new feature
Description:
Added a new option -nocvs for no cvs commands.
Added a locking mechanism to show CVS checkout in progress
and other hosts should wait till it is done.
Platforms tested:
gondolin
Code improvement
Description:
Changed it so that $H5VERSION determines which version of hdf5
code to do cvs checkout and to test, making it easier to handle
new versions.
Platforms tested:
run simple test to make sure it did generate the right command.
Bug fix
Description:
Updated its default H5DIR value to the correct version branch
it is in now.
Platforms tested:
Will be tested by the daily test cron job.
New feature
Description:
Added a -debug line option and will pass it to other runtest invoked.
Removed the restriction of running one test per host. This way,
tests of different tests (e.g., with or without fortran) can be
run per host with all output saved in one log file.
Platforms tested:
Tried several runs of daily test.
Bug fix (feature)
Description:
It did not recognize the op-configure keyword as a possible
type of test.
Solution:
Added the feature to handle op-configure.
Platforms tested:
Linux, freebsd.
Bug fix, feature, cleaning code
Description:
It could not find bin/locate_hdf5.
Solution:
Explicitedly use the bin/locate_hdf5 in the snapshots/current area.
Also, added Usage page to be printed when -h(elp) is asked or when
there is error in command option.
Cleaned some old code no longer used.
Platforms tested:
eirene
Automatically update the HISTORY.txt and RELEASE.txt to in doc/html/ADGuide
by copying the same files at the top level to them. This keeps the two
files updated right before release.
Platforms tested:
eirene.
new feature
Description:
It now reads a configuration file ($HOME/snapshots-hdf5/snaptest.cfg)
to set up the configure options of the tests, and what type of tests
to run for each host.
Platforms tested:
Eirene launched a full blown test on all machines involved in the
daily test.
Simple twist
Description:
snapshot used to just use whatever `hostname` returns. Often it
is the fully qualified name but sometimes just hostname without the
domain part. Inconsistent.
Solution:
Chopped off any domain part and use just the host name.
Use the 'cut' command rather than the sed with ncsa.uiuc.edu hardcoded.
Applied that to runtest too.
Platforms tested:
Should work. Will find out if the daily tests still work.
New Feature
Description:
It supports a configure file (snapshots.../snaptest.cfg).
Currently, it recognize comment lines (started with #)
and the standard configuration.
Platforms tested:
Eirene (Linux)
feature
Description:
Use the external locate_hdf4 instead of the internal function to
find the HDF4 software. Also set PATH to include the HDF4 bin
if found. That would help gurantee access to the 'hdp' tool.
(Need to do an explicite "export PATH" since DEC OSF1 sh does not
seem to export the changed value by default.)
Platforms tested:
Gondolin (DEC OSF1)
feature
Description:
revised it so that it can really run the snapshot tests.
It now first update the source in the snapshot area and then uses
the scripts in snapshot/current/bin.
Platforms tested:
modi4, arabica
New feture
Description:
# Try to locate the HDF (nicknamed hdf4) software
# This is a hack because there is no consistent place to find
# the valid HDF library.
# Usage: locate_hdf5
# It prints two strings in which the first one represents a valid
# value for the --with-hdf=... switch and the second one is where
# one can find the hdp command. It can be added to the $PATH.
Platforms tested:
Pecos (solaris 5.7)
New feature
Description:
This runs the hdf5 library testing via the snapshot script. Without
any argument, it runs the test for the current host. If -all is used,
it runs the tests on a predefined list of hosts.
Platforms tested:
This does not quite work yet as there are a few hardcoded pathnames
to find the script on remote machines. Committing it now to hold
the place so that others can see how it works.
Improvement
Description:
The -i option used to increment the first number it finds in the
SUBRELEASE string. So, beta1-post0 becomes beta2-post0.
Solution:
Changed to increment the last number it finds. So,
beta1-post0 becomes beta1-post1.
Platforms tested:
eirene and modi4.
Major Hack (tm)
NOTE! When upgrading ltconfig in the future, this may have to be
re-fixed!!!
Description:
Pacific Blue didn't like the ``-b nolibpath -b libpath:...''
flags libtool was handing it. It looks as if those flags would
make mpicc forget where some of the libraries it needed were.
Solution:
Test the hostname to determine if we're at pacific.llnl.gov. If
so, then we don't want those flags.
Platforms tested:
Pacific Blue...
The last commited version of config.guess and config.sub does not
have the local changes we made over the time. Thus configure failed
in non-standard machine like the ASCI Red.
Solution:
Replaced them with the last version before the last committed version.
Platforms tested:
ASCI Red
Keeping up with the Jones's
Description:
Updated to latest version of the config.guess and config.sub scripts from
the GNU ftp site, even though the copies in this branch of the library
are OK with the new compiler on the Linux box.
Platforms tested:
Linux (eirene) & FreeBSD 4.1.1 (hawkwind)
Fix Irix pmake bugs
Description:
Build fails on Irix when builddir != srcdir
Solution:
* acconfig.h
* src/H5config.h.in [REGENERATED]
Added definition for HAVE_STREAM
* config/conclude.in
* config/depend1.in
* config/depend2.in
* config/depend3.in
* config/depend4.in
The `Dependencies' file is located in the source
tree. This fixes bugs for Irix pmake when compiling
outside the source tree. Hopefully it still preserves
Albert's changes which allow concurrent compilations
to not stomp on each other's Dependencies files.
* examples/Dependencies [REGENERATED]
* src/Dependencies [REGENERATED]
* test/Dependencies [REGENERATED]
* tools/Dependencies [REGENERATED]
Regenerated for testing purposes.
Platforms:
i686-pc-linux
mips-sgi-irix6.5
sparc-sun-solaris2.6
Added the H5FD_stream_fapl_t type to the TypeString mapping table.
Description:
This servers for proper substitution of the H5TRACE macros in the
Stream VFD sources.
Platforms:
All platforms.
applied for various platforms which weren't supported by libtools are now
standard for libtools it seems. There were only a few of the previous
fixes I rolled forward (the diffs follow):
config.sub:
750a760,763
> tflop*)
> basic_machine=i386-intel
> os=-osf1
> ;;
ltmain.sh:
2911c2911
< $shlibpath_var=\"$temp_rpath\$$shlibpath_var\"
---
> $shlibpath_var=\"$finalize_shlibpath$temp_rpath\$$shlibpath_var\"
option. A system may have several versions of diff (e.g., vendor's
and Gnu's). Added codes to try them all until finding one that supports
it. If found, use it; else stick with plain "diff" and may waste time
when there are no differences besides the ignorable patterns.
Platforms tested:
Solaris 2.7, Redhat 6.2
a complete file name. This distinguish file ./config/unicos from
./config/unicosmk.
Tossed in a cleanup feature by removing the temporary file when finished.
Version numbers include an annotation string consisting of a
sequence of letters and digits and is printed by this
script as either:
1.2.3-pre4
version 1.2 release 3 (pre4)
Other tools should print version numbers similarly.
A `-i annot' switch was added to increment the
annotation (the first subsequence of digits is what is
incremented, e.g., `pre9' becomes `pre10').
The `-i' switch (with no argument) was changed to
increment the annotation string if present, or the
release number otherwise.
(By the way, it actually took about 30 minutes ;-)
so that it is the same as the released version and allows easy
appendix of version number. For the development branch, $H5VERSION
is just "hdf5", representing the current version of the main=truck.
srcdirname <dir>:
Use <dir> as the srcdir testing directory if srcdir is choosen.
If <dir> starts with '-', it is append to the default name
E.g., "snapshot srcdir srcdirname -xx" uses hostname-xx
[Default is hostname]
op-configure <option>:
Pass <option> to the configure command
Configuration improvement
Problem:
Arabica has a zlib library that is a dynamic lib in /usr/ncsa/lib.
Binary generated would fail to run with a missig libz.so complain
if /usr/ncsa/lib is not in $LD_LIBRARY_PATH. This exposed the
problem that if the binary is linked with -L$mylibpath -lxyz
where libxyz is a dynamic type, the binary can't run if $mylibpath
is not in $LD_LIBRARY_PATH (or equivalent) or as part of the
system default library paths (e.g., /usr/lib, /usr/local/lib).
This problem also caused failures during configure (when trying
to see what format to print long long) and during H5detect.
The base cause is because libtool does not "transfer" the
knowledge of -L$mylibpath to the wrapper file its mode=link
generates.
Solution:
bin/ltmain.sh:
Changed it so that it transfers the libpaths from -Llibpaths
to the wrapper generated. I used the already defined variable
finalize_shlibpath. Not sure it is correct to use it this way.
Need to check on this.
configure.in:
Put in a patch to transfer information from LDFLAGS to LD_LIBRARY_PATH
right before the AC_TRY_RUN. The above fix for ltmain.sh does not
work here because libtool is generated later than this point.
There should be a cleaner way to do this.
Removed the hardcode of NCSA_LT_LINK_EXE because it is no longer
needed.
commence.in:
Removed the hardcode of NCSA_LT_LINK_EXE because it is no longer
needed.
Makefile.in:
Another patch of LDFLAGS to LD_LIBRARY_PATH because I could not
make it to generate H5detect in the wrapper form of libtool.
Need to make it to use the libtool correctly. Later.
Platform tested:
arabica (solaris 2.7)
baldric (solaris 2.6)
hosts. Below is the help output for srcdir.
srcdir: Use srcdir option (does not imply other commands)"
"snapshot srcdir" is equivalent to "snapshot srcdir all"
"snapshot srcdir checkout" is equivalent to "snapshot checkout"
Also used shell variables to hold directory paths for easier maintenance.
** bin/rpmsync
** config/depend1.in
Tweaks for versions of `make' that can't search directories.
** examples/Dependencies
** src/Dependencies
** test/Dependencies
** testpar/Dependencies
** tools/Dependencies
Regenerated all these with more complete path names.
----------------------
./MANIFEST
./configure.in
./configure [REGENERATED]
Added more checking for `make' features.
./Makefile.in
./doc/Makefile.in
./doc/html/Makefile.in
./doc/html/Tutor/Makefile.in
./examples/Makefile.in
./pablo/Makefile.in
./src/Makefile.in
./test/Makefile.in
./testpar/Makefile.in
./tools/Makefile.in
./config/commence.in
./config/conclude.in
./config/depend.in [REMOVED]
./config/depend1.in [NEW]
./config/depend2.in [NEW]
./config/depend3.in [NEW]
./config/depend4.in [NEW]
./config/dependN.in [NEW]
The directory search stuff was moved into commence.in, thereby
shortening the Makefile.in prologues.
./doc/html/Dependencies [NEW]
./doc/html/Tutor/Dependencies [NEW]
./examples/Dependencies [NEW]
./src/Dependencies [NEW]
./test/Dependencies [NEW]
./testpar/Dependencies [NEW]
./tools/Dependencies [NEW]
The `.distdep' files were all renamed to `Dependencies' to make them
more obvious. They are required (but may be empty) in every directory
that has a Makefile.in that ends with @CONCLUDE@ (you'll get an
obvious error from make if you forgot to create one).
./bin/trace
./src/H5.c
Added H5E_major_t and H5E_minor_t although tracing only prints the
integer value.
./src/H5E.c
./src/H5Epublic.h
Added tracing information.
./src/H5FDcore.c
./src/H5FDfamily.c
./src/H5FDgass.c
./src/H5FDmpio.c
./src/H5FDsec2.c
./src/H5FDstdio.c
Fixed places where FUNC_LEAVE() evaluated it's argument more than
once.
Added tracing information.
Wrapped long lines.
./config/gnu-flags
Fixed a syntax error when we don't have a gnu compiler.
----------------------
./configure.in
./src/H5config.h.in [REGENERATED]
The /usr/ncsa/{include,lib} directories are only added if they
actually exist. This fixes a warning on some systems.
Checks for the <pdb.h> header file and also for either the PDB or Silo
library, and if found prepares to compile the pdb2hdf program.
./config/distdep
Relative path names for include files are changed to base names since
the makefile contains the logic for searching and since it's likely
that building the .distdep files happed from a location other than
where they would be used in the file system.
./config/conclude.in
Fixed shell errors when `for' loops iterate over nothing for the
`uninstall' target.
./src/H5D.c
./src/H5Oefl.c
File names for the external files are added to the heap when the
dataset is created instead of when the object header is written. This
fixes a rare infinite recursion bug.
./src/H5FD.c
./src/H5FDpublic.h
Optimization to the free list causes H5FD_alloc() usage to go from >10
seconds to <0.4 second for one example (converting a 30MB equation of
state file from PDB to HDF5 format). The optimization is to simply
keep track of the largest item in the free list and not search the
free list when the largest item is not big enough to satisfy the
request.
./src/H5FDcore.c
./src/H5FDcore.h
./test/h5test.c
If the `backing_store' property is true then a flush causes the entire
contents of memory to be written to the specified file. This is in
preparation for the ASCI/red optimizations and is currently tested by
the pdb2hdf `--cached' switch.
./src/H5Odtypes.c
Wrapped three long lines.
./tools/Makefile.in
./tools/pdb2hdf.c [NEW]
A PDB-to-HDF5 translator. It only translates meta data -- the
resulting HDF5 points into the PDB file for the raw data.
