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303 Commits

Author SHA1 Message Date
Allen Byrne
93744615f9 Fix list var 2018-02-27 14:04:34 -06:00
Allen Byrne
b36bad53d9 Inc CMake min, Add new tests, rework test CMake files 2018-02-27 12:57:07 -06:00
Allen Byrne
bb27f1441f HDFFV-10412 merge from develop 2018-02-22 11:36:41 -06:00
Allen Byrne
76a0003f96 HDFFV-10412 update test ref files 2018-02-22 10:18:17 -06:00
Binh-Minh Ribler
39e3da7563 Improving tests 
Description:
    - Added test for version bounds with nested datatypes
    - Added script for additional version bound test in h5repack
    - Cleaned up tests for consistency
    - Removed extra included header files
Platforms tested:
    Linux/64 (jelly)
    Linux/64 (moohan)
    Darwin (osx1010test)
 2018-02-17 16:18:37 -06:00
Allen Byrne
fc875eb5b7 HDFFV-10384 and includes cleanup merged from devlop 2018-02-16 09:25:51 -06:00
Allen Byrne
205d33f332 Cleanup overuse of include files 2018-02-14 10:08:09 -06:00
Vailin Choi
66ea3b8fb9 Merge pull request #876 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:bugfix/version_bounds to develop 
* commit 'b4294d8d3e5937527e9814f23d04df412ebbe770':
  Added comment for clarification about latest as 1.10. Platforms tested:     Linux/64 (jelly)     Linux/32 (jam)
  Fixed typos Platforms tested:     Linux/32 (jam)
  Additional tests Description:     - Revised and add more variety to version bound tests per review     - Revised gen_bounds.c per review Platforms tested:     Linux/64 (jelly)     Linux/32 (jam)     Darwin (osx1010test)
  Added gen_bounds
  Cleaned up per comments in PR# 876
  Modifications made based on comments from pull request.
  Added gen_bounds.c
  Added gen_bounds.c
  Fix bounds check for the generation of cache image.
  Modify usage description for -j and -k options so that it is more informative.
  Modify h5repack usage so that it is more descriptive.
  Changes made based on code reviews.
  Further improvement
  Fixed comment.
  Adding data file generator Description:     Added gen_bounds.c to generate the following files:     - bounds_earliest_latest.h5     - bounds_earliest_v18.h5     - bounds_latest_latest.h5     - bounds_v18_latest.h5     - bounds_v18_v18.h5     for testing the version bounds fix in 1.8 and 1.6.
  Initial checkin for library version bounds Code changes to provide versioning support when adding to the enumerated defines for H5F_libver_t.
 2018-02-13 19:15:40 -06:00
Vailin Choi
2fbdfcc457 Modifications made based on comments from pull request. 2018-02-06 21:42:02 -06:00
Allen Byrne
20ee50c5b9 HDFFV-10345 splelling and whitespace corrections 2018-02-05 12:48:01 -06:00
Allen Byrne
f325002db9 HDFFV-10345 spelling errors 2018-02-05 12:38:20 -06:00
Allen Byrne
16e649fa0d HDFFV-10398 merge from develop improve CMake code 2018-01-30 16:30:17 -06:00
Allen Byrne
2f18da435e HDFFV-10398 use the simpler add_subdirectory signature 2018-01-30 12:21:01 -06:00
Vailin Choi
be77e59353 Merge branch 'develop' into bugfix/version_bounds 
Keep the branch up-to-date.
 2018-01-23 16:00:31 -06:00
Allen Byrne
233afe3b6f HDFFV-10385,10392,10393 merge from develop 2018-01-22 11:22:27 -06:00
Vailin Choi
f122d6f27f Modify usage description for -j and -k options so that it is more informative. 2018-01-18 14:26:13 -06:00
Allen Byrne
6ca95c512a HDFFV-10385 rework java names 2018-01-17 10:27:00 -06:00
Vailin Choi
d202b3cfa1 Modify h5repack usage so that it is more descriptive. 2018-01-16 17:35:29 -06:00
Vailin Choi
120d02657b Merge branch develop into bugfix/version_bounds 2018-01-12 17:51:42 -06:00
Allen Byrne
2fa4b8bc67 HDFFV-9724 merge vds duplicate code 2018-01-11 09:11:45 -06:00
Allen Byrne
bdde53eb3e HDFFV-8745 remove obsolete files 2018-01-10 11:49:09 -06:00
Allen Byrne
88574bf856 Merge pull request #852 in HDFFV/hdf5 from ~BYRN/hdf5_adb:bugfix/HDFFV-10361-hdffv-9724-fix-has-duplicated to develop 
* commit '9c2a9cec1f708039dbc625bcc6827ab64282e065':
  HDFFV-10361 Correct signatures
  HDFFV-10361 Update release note for vds prefix
  HDDFV-10361 combine duplicated prefix utility functions
 2018-01-10 09:40:38 -06:00
Allen Byrne
3ca7b82e5a HDFFV-8745 remove obolete files 2018-01-10 08:51:13 -06:00
Allen Byrne
f548e878b0 HDFFV-8745 merge from develop 2018-01-09 09:20:25 -06:00
Allen Byrne
4c004acf1d Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '92324bacae5ac697dbdf8e6cf8b3d709f189849a':
  Snapshot version 1.11 release 2
 2018-01-08 16:01:40 -06:00
Allen Byrne
2a1a2c5993 HDDFV-10361 combine duplicated prefix utility functions 2018-01-05 11:45:44 -06:00
Allen Byrne
a30a41bc32 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '994611a2d4320358dc5a1c0c721633670ad4833c':
  Snapshot version 1.11 release 1
 2018-01-05 10:49:03 -06:00
M. Scot Breitenfeld
c971c366a9 reverted changes from sync 2018-01-05 10:17:34 -06:00
hdftest
bee148a995 Snapshot version 1.11 release 2 2018-01-05 10:09:10 -06:00
hdftest
d01ad2a94a Snapshot version 1.11 release 1 2018-01-05 08:50:10 -06:00
Allen Byrne
7d13e53294 HDFFV-9745 Create test and files to verify fixes 2018-01-04 10:09:03 -06:00
Allen Byrne
0ec1e5eeee HDFFV-8745 remove files from test scripts 2018-01-02 15:08:43 -06:00
Allen Byrne
ccf044135c HDFFV-8745 remove obsolete files 2018-01-02 14:43:28 -06:00
Allen Byrne
5f4676f3c8 HDFFV-8745 - fix implementation of 8625 2018-01-02 14:39:45 -06:00
Allen Byrne
17b8f0bb93 Fix valgrind issues 2018-01-02 09:39:09 -06:00
Allen Byrne
9a477bef3a HDFFV-9724 add valgrind ENV 2017-12-29 13:13:30 -06:00
Allen Byrne
bd34c9e455 HDFFV-9724 Corrected files and verified tests 2017-12-28 16:49:50 -06:00
lrknox
86d8a4c267 Revert "Merge pull request #826 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop" 
This reverts commit b1223dd653, reversing
changes made to b25f123f5f.
 2017-12-22 12:28:24 -06:00
Allen Byrne
65e09afd6c Add prefix dir to the clear command 2017-12-13 15:17:02 -06:00
Allen Byrne
ba714e6820 HDFFV-9724 Add H5LS prefix test with ${ORIGIN} 2017-12-13 15:08:04 -06:00
Allen Byrne
4da73f893a Add h5dump VDS prefix tests 2017-12-13 14:29:22 -06:00
Vailin Choi
14ced87d62 Merge branch 'develop' into bugfix/version_bounds 
Merge from develop to keeep the branch up-to-date.
 2017-11-27 14:20:36 -06:00
Vailin Choi
96784c9873 (1) Merge branch 'develop' into bugfix/version_bounds 
(2) Add two new options to h5repack for low and high bounds as in H5Pset_libver_bounds.
(3) Modify message pre_copy callbacks so that H5Ocopy can handle version bounds check.
(4) Add version bounds check for cache image feature.
 2017-11-25 02:22:24 -06:00
Dana Robinson
3b17287368 Brings H5Z and H5PL packages in sync with VOL integration branch. 2017-11-17 15:21:49 -08:00
Dana Robinson
3a5e158191 Fixed the problems with LDFLAGS and AM_LDFLAGS in filter plugins. 2017-11-12 21:14:01 -08:00
Dana Robinson
00ade113c5 Plugin test rework 
Cleanup of plugin test code. Renames many files. Prep for VOL branch merge.
 2017-11-08 17:52:44 -08:00
Allen Byrne
f8fd6d0b41 Correct usage of MPI vars 2017-11-01 13:41:44 -05:00
Allen Byrne
2e2854cbb1 Correct test DEPENDS 2017-10-25 09:05:02 -05:00
Allen Byrne
c2be993f32 HDFFV-10297 Windows issues fixed 2017-10-20 09:37:18 -05:00
Allen Byrne
18ba8cb7d2 Windows cannot share files easily 2017-10-20 08:29:31 -05:00
Allen Byrne
d9e7aad64b Remove extra command line 2017-10-18 16:33:00 -05:00
Allen Byrne
4ab2d9f010 Correct name of file 2017-10-18 16:19:32 -05:00
Allen Byrne
f071b2ff97 Add Mask test to script 2017-10-18 16:07:42 -05:00
Allen Byrne
cfad6bf6f8 Add new output files to clear test 2017-10-18 15:51:56 -05:00
Allen Byrne
c475dd05a6 Correct name of err file 2017-10-18 15:45:07 -05:00
Allen Byrne
49c21ebcf2 Fix name of output files 2017-10-18 15:14:46 -05:00
Allen Byrne
d68de1621c Fix format convert error mask test 2017-10-18 15:06:14 -05:00
Allen Byrne
cf3342f8fc Fix tools error handling and valgrind issues 2017-10-18 14:03:27 -05:00
Allen Byrne
78a5870680 Fix error handling issues 2017-10-17 16:13:12 -05:00
Allen Byrne
d9bfebc1db Correct test results 2017-10-17 12:23:05 -05:00
Allen Byrne
e071e746f8 HDFFV-1097 Changed file columns 2017-10-16 17:39:56 -05:00
Allen Byrne
2cbdf46cb9 HDFFV-10297 add h5copy test and fix h5diff errors 2017-10-16 17:26:23 -05:00
Allen Byrne
087e0d6efa Merge pull request #705 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '11df540c92ac284a664be912b0cb045e8d92e7d3':
  Added older change that was added to last change
  HDFFV-10297 add release note - fix test step
  HDFFV-10297 Fix resource errors and cleanup whitespace
  HDFFV-10297 fix vl buffer error
  HDFFV-10297 update calls to H5Zfilter_avail
  HDFFV-10297 - code changes nullify error
  HDFFV-10297 - Fix test errors - five remaining
  HDFFV-10297 - fix repack individual objects includes H5Zfilter_avail() fix
 2017-10-11 15:42:34 -05:00
Allen Byrne
0c07376431 HDFFV-10297 Fix resource errors and cleanup whitespace 2017-10-10 13:06:12 -05:00
Allen Byrne
c577a5e995 HDFFV-10297 update calls to H5Zfilter_avail 2017-10-09 17:00:15 -05:00
lrknox
4a3998ac30 Correct indentation in h5diff/Makefile.am. 2017-10-09 15:45:33 -05:00
lrknox
726d7d3af5 Add "-rpath /nowhere" to *_la_LDFLAGS for plugin test libraries. This 
allows them to be successfully linked but not installed.  The change was
added for the HDF5 1.8.20 release, but is also needed for all other HDF5
branches.
 2017-10-09 15:33:09 -05:00
Allen Byrne
66990bc90f HDFFV-10297 - code changes nullify error 2017-10-09 13:23:02 -05:00
Allen Byrne
daddf169b0 HDFFV-10297 - Fix test errors - five remaining 2017-10-09 12:59:28 -05:00
Allen Byrne
a07d6b52fb HDFFV-10297 - fix repack individual objects 
includes H5Zfilter_avail() fix
 2017-10-06 14:36:07 -05:00
Allen Byrne
a49372724c Fix other test name typos 2017-10-05 08:55:58 -05:00
Allen Byrne
82986dba72 Fix typo in valgrind test name 2017-10-05 08:51:32 -05:00
Allen Byrne
467f30c410 Cleanup cmake clean macros 2017-10-03 14:14:53 -05:00
Allen Byrne
32a1b98a6c Correct depends name 2017-10-03 12:26:40 -05:00
Allen Byrne
4c0784696b Fix list of names 2017-10-03 11:26:18 -05:00
Allen Byrne
35861e3d6f new reference file 2017-10-03 11:15:55 -05:00
Allen Byrne
a8f03185ad Fix repack plugin test - reorganize test macros 2017-10-03 11:14:35 -05:00
Allen Byrne
5cd93e70c0 Adjust filter available variables 2017-10-02 16:41:13 -05:00
Allen Byrne
4f9e47650a Fix STREQUAL if commands. 2017-10-02 12:39:15 -05:00
Allen Byrne
db157e317e Use define name instead. 2017-09-20 11:51:21 -05:00
Allen Byrne
9e9d2ccd40 Fix VS2013 compile error 2017-09-20 09:52:44 -05:00
Allen Byrne
1c7c5a604b HDFFV-10276 Add UD flag option to h5repack 2017-09-07 13:29:31 -05:00
Allen Byrne
d3e98edab0 HDFFV-9774 Apply standard mask to .err files 2017-09-06 10:47:18 -05:00
Allen Byrne
e271abfb36 HDFFV-10276 Add filter mask for standard err 2017-09-06 10:18:18 -05:00
Allen Byrne
89f65fc97e HDFFV-9774 Add enable-error-stack argument to h5diff 2017-08-31 15:58:37 -05:00
Allen Byrne
678c3ae153 HDFFV-10188 force non-native type description 2017-08-23 10:18:08 -05:00
Allen Byrne
d200cd31a7 HDFFV-10188 emu insists on printing non-native description 2017-08-23 10:16:49 -05:00
Allen Byrne
3dcb188708 HDFFV-10188 fix typo 2017-08-21 13:06:57 -05:00
Allen Byrne
7acbb154d1 HDFFV-10188 add missing copy commands 2017-08-21 12:26:48 -05:00
Allen Byrne
138c3ee366 HDFFV-10188 Add tests and files 2017-08-21 11:56:31 -05:00
Allen Byrne
f695491f05 HDFFV-10188 enable null space test 2017-08-21 10:35:49 -05:00
Allen Byrne
5615cc2a69 Fix misnamed file in test script 2017-08-02 12:42:40 -05:00
Allen Byrne
02a56054b0 Add h5repack tests for paged aggregation 2017-08-02 10:53:17 -05:00
Vailin Choi
8b8e7ae232 Merge pull request #620 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop 
* commit '59e94f5009a1f738d9924be942448f8cf6355b00':
  Add h5repack tests for paged aggregation Add tests to h5repack.sh.in to verify options added for paged aggregation work as expected.
 2017-08-02 01:49:42 -05:00
Allen Byrne
e1a81b17e0 HDFFV-10256 Add test 2017-08-01 13:52:10 -05:00
Vailin Choi
59e94f5009 Add h5repack tests for paged aggregation 
Add tests to h5repack.sh.in to verify options added for paged aggregation work as expected.
 2017-07-29 01:10:25 -05:00
Allen Byrne
04d6a3ec3c if PARALLEL copy seconf file to PAR folder 2017-07-27 11:18:52 -05:00
Allen Byrne
373a37da01 Make sure zip_perf program does not run concurrently 2017-07-26 09:30:41 -05:00
Allen Byrne
1018256d55 Correct copy to file name 2017-07-25 15:44:25 -05:00
Allen Byrne
e790a0b42d HDFFV-10246 Add check for string not null before use 2017-07-25 15:15:20 -05:00
Dana Robinson
ec7450c4b4 Closed a wayward fapl ID in tools/test/misc/repart_test.c 
and tidied.
 2017-07-19 15:26:34 -05:00
Dana Robinson
ffc9b1d917 Stripped C standard library headers from tools test code. 2017-07-19 10:46:27 -05:00
Allen Byrne
c325dd2a65 HDFFV-10219 another mode change 2017-06-26 09:38:30 -05:00
Allen Byrne
e526ff9dc6 HDFFV-10219 change subset to use BINARY mode for h5dump 2017-06-26 09:36:28 -05:00
Allen Byrne
6b2f384a3c HDFFV-10219 default input binary to NATIVE 2017-06-20 16:40:49 -05:00
Allen Byrne
00f4456e70 HDFFV-10219 - disable h5dump tests until h5import NATIVE is fixed 2017-06-19 16:43:44 -05:00
Allen Byrne
3a637e227c HDFFFV-10219 fix file creation contention on windows 2017-06-16 12:04:22 -05:00
Allen Byrne
6832143610 HDFFV-10219 - fix name templates 2017-06-15 16:20:55 -05:00
Allen Byrne
6b28addeca HDFFV-10219 add test headers 2017-06-15 14:48:47 -05:00
Allen Byrne
be172e8018 HDFFV-10219 - Fix subset test 2017-06-15 14:11:50 -05:00
Allen Byrne
1797bb7f5f HDFFV-10219Fix binary test to use gen files 2017-06-15 14:09:32 -05:00
Allen Byrne
22fa1e8009 Add subset tests to script 2017-06-15 13:16:40 -05:00
Allen Byrne
1210d58b87 Fix changes to reference files. Still need to add subset test. 2017-06-15 12:51:56 -05:00
Allen Byrne
7424ea56d7 HDFFV-10219 Add new reference file file for new test 2017-06-15 12:27:03 -05:00
Allen Byrne
c288898630 HDFFV-10219 - fix for native in bin file and possible non-native in h5 2017-06-15 12:19:46 -05:00
Allen Byrne
61517c796f HDFFV-10219: add generated files to memcheck clear command 2017-06-12 12:53:51 -05:00
Allen Byrne
b829420a0d HDFFV-10219: Added keyword SUBSET to h5import list. 2017-06-12 12:22:52 -05:00
Dana Robinson
1e9354bcf5 Merge branch 'develop' into windows_open 2017-05-31 15:07:49 -07:00
Dana Robinson
57f0a296c0 Minor warning fix. 2017-05-25 10:25:30 -04:00
Dana Robinson
18ae45027c Fixed additional minor warnings. 2017-05-25 08:42:18 -04:00
Allen Byrne
0f81f23d69 HDFFV-8611 add autotools test 2017-05-22 13:55:15 -05:00
Allen Byrne
cdcef539a3 HDFFV-8611 change h5repack to save the root group creation order 
Added test and new arguments to control the the input file parsing.
 2017-05-22 13:10:40 -05:00
Allen Byrne
e60bf13c76 HDFFV-9055 Correct file generator 2017-05-18 16:29:52 -05:00
Allen Byrne
fcc56184f1 Whitespace 2017-05-17 15:09:13 -05:00
Allen Byrne
23d9fe2649 HDFFV-9055 add test files 2017-05-17 10:06:17 -05:00
Allen Byrne
71637634ac HDFFV-9995 Clarify help text 2017-05-16 10:16:44 -05:00
Allen Byrne
4f0b92bdd5 HDFFV-10128 Fixed string length with no null fixed 2017-05-16 09:28:49 -05:00
Allen Byrne
56c3ec9820 HDFFV-10128 add test to check null term 
Test is another dataset
 2017-05-15 12:33:58 -05:00
Allen Byrne
0cb8152b8e HDFFV-10186 Need to pull the flag into the script 2017-05-11 09:03:21 -05:00
Allen Byrne
ec0935a924 HDFFV-10186 xml test also needs endianess aware files 2017-05-10 12:45:06 -05:00
Allen Byrne
445c805a4c HDFFV-10186 Add endianess to bitfield and fix tests 2017-05-10 10:59:13 -05:00
Allen Byrne
4f36f613a6 HDFFV-10186 Whitespace change 
Mostly tabs to spaces
Remove Modifications comments
 2017-05-09 16:52:05 -05:00
Allen Byrne
6d0d9d46da Fix typo in name of ddl file in command 2017-05-05 16:54:28 -05:00
Allen Byrne
9076e74d38 Fix name to copy 2017-05-05 10:05:59 -05:00
Allen Byrne
c90f72a0d4 Correct name of file to copy 2017-05-04 16:42:32 -05:00
Allen Byrne
412f68103e Use correct var types for data 2017-05-04 13:32:58 -05:00
Allen Byrne
006e568021 Remove duplicate defines 2017-05-04 11:41:47 -05:00
Allen Byrne
bcaf579ac4 Add test file to list and fix test typo 2017-05-02 15:54:40 -05:00
Allen Byrne
7608b264e4 Make test scripts fail if result files are created 2017-05-02 12:36:02 -05:00
Dana Robinson
734aebc395 Rework of the POSIX file open permissions and macros to clean up 
HDopen() calls.

Also fixed a minor const warning in the core VFD.
 2017-04-28 18:13:22 -04:00
lrknox
be49a94226 Comment out install-exec-hooks to remove libdynlib* files. Allen did 
the same for hdf5_1_10 and hdf5_1_10_1 because the hooks don't reliably
work.  In the develop branch they are causing make install failures
because the autotools' install commands sometimes attempt to chmod these
files when they no longer exist.
 2017-04-28 16:37:22 -05:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10 
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
 2017-04-25 16:05:36 -05:00
Larry Knox
3750e8ac7c Merge pull request #449 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit '7bd516f2ead21e8470cc25c0b664ad6b56c723a0':
  Our best effort to build dynamic plugin tests and not install them with "make install".  It seems the install-exec-hook doesn't remove the last to be installed.
  Add targets for plugin test libraries to avoid linking to external libs.
 2017-04-21 15:32:13 -05:00
lrknox
7bd516f2ea Our best effort to build dynamic plugin tests and not install them with 
"make install".  It seems the install-exec-hook doesn't remove the last
to be installed.
 2017-04-21 14:32:45 -05:00
Allen Byrne
abdb412d50 file already in list 2017-04-21 11:04:27 -05:00
Allen Byrne
9a7b106d37 Correct test options to match autotools script 2017-04-20 14:57:36 -05:00
Allen Byrne
7ee229bced Updates to CMake for the changes in the autotools script 2017-04-20 13:45:35 -05:00
Vailin Choi
43e03c548a Modifications based on review comments from pull request. 
Made changes according to review comments and discussion with Allen.
 2017-04-19 22:51:39 -05:00
Vailin Choi
53f1450f9d Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '8f34c3cfd46054f6478b34df6af324c353e44d62':
  Update tool dyn lib
  LDFLAGS module forces .so lib to be built on osx instead of .dylib
  java jni lib also needs to avoid the version-info
  HDFFV-10170 undo patch
  Add plugin options for libs
 2017-04-19 16:06:25 -05:00
Allen Byrne
62770c6432 Update tool dyn lib 2017-04-18 14:23:35 -05:00