Commit Graph

41 Commits

Author SHA1 Message Date
Elena Pourmal
ea66068977 [svn-r10970] Purpose: New feature/bug #350 fix
Description:
             When compiler flag was used to set the size of Fortran integer
             to 8 bytes, library would fail.

Solution:
             Cleaned up the code; added detection of Fortran INTEGER type size
             and appropriately defined int_f type for C-stubs routines.

Platforms tested:
             Solaris 2.8 32 and 64-bit, AIX 5.1 64-bit parallel
             PGI Fortran with -i8 flag on heping
             Absoft Fortran with -i8 flag on heping
             g95 on mir (Fortran integer is 8 bytes by default that cannot be
                         changed - compiler bug ;-)
             AIX Fortran with -qintsize=8 32 and 64-bit modes on copper

Misc. update:
2005-06-22 13:23:21 -05:00
Albert Cheng
65107926e1 [svn-r10858] Purpose:
bug fix.

Description:
The check-s and check-p targets are not recursively passes down.
Make them so.

Platforms tested:
heping (serial and pp).
2005-06-04 00:01:12 -05:00
Albert Cheng
a2217d58c8 [svn-r10849] Purpose:
bug fix

Description:
check-s and check-p were set as pre-requistics of test.  They
would get executed in parallel if parallel make is used.  This
could cause problems since serial tests are used to be executed
before parallel tests. It is not known if it is always okay to
run serial and parallel tests in simultantously.

Solution:
Change check-s and check-p as actions of the target test so
that they get executed sequnentially.

Platforms tested:
heping PP.
2005-06-02 18:42:48 -05:00
James Laird
2423bd6cab [svn-r10840] Purpose:
Added check-s and check-p targets.

Description:
Added check-s and check-p targets to 1.7 branch to match changes to 1.6
branch.  Now parallel and serial tests can be run separately.

Platforms tested:
mir, modi4, copper
2005-06-01 20:51:52 -05:00
Pedro Vicente Nunes
5b6c08e68e [svn-r10747] Purpose:
bug fix

Description:
the fortran type integer*1 has become not portable.
define the image fortran datatype as "integer" and make special save, read, and palette functions
that use native integer for a memory type and UCHAR as disk type for the image data
added some more tests with new palette definitions

Solution:

Platforms tested:
linux
solaris

Misc. update:
2005-05-16 14:08:41 -05:00
MuQun Yang
117c3740b5 [svn-r10706] Purpose:
bug fix

Description:
When using memcpy on windows, <string.h> needs to be included.

Solution:
include <string.h>

Platforms tested:
MSVS 6.0 on windows XP, too minor to test with three platforms.

Misc. update:
2005-05-02 10:58:17 -05:00
James Laird
9cab0a1273 [svn-r10668] Purpose:
Bug fix

Description:
Removed hdf5/hl/fortran/src/H5f90i.h from CVS.
HL APIs should now include hdf5/fortran/src/H5f90i.h
2005-04-26 13:11:58 -05:00
James Laird
139c899ba1 [svn-r10667] Purpose:
Bug fix

Description:
Made High-Level Fortran code use automatically generated headers
rather than a separate hardcoded header.

Solution:
Set hdf5/hl/fortran/src to include hdf5/fortran/src, so that it
will find the copy of H5f90i.h in that directory.
Took #include "H5private.h" out of H5f90i.h (and moved it to files
that included H5f90i.h.

Platforms tested:
mir, modi4, pommier
2005-04-26 13:10:31 -05:00
James Laird
151757f989 [svn-r10571] Purpose:
Improvement

Description:
Changed headers in Fortran directories to use H5_FC_FUNC macro
from H5pubconf.h rather than FC_FUNC macro from H5config.h.
This is better practice and works better with the Windows projects.

Platforms tested:
heping, Windows
2005-04-07 14:56:06 -05:00
Elena Pourmal
5279827823 [svn-r10570] Purpose: Maintenance
Description: Removed support for SRB driver

Solution: Removed or modified appropriate files; ran reconfigure
          to regenerate Makefile.in and configure files.

Platforms tested: heping and shanti

Misc. update: ran bin/chkmanifest on heping
2005-04-07 14:41:25 -05:00
James Laird
f49f2ce0b8 [svn-r10541]
Purpose:
Bug fix

Description:
FAIL was being doubly defined in high-level fortran directory.
Removed inclusion of H5private.h from H5f90i.h in hl/fortran/src.

Platforms tested:
copper
2005-04-05 12:30:50 -05:00
James Laird
b296a419c4 [svn-r10534] Purpose:
Configuration feature

Description:
Different Fortran compilers mangle function names in different ways
(upper case, lower case, adding underscores).  To link between
Fortran and C functions, we need to know what a given function's
name is under a given compiler.

Solution:
Use autoconf's FC_WRAPPERS check to determine the Fortran
naming scheme and define the FC_FUNC_ macro to name our
functions (in H5f90proto.h).  Removed references to
our old FNAME macro, as well as flags that indicated whether
function names were upper or lower case.

Platforms tested:
mir, pommier, modi4, copper, more
2005-04-04 16:17:51 -05:00
James Laird
59ec5b3d66 [svn-r10517] Purpose:
Bug fix

Description:
On some machines, $RUNSERIAL variable needs to be used to run
tests.  Set $RUNTESTS (which is used for non-parallel tests) to
be $RUNSERIAL in configure.am.

Also, since I was updating all Makefiles.in anyway, I updated
commence.am to point to autotools installs in AFS instead of
those on heping.

Platforms tested:
mir, sleipnir, modi4, copper
2005-03-31 13:26:17 -05:00
James Laird
14e06e81cb [svn-r10511]
Purpose:
"Bug fix"

Description:
Hardcoded Makefiles to use /bin/sh instead of letting configure
detect shell automatically.  This is what v1.6 does, and avoids
problems on janus.

Platforms tested:
sleipnir, copper, modi4, mir
2005-03-30 16:14:48 -05:00
James Laird
7acf3f1b12 [svn-r10475] Purpose:
Feature - conditional compilation

Description:
SRB file driver and tests are now compiled only when SRB is enabled
(using --with-srb during configure).

Solution:
Added an automake conditional in configure.in, altered Makefiles.am in
src and test directories to depend on that conditional.
This should make a nice example for posterity to add conditionally
compiled sources.

Platforms tested:
heping (only configure change)
2005-03-29 12:38:17 -05:00
James Laird
9452992c09 [svn-r10459]
Purpose:
Added C++ wrapper for Packet Table API.

Description:
Added macro for high-level C++ library (LIBH5CPP_HL), which changes every
Makefile.in.
Added directories for high-level C++ library (though currently only Packet
Table API is supported).
Added both C++ source and tests.

Platforms tested:
sleipnir, mir, modi4

Misc. update:
2005-03-28 11:32:20 -05:00
James Laird
25df1908bc [svn-r10158] Purpose:
Automake version upgrade

Description:
Upgraded automake version from 1.6.2 to 1.9.5.
Changed bin/reconfigure script to use automake 1.9.5.
Changed configure.in and Makefiles to use new FCFLAGS and FC variables
instead of FFLAGS and F9X.
Automake and configure should now do the lion's share of the work
supporting Fortran 9X; macros in acsite.m4 are now mostly unused (will
be cleaned later).
Altered how configure handles pmake; now root-level Makefile.in is
processed by bin/reconfigure to have a .MAKEFLAGS target, since
automake no longer allows us to define unused variables.
Configure now always checks for C++ compiler even if it is not
used, since automake thinks this is the Right Thing To Do and
will break otherwise.

Platforms tested:
Sol, copper, heping, mir, sleipnir, eirene, pommier, kelgia, modi4.
2005-03-07 12:57:27 -05:00
Albert Cheng
0d514907a9 [svn-r10123] Purpose:
Removed GASS configuration and software packages associated with
it.  The following software are no longer configurable.

checking for main in -lcrypto... yes
checking for SSL_get_version in -lssl... yes
checking globus_common.h usability... yes
checking globus_common.h presence... yes
checking for globus_common.h... yes
checking for globus_module_activate in -lglobus_common... yes
checking for main in -lglobus_gass_cache... yes
checking for main in -lglobus_gaa... yes
checking for main in -lglobus_gss... yes
checking for main in -lglobus_gss_assist... yes
checking for main in -lglobus_io... yes
checking for main in -lglobus_gass_transfer_assist... yes
checking for main in -lglobus_gass_transfer... yes
checking for globus_gass_open in -lglobus_gass_file... yes

Platforms tested:
h5committested (but copper was down.) tested in modi4 too.
2005-03-02 15:02:55 -05:00
James Laird
5b4232e9d1 [svn-r10107] Purpose:
Bug fix

Description:
Fortran builds were dying with unknown flags.

Solution:
Fortran builds should be static, not shared.  Static flags had been specified
for libraries, but apparently were also needed for executables.
Solved problem by adding static flag to everything in fortran directories.

Platforms tested:
mir, eirene
2005-02-28 17:54:17 -05:00
James Laird
d7883f21bf [svn-r10098] Purpose:
Bug fix

Description:
Some machines and compilers were having trouble creating fortran libraries
as shared libraries.

Solution:
Added flag in Makefiles.am to create fortran libraries as shared libraries.
(This is how HDF5 was set up before automake changes; I forgot to add
these flags, and it didn't cause a problem until now.)

Platforms tested:
sleipnir, eirene, verbena

Misc. update:
2005-02-26 17:28:23 -05:00
James Laird
0b83fea125 [svn-r10066] Purpose:
Libtool upgrade

Description:
HDF5 was using libtool 1.4.2.  Upgraded to libtool 1.5.14.

Platforms tested:
verbena, heping, pommier, copper, modi4, arabica
2005-02-23 11:47:00 -05:00
Xiaowen Wu
065fe7bb71 [svn-r10023] Purpose:
New feature.

Description:
    Add the scaleoffset internal library filter.

Solution:

Platforms tested:
    heping, copper, arabica

Misc. update:
2005-02-16 21:52:21 -05:00
James Laird
8ed95c0011 [svn-r10016]
Purpose:
Bug fix

Description:
modi4 dies during build with strange errors.
The root cause of these is a two-year-old hack in HDF5's libtool
script that only takes effect on IRIX.

Solution:
Edited the libtool hack (by editing ltmain.sh) to correct a bug in
the hack.
Also made sure that compiler-specific DEFAULT_LIBS are used
when linking.

Platforms tested:
sleipnir, copper, modi4, sol
2005-02-16 14:27:27 -05:00
James Laird
3f0a35a4ea [svn-r9988] Purpose:
Bug fix

Description:
pmake (on modi4, for instance) complains about undefined variables
if it is run without the -V flag, which turns those errors to warnings.

Solution:
Added test to configure.in to see if $MAKE will allow Makefiles
with undefined variables.  If not, sets -V flag in AM_MAKEFLAGS.
Ensured that all custom make targets use AM_MAKEFLAGS.
Also defined all variables that caused errors in top-level Makefile.am.
This means that pmake can be used to build hdf5 *from the top level
only*.  To run make from a subdirectory, still need to use -V flag
(or use make or gmake).

Platforms tested:
modi4, heping, copper, sleipnir
2005-02-11 12:40:52 -05:00
Quincey Koziol
a6ceeb8055 [svn-r9981] Purpose:
Code cleanup

Description:
    Clean up some test files.

Platforms tested:
    FreeBSD 4.11 (sleipnir) w/FORTRAN
    Too minor to require h5committest
2005-02-10 16:24:22 -05:00
Quincey Koziol
674752ab7d [svn-r9977] Purpose:
Update port

Description:
    Allow FreeBSD builds to use Intel C & F90 compilers (C++ is not working
yet on FreeBSD, so that'll come along later)

Platforms tested:
    FreeBSD 4.11 (sleipnir) w/Intel C & F90 compilers
    Does not affect other platforms...

Misc. update:
2005-02-10 08:30:36 -05:00
James Laird
093515817b [svn-r9952] Purpose:
Bug fix

Description:
Typo in /hl/fortran/src Makefile.am caused obtuse compiler complaints from
some compilers (but not others).
Errors were of the form:
gcc: cannot specify -o with -c or -S and multiple compilations

Solution:
In AM_CLFAGS, missed -I before ../../hl/src.  This made gcc think that we
also wanted to compile /hl/src directory.  Fixed error by adding -I.

Platforms tested:
verbena, eirene.
2005-02-07 12:59:42 -05:00
James Laird
db2575baa9 [svn-r9930]
Purpose:
Bug fix

Description:
Parallel builds were breaking in tools/lib

Solution:
talign didn't realize it depended on libh5tools.la because its
dependencies listed the full path (../../tools/lib/libh5tools.la).
Changed this, and made similar changes in a couple of other
directories.
This checkin should also add the --foreign flag to every Makefile.in

Platforms tested:
sleipnir (minor change)
2005-02-03 16:59:40 -05:00
Quincey Koziol
0b332ace5e [svn-r9928] Purpose:
New feature

Description:
    Add basic code for new B-tree implementation.  They don't do much yet,
aren't hooked up to anything yet and the format may change, but I'd like to
start getting them into the daily tests.

Platforms tested:
    FreeBSD 4.11 (sleipnir) w/parallel
    Too minor to require h5committest
2005-02-03 14:59:05 -05:00
James Laird
ab243bf369 [svn-r9920] Purpose:
Bug fix

Description:
Found the permanant fix to automake/CVS dependency problem

Solution:
Added AM_MAINTAINER_MODE macro to configure.in.
Now automake will never try to regenerate Makefiles, Makefiles.in,
configure, H5config.h, etc. when they are out of date, nor will it
print any warnings.
Developers should  be very very careful to use reconfigure script,
and can add --enable-maintainer-mode flag to configure on heping
to regenerate these files correctly.

Platforms tested:
heping sleipnir copper
2005-02-02 15:59:46 -05:00
James Laird
ed8685acd2 [svn-r9915] Purpose:
Bug fix

Description:
Configuration files' timestamps were incorrect.

Solution:
Update Makefiles.in.  Also added correct paths to autotools on heping,
so heping build should be able to re-generate configuration files even
if they are still broken.

Platforms tested:
sleipnir
2005-02-02 11:00:36 -05:00
James Laird
e3dacb31be [svn-r9912] Purpose:
Bug fix

Description:
Dependencies between configure files (aclocal, configure.in, configure,
Makefiles.am and .in) are still causing Makefiles to try to run autotools
during build.

Solution:
Committed all Makefiles.in to update their timestamps.
As a temporary measure, forcibly prevented automake from running
autotools during build by redefining the variables it uses.

Platforms tested:
sleipnir (No changes to Makefile content)
2005-02-01 16:05:33 -05:00
James Laird
30bfb1e0ea [svn-r9907] Purpose:
Bug fix

Description:
Different compilers use different flags to include Fortran module files

Solution:
Changed boilerplate to use configure variable rather than hardcoded -M flag.

Platforms tested:
sleipnir, sol, copper
2005-02-01 10:27:37 -05:00
James Laird
7e28ae7b47 [svn-r9904] Purpose:
Configuration update

Description:
HDF5 now uses automake

Solution:
Ditto to previous checkin
2005-01-31 22:20:11 -05:00
Pedro Vicente Nunes
82e29e9369 [svn-r9882] Purpose:
bug fix
I forgot to change the name to "H5TB.h" in this file


Description:

Solution:

Platforms tested:
none

Misc. update:
2005-01-29 00:38:27 -05:00
Elena Pourmal
c1df1b3ea4 [svn-r9857] Purpose: Maintenance
Description: Removed PABLO from the source

Solution:

Platforms tested: arabica with 64-bit, copper with parallel,
                  heping with GNU C and C++ and PGI fortran (but
                  I disabled hl, there is some weird problem only
                  on heping: F9XMODFLAG is not
                  propagated to the Makefile files

Misc. update:
2005-01-21 20:16:57 -05:00
Elena Pourmal
a067f22345 [svn-r9835] Purpose: Bug fix/enhancement
Description: Fortran module search directories included ../src and
             ../../fortran/src directories; this was defined in
             acsite.m4 file in order for fortran and HL fortran tests
             to compile. Those flags were included in h5fc and h5pfc scripts.

Solution: Removed those directories from acsite.m4 file and updated
          Makefile.in files.

Platforms tested: sequential on arabica and parallel on copper
                  including HL Fortran

Misc. update:
2005-01-18 20:57:44 -05:00
Quincey Koziol
427ff7da28 [svn-r9727] Purpose:
Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-)

Description:
    Generally speaking, this is the "signed->unsigned" change to selections.
However, in the process of merging code back, things got stickier and stickier
until I ended up doing a big "sync the two branches up" operation.  So... I
brought back all the "infrastructure" fixes from the development branch to the
release branch (which I think were actually making some improvement in
performance) as well as fixed several bugs which had been fixed in one branch,
but not the other.

    I've also tagged the repository before making this checkin with the label
"before_signed_unsigned_changes".

Platforms tested:
    FreeBSD 4.10 (sleipnir) w/parallel & fphdf5
    FreeBSD 4.10 (sleipnir) w/threadsafe
    FreeBSD 4.10 (sleipnir) w/backward compatibility
    Solaris 2.7 (arabica) w/"purify options"
    Solaris 2.8 (sol) w/FORTRAN & C++
    AIX 5.x (copper) w/parallel & FORTRAN
    IRIX64 6.5 (modi4) w/FORTRAN
    Linux 2.4 (heping) w/FORTRAN & C++


Misc. update:
2004-12-29 09:26:20 -05:00
Quincey Koziol
1205c57531 [svn-r9682] Purpose:
Bug fix

Description:
    Add @COMMENCE@ to makefile, so that all our predefined macros are included,
which makes 'make distclean' work

Platforms tested:
    FreeBSD 4.10 (sleipnir)
    Too minor to require h5committest
2004-12-16 21:22:27 -05:00
Pedro Vicente Nunes
2fb49109c4 [svn-r9645] Purpose:
bug fix

Description:
the makefile was not using the $(srcdir) on some library path

Solution:

Platforms tested:

Misc. update:
2004-12-08 15:50:25 -05:00
Pedro Vicente Nunes
dd7c794469 [svn-r9644] Purpose:
add hl fortran

Description:

Solution:

Platforms tested:
linux (absfot and pgf90)
solaris (32 and 64 bit)
AIX

note : HP gives a compiling error , to be fixed in the future

Misc. update:
2004-12-08 15:31:25 -05:00