parallel compression status in CMake builds
Switch to CheckSymbolExists in CMake
Add configure check for MPI_Mprobe and MPI_Imrecv functions
2018-08-02 09:25:00 -05:00
Jordan Henderson
d075c0854d
Add quotes to places where MPI_C_LIBRARIES are linked against
2018-07-27 14:58:01 -05:00
Jordan Henderson
e1e10743cf
Add configure check for MPI_Mprobe and MPI_Imrecv functions
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Add line to libhdf5settings file for status of Parallel writes to
filtered datasets status
Surround Parallel Compression code in MPI_VERSION >= 3 checks
Add disabled message for Parallel Compression built w/ MPI-2
Modify Parallel Compression tests to only run the parallel filtered read
tests when parallel filtered writes are disabled
Update big I/O code to handle being built with MPI-2
Add checks to CMakeLists.txt for MPI_Mprobe and MPI_Imrecv
2018-07-26 12:50:26 -05:00
Jordan Henderson
9fe86bc51c
Add test to continually grow and shrink chunks
2018-06-04 13:49:42 -05:00
Jordan Henderson
e2c9f5a27a
Changes to test with checksum filter as well as deflate filter
2018-06-04 10:53:08 -05:00
Jordan Henderson
6e37dff71f
Fix bug in parallel reads of compressed data
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Add remaining parallel compound dataset partial read tests
2018-05-17 11:07:23 -05:00
Jordan Henderson
2c8e6e6304
Add data verification to parallel filtered compound write tests
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Add 3D parallel filtered partial read tests
2018-05-16 20:29:35 -05:00
Jordan Henderson
13f1790851
Add seven of fourteen parallel filtered data partial read tests
2018-05-15 14:12:32 -05:00
Allen Byrne
2347bffaa2
TRILABS-19 remove add_defintions and use generator expressions
2018-04-26 16:41:04 -05:00
Allen Byrne
6c82c49dd5
TRILABS-20 set a compiler name on all project commands
2018-04-20 10:11:55 -05:00
Allen Byrne
46f2a2a432
TRILABS-19 Initial conversion of include_directories to targets
2018-04-17 15:57:58 -05:00
Quincey Koziol
4766d282ff
Corrections for parallel I/O & tests.
2018-03-21 00:09:16 -05:00
Quincey Koziol
d812c6fe60
Cleanup API context function usage.
2018-03-18 22:51:19 -05:00
Quincey Koziol
f38864920d
Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into merge_func_enter_vol
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Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
2018-03-18 18:36:49 -05:00
Quincey Koziol
4a17aff408
Add API context interface and use it throughout the library.
2018-03-15 16:54:30 -05:00
lrknox
4b6d3193e1
Add 2 parallel test files to CHECK-CLEANFILES so that if their tests
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fail before removing them, make check-clean will remove them.
2018-03-15 11:18:47 -05:00
Richard Warren
1a3beaadce
Unify the test (t_bigio.c) between hdf5_1_10 and develop
2018-03-12 16:17:10 -04:00
lrknox
5d7c18fcfc
Remove comparison to NULL for variables to be freed.
2018-03-12 14:10:59 -05:00
lrknox
6a53c14240
Add HDfree of vector, matrix_out and matrix_out1 previously HDmalloced
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in coll_write_test().
2018-03-12 13:47:27 -05:00
Allen Byrne
24c62ba7fe
Change CMake min to 3.10
2018-03-09 12:32:06 -06:00
Allen Byrne
08fc36b0ca
Correct cutnpaste
2018-03-07 12:23:04 -06:00
Allen Byrne
2db84441d7
ifdef around another function
2018-03-06 16:51:31 -06:00
Allen Byrne
b8b0afc4c3
Add #ifdef H5_HAVE_FORK eliminates special handling
2018-03-06 15:41:51 -06:00
Allen Byrne
e5b602fafe
Add #ifdef H5_HAVE_FORK
2018-03-06 15:40:15 -06:00
Richard Warren
c0aafa78e5
Fixed t_pread.c to remove the use of h5jam, etc.. This fixes HDFFV-8839 and should merge into develop
2018-03-02 11:32:13 -05:00
Allen Byrne
bf9b73e877
Remove t_cache_image test on Windows
2018-02-28 09:26:11 -06:00
Allen Byrne
b36bad53d9
Inc CMake min, Add new tests, rework test CMake files
2018-02-27 12:57:07 -06:00
Allen Byrne
205d33f332
Cleanup overuse of include files
2018-02-14 10:08:09 -06:00
Allen Byrne
6ca95c512a
HDFFV-10385 rework java names
2018-01-17 10:27:00 -06:00
Allen Byrne
be42e04791
HDFFV-10385 refactor CMAKE_BUILD_TYPE usage
2018-01-09 09:56:28 -06:00
Allen Byrne
732074d47e
Add library INTERFACE and MPI to tools
2017-12-28 16:30:51 -06:00
Richard Warren
0d2fd7ae0c
Make a fix to allow CMake testing which does not use relative directories.
2017-11-02 12:33:08 -04:00
Allen Byrne
f8fd6d0b41
Correct usage of MPI vars
2017-11-01 13:41:44 -05:00
Richard Warren
8a391887be
Merge pull request #711 in HDFFV/hdf5 from optimize_superblock_read to develop
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* commit '9aada2bdb51f1c235e483f2bce109262bfbe22fa':
in 'production' mode builds
Make fixes to avoid test failures in 'production' mode builds
2017-10-18 06:21:33 -05:00
Richard.Warren
9aada2bdb5
in 'production' mode builds
2017-10-17 15:34:36 -05:00
Richard.Warren
c230ffa268
Make fixes to avoid test failures in 'production' mode builds
2017-10-17 15:23:54 -05:00
Richard Warren
0c207cd2f8
Merge pull request #704 in HDFFV/hdf5 from optimize_superblock_read to develop
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* commit '3dde6d0e32461f46630f814a2fdfbd4c813703bf':
Updated the code and RELEASE.txt note per comments from John Mainzer
Try to address most of the issues raised by Dana in the code review
Made edits suggested by John as part of the code review
Update the MANIFEST and release_docs/RELEASE files
Add a test for parallel reads of independent files using MPI subgroups
Edits to the file open optimization and associated test code to bring them closer to the HDF5 library's unwritten coding standards. Also bug fix to repair a hang in testphdf5.
The initial coding for the superblock read optization
2017-10-13 07:58:46 -05:00
Richard Warren
3dde6d0e32
Updated the code and RELEASE.txt note per comments from John Mainzer
2017-10-11 16:22:50 -04:00
Richard Warren
157398107e
Try to address most of the issues raised by Dana in the code review
2017-10-11 13:40:54 -04:00
Richard Warren
9849d61344
Made edits suggested by John as part of the code review
2017-10-11 10:15:33 -04:00
Richard Warren
837624b9cd
Add a test for parallel reads of independent files using MPI subgroups
2017-10-09 16:47:21 -04:00
M. Scot Breitenfeld
45192768ad
fixed missing prototype warning
2017-10-09 11:30:10 -05:00
M. Scot Breitenfeld
c643b13594
removed always true ifdef
2017-10-09 11:19:20 -05:00
mainzer
ceab5a5176
Edits to the file open optimization and associated test
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code to bring them closer to the HDF5 library's unwritten
coding standards. Also bug fix to repair a hang in testphdf5.
Tested parallel/debug on Charis and Jelly, parallel/production on Jelly.
2017-10-05 17:25:57 -05:00
Richard Warren
81094ac3cf
The initial coding for the superblock read optization
2017-09-28 16:27:29 -04:00
Jordan Henderson
b61bb248cd
Amend CMakeLists.txt to add t_filters_parallel to CMake
2017-09-15 07:57:40 -05:00
Jordan Henderson
b95986e50d
Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~jhenderson/hdf5.git into develop
2017-09-01 12:47:12 -05:00
