Code cleanup
Description:
Trim trailing whitespace, which is making 'diff'ing the two branches
difficult.
Solution:
Ran this script in each directory:
foreach f (*.[ch] *.cpp)
sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f
end
Platforms tested:
FreeBSD 4.11 (sleipnir)
Too minor to require h5committest
bug fix
Description:
when diffing a string type string , a cycle is made using the hdf5 get_size function, which returns
the type size
some strings might have a NULL terminator character before the type size position
this was noticed on a HDF-EOS file on the HDFEOSVersion attribute which was defined as a type with a 32 size,
but contained a string with 12 characters, making h5diff to compare the extra garbage characters
Solution:
detect the NULL terminator character and end the diff at that position
Platforms tested:
linux
Misc. update:
bug fix
Description:
when 2 objects were not comparable, the final print information for the non verbose mode printed "0 differences found"
Solution:
replaced instead with a Summary message that says
"Some objects were not comparable"
Platforms tested:
linux
solaris
Misc. update:
New feature.
Description:
Added new tool ph5diff. (Code done by Leon Arber.)
Code is changed but test is not working yet. For now,
it skipped all tests.
Platforms tested:
Tested in heping, serial and parallel modes.
Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-)
Description:
Generally speaking, this is the "signed->unsigned" change to selections.
However, in the process of merging code back, things got stickier and stickier
until I ended up doing a big "sync the two branches up" operation. So... I
brought back all the "infrastructure" fixes from the development branch to the
release branch (which I think were actually making some improvement in
performance) as well as fixed several bugs which had been fixed in one branch,
but not the other.
I've also tagged the repository before making this checkin with the label
"before_signed_unsigned_changes".
Platforms tested:
FreeBSD 4.10 (sleipnir) w/parallel & fphdf5
FreeBSD 4.10 (sleipnir) w/threadsafe
FreeBSD 4.10 (sleipnir) w/backward compatibility
Solaris 2.7 (arabica) w/"purify options"
Solaris 2.8 (sol) w/FORTRAN & C++
AIX 5.x (copper) w/parallel & FORTRAN
IRIX64 6.5 (modi4) w/FORTRAN
Linux 2.4 (heping) w/FORTRAN & C++
Misc. update:
enhanced performance for h5diff
Description:
the comparison cycle for the 2 buffers read from file was using a compare function
where the type must be checked for each datum (e.g due to recursive calls in compound types)
for atomic types this checking can be avoided
Solution:
introduced cycles for each one of the atomic integer and float class types
Platforms tested:
linux
aix
solaris
Misc. update:
Refactor code
Description:
Refactor common code for determining the native type for using in the
tools into separate routine.
Also, reduce diffs between the two branches and bring back some fixes from
the development branch to the release branch.
Platforms tested:
FreeBSD 4.10 (sleipnir)
too minor to require h5committest
bug fixes
Description:
the return error code for a function was not initialized.
in HP-UX it happened that this variable was initialized to -1
causing the function to return with an error condtion
solution : initialized the variable to 0
the name of the dataset was printed after the differences in verbose mode
and report when differences were found
solution : check first if differences were found and then
print the name of dataset and differences
in verbose mode always print the name first
Solution:
Platforms tested:
linux
aix
solaris
Misc. update:
h5diff and h5repack changes
Description:
h5diff
introduced the following four modes of output:
Normal mode: print the number of differences found and where they occured
Report mode: print the above plus the differences
Verbose mode: print the above plus a list of objects and warnings
Quiet mode: do not print output (h5diff always returns an exit code of 1 when differences are found)
h5repack
added an extra parameter for SZIP filter (coding method)
the new syntax is
-f SZIP=<pixels per block,coding>
(pixels per block is a even number in 2-32 and coding method is 'EC' or 'NN')
Example of use:
./h5repack -i file1 -o file2 -f SZIP=8,NN -v
updated usage messages, test scripts and files accordingly
Solution:
Platforms tested:
linux
AIX
solaris
Misc. update:
Code cleanup
Description:
Clean up lots of warnings based on those reported from the SGI compilers
as well as gcc.
Platforms tested:
SGI O3900, IRIX64 6.5 (Cheryl's SGI machine)
FreeBSD 4.9 (sleipnir) w/ & w/o parallel
h5committest
added h5repack and h5diff support for copying and differences of references to dataset regions
modified the behaviour in the diff of attributes, when a difference in name is detected
in the attribute cycle (number of attributes of object), instead of exiting the
cycle, rather continue
Description:
Solution:
Platforms tested:
linux
solaris
AIX
Misc. update:
h5diff new features
Description:
added comparison for attributes
adeded comparison for all dataset datatypes
added tests for the new features
changed the output format
Solution:
Platforms tested:
linux
solaris 5.7
IRIX 6.5 (64)
Misc. update:
h5diff new features
Description:
added the diff for variable lenght, opaque, enum, and bitfield datasets
Solution:
Platforms tested:
linux
solaris 2.7
IRIX
Misc. update:
h5diff new features
bug fix
Description:
implemented the diff for STRING and ARRAY types
fixed a bug. when the datasets are empty, do not try to compare them .
the check empty is made with H5Dgetstorage_size
Solution:
Platforms tested:
linux
solaris 5.7
IRIX
Misc. update:
h5diff new features
Description:
implemented diff for compound types. so far it only compares the integer and float classes
of these compound types. this is done with a new recursive function
that compares datum by datum
Platforms tested:
linux
solaris 2.7
IRIX
Misc. update:
h5repack new features
Description:
added a copy routine for all types
added a copy routine for attributes
commnented some debug messages in h5trav
added the verbose option to some h5diff messages
Platforms tested:
linux
solaris 2.5
IRIX
Misc. update:
