Commit Graph

502 Commits

Author SHA1 Message Date
Allen Byrne
b2d661b508 Clang-format of source files 2020-09-30 09:27:10 -05:00
Allen Byrne
3f15fb3522 Fix jni with %Lg instead of %Lf
Fix warnings due to improper formed define tag in h5diff
2020-09-29 11:42:17 -05:00
Allen Byrne
274cd0ba1d Pre-format fixes for warnings as errors 2020-09-29 10:24:49 -05:00
David Young
14851e3b82 Merge pull request #2650 in HDFFV/hdf5 from ~DYOUNG/werror:rebased-fprintf-experiment to develop
* commit 'c0fbc5c086566d5d3c1d1ef26baa81a53d59fc08': (24 commits)
  Use the right format string, "%zu", for size_t.
  Repair more format strings.
  Fix a bunch of format string errors reported by Larry.
  Fix some HDfprintf compilation errors: use the right format strings ("zu", PRIuHSIZE), avoid casting some printf arguments, pass the right number of arguments.
  Test the format string "ll" before "l", "L", and "q", like the ./configure script does.  This ought to fix the compilation failure in test/dt_arith.c that Allen told me about:
  Cast a non-void pointer to void pointer for "%p".
  Use PRIu32 and "zu" formats.  Delete some casts from `size_t`.
  I'm taking a guess that this code intended to point the 2-digit wide hexadecimal octet values, not 2 character-wide pointers to the bytes.  The %02p format, which is a GNU-ism, disagreed with GCC 8.3.0 and the option flags we use.
  %08p is not portable, it's a GNU-ism.  Use %8p, instead.  Squashes a GCC error.
  Add format string macros PRI[doxX]HID for hid_t and use PRIdHID.
  Use HDva_copy() and introduce a bunch of compatbility format-string constants for uppercase hexadecimal strings, `PRIX...`.  Should fix the VS2010 errors that Allen mentioned:
  Always #define HDfprintf as fprintf in this header.  I believe this will fix the Windows build error that Allen reported.
  Provide an HDvasprintf implementation only if it isn't #defined.  This should fix the mingw compilation issue that Allen reported.
  Fix va_list usage in the vasprintf(3) implementation.
  Promote format-string warnings to errors.
  Use the portable `-eq` operator instead of the bash-ism `==`. Fixes the tests on NetBSD, where /bin/sh != bash.
  Restore a literal percent sign ("%%") that I accidentally deleted.
  Fix code that made GCC complain about a NULL or `unsigned char *` arguments for "%s".
  Take pains to provide UINT64_MAX in all conditions.
  Correct a couple of format strings.
  ...
2020-09-28 14:42:18 -05:00
David Young
08034972bc Merge remote-tracking branch 'hdffv/develop' into rebased-fprintf-experiment 2020-09-27 15:03:44 -05:00
David Young
d20e1274a7 Repair more format strings. 2020-09-25 20:03:20 -05:00
Allen Byrne
ff0881f35b OESS-98 merge with clang-format changes 2020-09-25 16:43:57 -05:00
Allen Byrne
571a5e9250 Add h5ls test plugin format target 2020-09-25 14:16:56 -05:00
Allen Byrne
d8d17d2328 File changes to affect formatting 2020-09-04 16:51:30 -05:00
Allen Byrne
30c7264c2c CMake and script changes for clang-format 2020-09-04 16:36:52 -05:00
David Young
d85cd245d2 Merge remote-tracking branch 'hdffv/develop' into rebased-fprintf-experiment 2020-09-03 16:13:47 -05:00
Dana Robinson
3d7a0dc6d5 Merge branch 'develop' into develop_minor 2020-08-27 10:36:03 -07:00
Allen Byrne
3f65adefd9 The version string has a second use for packaging 2020-08-26 09:03:43 -05:00
Allen Byrne
336b300242 Add back function for VERIFY_EXTERNAL_CONSOLIDATION 2020-08-25 11:19:12 -05:00
Dana Robinson
b2d917437d Minor refactoring based on 1.10 normalization work 2020-08-17 09:12:59 -07:00
Allen Byrne
57c4aeb0cc TRILABS-277 Use JIRA number as #ifdef 2020-08-15 17:25:22 -05:00
Allen Byrne
7603d2c8be HDFFV-9984 fix test logic 2020-08-14 16:39:40 -05:00
Allen Byrne
b196ddb4a8 HDFFV-9984 - correct name of ref files 2020-08-14 15:21:56 -05:00
Allen Byrne
a21ae8e56b HDFFV-9984 add missing ref file 2020-08-14 13:45:57 -05:00
Allen Byrne
646872cb8e HDFFV-9984 - add missing ref files 2020-08-14 13:45:31 -05:00
Allen Byrne
500d87fd1f HDFFV-9984 Add options to merge/prune external links during repack 2020-08-14 12:16:58 -05:00
Dana Robinson
5ce2a17804 Removes staff email addresses from the repository
Removes redundant C library headers from hl library
2020-08-06 17:58:07 -07:00
Dana Robinson
be02566f49 Fixes indenting in tools test scripts 2020-08-04 09:14:36 -07:00
Allen Byrne
fc57490e02 Mingw copy disabled 2020-07-31 07:50:11 -05:00
David Young
0bb87534a6 Merge remote-tracking branch 'hdffv/develop' into rebased-fprintf-experiment 2020-07-30 18:15:09 -05:00
Allen Byrne
6a1cf090c6 Correct reference file 2020-07-29 12:56:03 -05:00
Allen Byrne
1f7fa50137 Correct h5diff filenames 2020-07-29 08:24:30 -05:00
Allen Byrne
5857bb8170 Only one line needed to compare 2020-07-27 16:15:50 -05:00
Allen Byrne
799f2891c2 Revert err file 2020-07-27 15:47:10 -05:00
Allen Byrne
e0b86594c2 revert error-stack enable 2020-07-20 16:46:49 -05:00
Allen Byrne
a2f2887675 add test file ext 2020-07-17 13:22:26 -05:00
Allen Byrne
e5145030a4 Correct file name in test 2020-07-16 08:31:48 -05:00
Allen Byrne
bac0fc6309 Tools refactor
Move error_stack setup to tools library
Add structure for h5dump properties
Eliminate duplicated h5diff functions
Use properties structure in place of argument lists.
2020-07-15 11:20:16 -05:00
David Young
a8dc4bd93f Always #define HDfprintf as fprintf in this header. I believe this will fix
the Windows build error that Allen reported.
2020-07-07 10:49:55 -05:00
David Young
f68226ed89 Use the portable -eq operator instead of the bash-ism ==. Fixes the
tests on NetBSD, where /bin/sh != bash.
2020-07-07 10:49:55 -05:00
David Young
307cb5da48 Squash my changes on branch fprintf-experiment into one commit for
reapplication to my new warnings branch, `warnings-again`.  These
changes are included:

commit 915551b7bf64e777dd2007386ec77b1d117770da
Merge: 63858c2 a8892bb
Author: David Young <dyoung@hdfgroup.org>
Date:   Mon Nov 25 17:39:49 2019 -0600

    Merge remote-tracking branch 'hdf5/develop' into fprintf-experiment

commit a8892bb42d
Merge: 5c911d8 f907b51
Author: David Young <dyoung@hdfgroup.org>
Date:   Mon Nov 25 17:33:54 2019 -0600

    Merge pull request #2055 in HDFFV/hdf5 from ~DYOUNG/vchoi_fork:add-werror-and-squash-some to develop

    * commit 'f907b511d06612dafc7814a7c30f2f3d2b76d52b':
      Oops, remove more C99 designated initializers for VS 2010 compatibility.

commit 63858c22e168acaec0af8ced6641f26102cc6bb0
Merge: 20ae787 5c911d8
Author: David Young <dyoung@hdfgroup.org>
Date:   Mon Nov 25 17:04:42 2019 -0600

    Merge remote-tracking branch 'hdf5/develop' into fprintf-experiment

commit 5c911d8baf
Merge: b8a5671 62208b0
Author: David Young <dyoung@hdfgroup.org>
Date:   Mon Nov 25 16:58:27 2019 -0600

    Merge pull request #2030 in HDFFV/hdf5 from ~DYOUNG/vchoi_fork:add-werror-and-squash-some to develop

    * commit '62208b056a09c01855fbac7f75146be58ad6bfe5': (44 commits)
      Add an #include to get a function declaration.
      Don't use C99 designated initializers, they're not compatible with Visual Studio 2010.
      Quiet some more maybe-uninitialized warnings---each is a false positive, *sigh*.  This is more code that may not compile with VS2010, *sigh sigh*.
      Always warn on maybe-uninitialized.  -Wincompatible-pointer-types was not available until GCC 5, so enable it only if that's the GCC version we're using.
      Only promote maybe-uninitialized warnings to errors on GCC 8.  Even on GCC 8, there may be false positives at low optimization levels?  I need to check.
      Only use -Werror=cast-function-type with GCC 8 and later.
      Put all of the -W options back into the order I found them in so that it's easier to compare old and new config/gnu-flags.
      Add new source files to CMakeLists.txt.
      Mention the -Werror= flags in libhdf5.settings.in.
      free -> HDfree
      Promote decleration-after-statement warnings to errors.
      Quiet decleration-after-statement warnings.
      Move a statement under some declarations since some vintages of Visual Studio don't like declarations after statements.
      Document H5D__chunk_mem_xfree_wrapper().
      Undo accidental test deletion.
      Oops, delete a debug printf that snuck in here.
      Undo my changes to the HD macros, hadn't really intended those to be on this branch....
      Make errors of some more warnings.  Move disabled warnings to DEVELOPER_WARNING_CFLAGS.  Put just one warning option on a line, and sort some of the options.
      Cast to the parameter type, H5VL_token_t *, instead of to unsigned char *.
      Change hdset_reg_ref_t and H5R_ref_t from arrays of unsigned char to structs containing those arrays.  Encapsulating the arrays in this way makes it easier to write and think about pointers to these types, casts to/from these types, etc.
      ...

commit 20ae7877e33931b95e8c3502b027d6c3fe94a11f
Merge: 46f8c61 edd5297
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 15:34:09 2019 -0600

    Merge remote-tracking branch 'origin/add-werror-and-squash-some' into fprintf-experiment

commit 46f8c613d5117a8be5bc8385a072daa0b4262f06
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 15:29:00 2019 -0600

    GCC really wants us to use `ll` to format `long long`, so try to make that work
    before any other format modifier.  Seems like we're not compiling the autoconf
    test program with -Werror=format ?  Probably should.

commit eee35b8ef3759c391327cd48a9b3c56b6f8abc99
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 15:28:05 2019 -0600

    It's hard to know just how wide an HDoff_t will be, and I don't think POSIX or
    C standards provide a PRI macro for it, so cast to intmax_t and format using
    PRIdMAX.

commit 86eab12df7a89b546a38e99f8178dd2adbcb3433
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 15:26:25 2019 -0600

    URemove some casts.se the right format string for the argument.  Here and there
    stop casting a printf argument.

commit f722f7cbecbaa99449941484b014426f62f1bed5
Merge: 58e3743 6d5ec83
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 14:44:16 2019 -0600

    Merge branch 'add-werror-and-squash-some' into fprintf-experiment

commit 58e3743b7faa9836606ee91798fe80dfc0040da7
Author: David Young <dyoung@hdfgroup.org>
Date:   Wed Nov 20 21:07:21 2019 -0600

    Remove custom HDfprintf implementation, using the standard library's,
    instead.  Take a swipe at repairing fprintf format strings, mainly
    replacing "%Hu" with "%" PRIuHSIZE, "%a" with "%" PRIuHADDR, "%Zu" with
    "%zu".

    Here and there remove an awkward cast of a printf argument to `long
    long` and use PRI[doux]8, PRI[doux]32, or PRI[doux]64, instead.

    Change occurrences of "%t" to "%s" and perform a suitable change of
    argument, `cond` -> `cond ? "TRUE" : "FALSE"`.

    Some occurrences of %Hu, %a, and %t remain, they just weren't flagged by
    the compiler because of #ifdef'age.

commit d4366909293fa970c23512ac80e5d865d76cddbf
Author: David Young <dyoung@hdfgroup.org>
Date:   Wed Nov 20 20:54:32 2019 -0600

    Promote format-string warnigns to errors.
2020-07-07 10:49:55 -05:00
Quincey Koziol
13c9b3768e Address CMake and deprecated API build failures from monotonic timer patch. 2020-07-03 11:28:12 -05:00
Quincey Koziol
71b601d0d3 Clean up warnings 2020-06-27 20:02:51 -05:00
Quincey Koziol
7bdab523b3 Refactor code to remove remaining checks for H5_HAVE_GETTIMEOFDAY scattered around in various places. Also clean up iopipe.c. 2020-06-27 09:47:55 -05:00
vchoi
01b632c69c Fix for HDFFV-10961:
Couple changes to the tests' usage output files for h5clear.
2020-06-11 14:12:38 -05:00
Dana Robinson
ad8f72ca29 Removed HDgets macros since gets was deprecated in C99 and removed
in C11 (gets() is not used in our repo).
2020-05-10 03:33:54 -07:00
Dana Robinson
dc3b8372c7 Protected H5Oset_comment() in h5dump test generator.
(Assumes environment variable overrides default VOL connector)
2020-04-28 04:21:47 -07:00
Dana Robinson
bf5e832acc Fixed pio_perf const pointers. 2020-04-27 09:58:11 -07:00
Dana Robinson
c03ee563f4 Further updates to the tools warnings fixes from code review. 2020-04-27 08:50:27 -07:00
Dana Robinson
a8676d74d9 Fixes for warnings in the tools code. 2020-04-25 16:49:04 -07:00
Dana Robinson
1db039d1be Merge pull request #2532 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop
* commit '785bd0975ba13c3033820d0fc809da963fcd54ca':
  Fixed h5diff command-line parameters to use 1 and 2 instead of src and dst.
  Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp.
2020-04-22 19:07:48 -05:00
Dana Robinson
785bd0975b Fixed h5diff command-line parameters to use 1 and 2 instead of src
and dst.
2020-04-22 16:49:52 -07:00
Dana Robinson
8cd9d8349e Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp. 2020-04-21 11:36:10 -07:00
Quincey Koziol
9e5dbf6906 Trim trailing whitespace 2020-04-20 18:12:00 -05:00
Dana Robinson
28d2596f65 Changed identifiers and command-line options from "id" to "value" in tools
code to be in agreement with H5VL API terminology.
2020-04-14 04:31:01 -07:00