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1294 Commits

Author SHA1 Message Date
HDF Tester
5ad9bfb322 [svn-r25395] Snapshot version 1.9 release 187 2014-07-06 07:31:55 -05:00
HDF Tester
8925b39181 [svn-r25378] Snapshot version 1.9 release 186 2014-06-29 05:24:43 -05:00
HDF Tester
fbaf82bc3c [svn-r25339] Snapshot version 1.9 release 185 2014-06-22 05:26:37 -05:00
Allen Byrne
c194e9c9a7 [svn-r25313] Use cmake var to store name of created h5_test_kind_xxxx mod file. 
Tested: local linux
 2014-06-18 09:28:09 -05:00
Scot Breitenfeld
bfb60a0cc1 [svn-r25304] Fixes latest check-in errors for: 
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof

(1) Removed the overloaded h5_sizeof functions for characters and integer arrays since Sun compilers don't allow them to be passed into a function that uses sizeof.

(2) Requested min. precision for reals to avoid duplicate interfaces when the flag -r8 (or equiv.) is set.

tested:
*jam: intel, -i8 -r8 --enable-fortran2003
*jam: pgi, --enable-fortran2003
*emu: sun, --enable-fortran2003
 2014-06-17 13:09:39 -05:00
Scot Breitenfeld
90757478c2 [svn-r25294] added implicit none 2014-06-16 12:06:46 -05:00
Scot Breitenfeld
7d3ff84d59 [svn-r25291] Fix for: 
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof
 2014-06-16 11:56:01 -05:00
Scot Breitenfeld
9cf0844928 [svn-r25290] Fix for: 
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof
 2014-06-16 11:38:07 -05:00
Scot Breitenfeld
744bc7d236 [svn-r25286] Fix for: 
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof 

Tested: jam (gnu, intel) with make and cmake.
 2014-06-16 10:15:25 -05:00
HDF Tester
588a733b18 [svn-r25285] Snapshot version 1.9 release 184 2014-06-15 04:58:19 -05:00
Quincey Koziol
ec408ef083 [svn-r25283] Description: 
Correct error in new hyperslab selection test to use the right # of
dimensions for start/stride/count/block arrays.  Also, switch H5Sselect_select
to H5Smodify_select.

Tested on:
    MacOSX/64 10.9.3 (amazon) w/gcc 4.9.1, OpenMPI, C++, FORTRAN & threadsafe
    (Too minor to require h5committest)
 2014-06-13 22:23:54 -05:00
Quincey Koziol
4ccb865c70 [svn-r25273] Description: 
Bring in Chao/Neil/my changes to optimize hyperslab selection operations
further, along with 3 new public API routines: H5Scombine_hyperslab(),
H5Sselect_select() and H5Scombine_select(), along with many minor cleanups to
the code and fixing a few compiler warnings.

Tested on:
    Mac OSX/64 10.9.3 w/gcc 4.9.x and parallel w/OpenMPI
    (h5commttest forthcoming)
 2014-06-13 01:23:57 -05:00
HDF Tester
99800edafb [svn-r25241] Snapshot version 1.9 release 183 2014-06-08 06:30:43 -05:00
Scot Breitenfeld
cf71b7db57 [svn-r25238] Removed warning about the data type of the actual argument does not match the definition to verify function. Trivial fix. 
tested: jam (gnu)
 2014-06-04 09:08:17 -05:00
HDF Tester
4a8b02f838 [svn-r25216] Snapshot version 1.9 release 182 2014-05-25 06:51:16 -05:00
HDF Tester
2c12b5d42d [svn-r25199] Snapshot version 1.9 release 181 2014-05-18 04:53:32 -05:00
HDF Tester
0774c92383 [svn-r25181] Snapshot version 1.9 release 180 2014-05-11 07:01:22 -05:00
Scot Breitenfeld
1ab0de9861 [svn-r25173] Removed unused module TH5F. 
Tested: jam (intel, pgi)
 2014-05-07 10:57:01 -05:00
Scot Breitenfeld
fb7e8562e2 [svn-r25169] Removed duplicate tests in fortranlib_test_1_8.f90 and fortranlib_test.f90. Thus removing the dependency on tH5F.f90, which was causing compilation race-conditions in cmake. 
Tested: jam (gnu)
 2014-05-06 09:18:30 -05:00
HDF Tester
3f5886da9f [svn-r25158] Snapshot version 1.9 release 179 2014-05-04 07:15:58 -05:00
Scot Breitenfeld
a9fa46cf8e [svn-r25133] Rudimentary changes; changed the casting of hid_t_f variables that used a casting of int_f to use a casting of hid_t_f. 
Tested: jam (gnu)
 2014-04-28 16:44:33 -05:00
HDF Tester
9711359755 [svn-r25126] Snapshot version 1.9 release 178 2014-04-27 07:14:13 -05:00
Larry Knox
c6e3e68297 [svn-r25117] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll back fix for removing rpaths from l 
ib files.  The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath co
nfigure option was invoked.
Added instead configure variable hardcode_into_lib=no.  This removes rpath from lib files on Linux
and solaris machines.

Tested with h5committest on jam, koala, ostrich and platypus (cmake), and with configure option --disable-sharedlib-rpath on emu, platypus and quail.
 2014-04-25 16:59:53 -05:00
Dana Robinson
7309bb5ab8 [svn-r25113] Fixed Subversion EOL and executable attributes. No code changes. 2014-04-25 16:27:37 -05:00
HDF Tester
6233002749 [svn-r25034] Snapshot version 1.9 release 177 2014-04-13 04:56:37 -05:00
Allen Byrne
e2bc556949 [svn-r25009] Add missing mod file to install 
Tested: local linux
 2014-04-10 08:27:28 -05:00
Allen Byrne
c0bb145242 [svn-r25002] By Permission: Add missing mod file to install 
Tested: local linux
 2014-04-09 10:11:04 -05:00
Scot Breitenfeld
3677c1cc8e [svn-r25001] Cast as integer to verify routine to remove intel warning. 
Tested: jam (intel)
 2014-04-09 09:45:04 -05:00
Larry Knox
f32690b53c [svn-r24997] Added compiler versions for mpich to settings file and configure summary. 
For make installcheck, compile and run installed examples using the installed scripts.  They were being compiled but not run.
Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled.
Set flag to -O3 in production mode for Intel compilers other than those with specified other settings.
Gentoo patches:
    Remove unnecessary setting of LD_LIBRARY_PATH from configure.
    Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c.

Tested with h5committest on jam, koala, ostrich and platypus, on emu and kite, and parallel tests on jam, koala and platypus with mpich built with gnu 4.8.2 and with intel compilers.
 2014-04-08 23:55:49 -05:00
Scot Breitenfeld
9cd1a1bb60 [svn-r24986] Comparing REALs now converts all REALs to double precision and then compares if the two numbers are equivalent. 
Tested: jam (gnu, intel)
 2014-04-08 14:34:42 -05:00
Scot Breitenfeld
d1f2b1a682 [svn-r24985] reverted the r24984 update. 2014-04-07 20:00:24 -05:00
Scot Breitenfeld
ff9a10cfda [svn-r24984] Added overload operatorZ to compare REALs for tests. 
Tested on jam (gfortran, (-r8))
 2014-04-07 19:18:20 -05:00
Elena Pourmal
849177c7b6 [svn-r24979] Maintenance: Addressed DT failures on emu in 64-bit mode and on macs, linux, powerpc 
for non-standard sizes of reals.

Platforms tested: jam, ostrich, platypus, kite, quail, emu
 2014-04-07 12:05:22 -05:00
Scot Breitenfeld
f6a04cded9 [svn-r24978] Removed the .mod (and .raw) files when make clean is issued. 
tested (emu).
 2014-04-07 11:29:23 -05:00
Elena Pourmal
c455fdc4f1 [svn-r24974] Maintenance: Fixed daily tests parallel tests compilation failures 
Platforms tested: jam
 2014-04-07 08:49:00 -05:00
Elena Pourmal
805b1ec23c [svn-r24972] Maintenance: Fixed another typo; see HDFFV-8714 2014-04-06 17:57:04 -05:00
Elena Pourmal
dde80eef11 [svn-r24970] Maintenance: Fixed a typo in a comment line (see HDFFV-8714) 2014-04-06 17:52:44 -05:00
Elena Pourmal
70daa61a87 [svn-r24967] Maintenance: Reorganized and cleaned the code to remove compiler warnings in the Fortran test code 
and examples. 

Platforms tested: Manual testing in place and using srcdir on jam, platypus, and emu with default and 
                  PGI, Intel and new GNU compilers. ifort compiler was also tested with -i8 and -r8 flags
                  on jam.  CMake tested on jam.
 2014-04-06 10:56:21 -05:00
HDF Tester
a9724dfd6c [svn-r24966] Snapshot version 1.9 release 176 2014-04-06 04:20:59 -05:00
Scot Breitenfeld
79a891c241 [svn-r24959] Updated the development procedures. 2014-04-03 15:51:16 -05:00
Allen Byrne
5f4562b2ea [svn-r24954] HDFFV-8700: lowercase CMake commands 2014-04-03 10:34:08 -05:00
Scot Breitenfeld
e26b78a04b [svn-r24953] Fixed --enable-production compilation error using Sun compilers. 
Tested (emu)
 2014-04-03 10:18:42 -05:00
Scot Breitenfeld
b0bdd25417 [svn-r24952] Fixed -i8 -r8 error with optimization on jam using intel compiler. 
Tested: jam (intel)
 2014-04-03 10:01:21 -05:00
Scot Breitenfeld
b87b1c965d [svn-r24951] Changed ordering of initiation of variable to remove warnings using sun compilers. 
Tested: emu
 2014-04-03 09:35:54 -05:00
Allen Byrne
98bbf4a36a [svn-r24948] Group tests by Common name 
Remove WIN32 AND NOT CYGWIN if blocks - should be just WIN32

Tested: local linux CMake
 2014-04-02 13:35:01 -05:00
Scot Breitenfeld
5555f057ae [svn-r24945] Fixed failed test on jam with intel compilers and -i8 -r8 
Tested: jam (intel)
 2014-04-02 09:17:14 -05:00
Scot Breitenfeld
c86aedeba1 [svn-r24939] Fix for HDFFV-8309 Fortran wrappers for H5Pget/set_file_image functions 
Tested: jam (gnu, intel, pgi)
 2014-04-01 10:15:26 -05:00
Dana Robinson
d01ee66666 [svn-r24937] Adds an H5free_memory() function to the library for use with 
functions that return library-allocated memory. The test and tool
code were modified to use this new function where it's appropriate.

Fixes HDFFV-7710, HDFFV-8519, and HDFFV-8551

Tested on:
    64-bit Windows 7 w/ VS2012
    32-bit LE linux w/ parallel and fortran (jam)
    32-bit LE linux w/ fortran and C++ (jam)
 2014-03-31 18:35:09 -05:00
Allen Byrne
c6fe8c70b2 [svn-r24932] HDFFV-8290: Remove unnecessary $(srcdir) and use AM_CPPFLAGS instead of INCLUDES. Update automake to 1.14.1 
h5committest
 2014-03-31 12:07:05 -05:00
HDF Tester
d6cd6cabc2 [svn-r24924] Snapshot version 1.9 release 175 2014-03-30 04:18:22 -05:00
Allen Byrne
448e1e05f1 [svn-r24904] Revert includes move 2014-03-26 09:38:18 -05:00
Allen Byrne
1e1f754fb0 [svn-r24903] Correct mod install lists 
Tested: local linux
 2014-03-26 09:36:08 -05:00
Allen Byrne
9db0c02b96 [svn-r24899] Add msmpi fortran libs to FindMPI 2014-03-25 16:57:30 -05:00
Allen Byrne
425408b5a1 [svn-r24895] Add INTERFACE properties to libs 2014-03-25 13:25:53 -05:00
Scot Breitenfeld
8b27024edd [svn-r24888] Cleaned-up warning errors using --enable-fortran only and gcc 4.8.2 
tested: gcc (4.8.2, jam)
 2014-03-24 16:20:14 -05:00
Allen Byrne
63e1b32068 [svn-r24886] Fix fortran mod file handling and packing 2014-03-24 16:00:34 -05:00
Allen Byrne
810285be8e [svn-r24876] Move includes command up before all programs 2014-03-24 11:29:13 -05:00
Scot Breitenfeld
958a762dd1 [svn-r24866] Fixed compiler warnings using gnu 4.8.1 
Tested: jam( intel, gnu, pgi)
 2014-03-22 15:01:58 -05:00
Quincey Koziol
2e4302818a [svn-r24864] Description: 
Remove all traces of MPI-POSIX VFD and GPFS detection/code.

    Remove remaining traces of stream VFD.

    Remove testpar/t_posix_compliant test (it's not actually verifying anything).

    Clean up H5D__mpio_opt_possible() further.

    Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).

    A few other small code cleanups.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/parallel & serial
 2014-03-21 18:02:24 -05:00
Allen Byrne
c4f982abf1 [svn-r24859] Remove unnecessary use of $(srcdir). 
Tested: local linux, h5committest
 2014-03-21 13:50:30 -05:00
Scot Breitenfeld
6515a1f8ac [svn-r24856] added missing common statement 2014-03-21 09:34:05 -05:00
Scot Breitenfeld
6c13c99ce9 [svn-r24855] added missing dllexport 2014-03-21 09:28:03 -05:00
Scot Breitenfeld
34bfba14d5 [svn-r24846] Bug fix for HDFFV-8689 : Mix-match of type in H5D_CHUNK_CACHE_NBYTES_DEFAULT, Review HDF5-184 
Tested with -i8 flag with intel compilers and --enable-production
 2014-03-20 09:06:42 -05:00
Allen Byrne
03d10edd23 [svn-r24824] HDFFV-8700 - 
KitWare recommendations: Change CMake commands to lower case.
Bump up CMake minimum versions.
Split test file into separate file for h5repack test.

Tested: local linux
 2014-03-18 11:21:46 -05:00
Allen Byrne
f5689224b5 [svn-r24789] Bump up the minimum cmake version 2014-03-13 10:05:09 -05:00
Scot Breitenfeld
b17f3e4183 [svn-r24783] fixed typo 2014-03-12 09:20:47 -05:00
Allen Byrne
6c5e74942d [svn-r24782] HDFFV-8700 - 
KitWare recommendations: Change CMake commands to lower case.
 2014-03-11 17:07:13 -05:00
Allen Byrne
a3292a77ce [svn-r24781] HDFFV-8700 - 
KitWare recommendations: Change CMake commands to lower case.
Remove INCLUDE_DIRECTORIES in src for target level includes.
Change ADD_DEFINITIONS package debug defines into CMake option.
Remove -DNDEBUG
 2014-03-11 16:14:57 -05:00
HDF Tester
4a9ea60adc [svn-r24770] Snapshot version 1.9 release 174 2014-03-09 05:17:47 -05:00
HDF Tester
f683d9a035 [svn-r24753] Snapshot version 1.9 release 173 2014-03-02 04:16:37 -05:00
Quincey Koziol
1162465570 [svn-r24727] Description: 
Revert change of sprintf -> snprintf, due to failures on Windows.  We'll
need to figure out the correct course of action in the future.

Tested on:
    MacOSX/64 10.9.1 (amazon) w/C++, FORTRAN
    (too minor to require h5committest)
 2014-02-21 11:53:33 -05:00
Quincey Koziol
1e36b5a348 [svn-r24726] Description: 
Revert some earlier usage of strncpy, which was incorrect.

    Bring Coverity changes from branch back to trunk:

r20821:
    Use HDstrncpy. --gh
    (Fixed already, with strdup)

r20822:
    (Not merged, incorrect use of HDstrncpy())

r20823:
    (Not merged, incorrect use of HDstrncpy())

r20824:
    Maintenance: Bug fix: addressed CID 666.
    Value stored at *expression_len should be used in the call to
        HD5packFstring to avoid overflow (and unnecessary arithmetic
        calculation and casting) 

r20825:
    Issue 642: Added check for error and handler with print to stderr and exit.

r20826:
    Undo revision 20818, as that issue has already been fixed in the 1.8 branch
        and trunk (but not coverity branch)

r20827:
    (Not merged, incorrect use of HDstrncpy())
    
r20828:
    Use HDstrncpy. --gh
    (Corrected use of strncpy())

r20829:
    Check return of H5Lget_val(print_udata->fid, path, targbuf,
        linfo->u.val_size + 1, H5P_DEFAULT) and if error set trgbuf[0] to 0.
        Check if  H5Lunpack_elink_val(targbuf, linfo->u.val_size, NULL,
        &filename, &objname) was successful and allow print. Otherwise filename
        and objname are not created. (init those to NULL)

r20830:
    resolved coverity issues 939, 940, 941, 944, and 947.

    all were complaints about use of sprintf, and in all cases, the
    buffers used were large enough for all eventualities.

    Resolved issue by replacing calls to sprintf with calls
    to snprintf.

r20831:
    Maintenance: Addressed CID 852
    Replaced sprintf with snprintf

r20832:
    Purpose: Fix valgrind issues with hl/examples/ex_image2

    Description:
    Modified hl/examples/ex_image2 to free global "gbuf" before exit.

Tested on:
    Mac OSX/64 10.9.1 (amaon) w/C++, FORTRAN & Threadsafety
    (too minor to require h5committest)
 2014-02-20 16:29:26 -05:00
HDF Tester
d7f00b8002 [svn-r24716] Snapshot version 1.9 release 172 2014-02-16 03:32:48 -05:00
HDF Tester
1b6683e58f [svn-r24698] Snapshot version 1.9 release 171 2014-02-09 03:36:37 -05:00
Scot Breitenfeld
ecc60884a8 [svn-r24697] Fix for: 
HDFFV-8651: H5F_Provisional missing from HDF5mpio.f90

Tested: jam (mpi 3.0.4/gnu)
 2014-02-07 16:45:23 -05:00
Allen Byrne
6569d7437a [svn-r24682] Add IF SHARED block around Windows PDB file generation command. 2014-02-04 10:11:36 -05:00
HDF Tester
ddf75b10f6 [svn-r24676] Snapshot version 1.9 release 170 2014-02-02 03:34:20 -05:00
Scot Breitenfeld
4a428e25b8 [svn-r24636] typesetting changes for documentation 2014-01-17 16:10:29 -05:00
Scot Breitenfeld
d4d0407a87 [svn-r24623] Enabled test for 
HDFFV-8268 Fortran wrapper for H5Fget_file_image function

Tested: jam (pgi compilers)
        h5committest
 2014-01-08 15:21:32 -05:00
Scot Breitenfeld
1febc8a453 [svn-r24611] This is a partial fix for HDFFV-8634. It fixes the problem without --enable-fortran2003, where the optional parameter should not be given as an option for an interface to a C function. --enable-fortran2003 does not work due to a compiler bug in intel 14.0 
Tested: kite (intel 14.0 with --enable-fortran)
 2014-01-06 10:53:56 -05:00
HDF Tester
bc09cdc302 [svn-r24465] Snapshot version 1.9 release 169 2013-11-24 22:31:26 -05:00
Allen Byrne
819b8099e2 [svn-r24392] Cleanup testfiles from scripts. Update lists of files to be cleaned. CMake update to clean testfiles. 
Tested: local cmake, autools, and h5committest
 2013-11-01 16:15:37 -05:00
Dana Robinson
e6cace9ee4 [svn-r24376] Updated all code to use HDmalloc, HDcalloc, and HDfree. 
Prep work for adding a memory free function, part of HDFFV-8551.

Tested on:
    32-bit LE linux (jam) 
        * with C++, Fortran
        * with thread safety on

    These are minor changes (almost entirely renaming foo functions
    to HDfoo) that don't change functionality.  This should not
    require a full commit test.
 2013-10-30 23:20:36 -05:00
HDF Tester
56803a1970 [svn-r24362] Snapshot version 1.9 release 168 2013-10-27 04:33:34 -05:00
HDF Tester
8538cf61f9 [svn-r24334] Snapshot version 1.9 release 167 2013-10-20 04:21:31 -05:00
HDF Tester
5092f5a30e [svn-r24287] Snapshot version 1.9 release 166 2013-10-13 03:43:04 -05:00
HDF Tester
a4ab8b0e1d [svn-r24218] Snapshot version 1.9 release 165 2013-09-29 03:41:59 -05:00
Larry Knox
ab239810e1 [svn-r24194] Don't add hdf5 library dependencies to lib files when --disable-sharedlib-rpath configure option is invoked. Fix for HDFFV-8276. 
Tested with h5committest and on hdf-duck.
 2013-09-23 20:14:24 -05:00
HDF Tester
f9a758f442 [svn-r24186] Snapshot version 1.9 release 164 2013-09-22 04:17:20 -05:00
Larry Knox
2c6fc585fd [svn-r24114] Reverting the changes in r24113 for now because they break parallel make fortran. The changes aren't incorrect, but more work in needed on dependencies and also for enable-parallel. 
Reverted to r24112.
 2013-09-06 17:42:10 -05:00
Quincey Koziol
f825256c87 [svn-r24113] Description: 
Reduce warnings w/gfortran in FORTRAN build by declaring interface for
utility test routines.

Tested on:
    Mac OSX/64 10.8.4 (amazon) w/gcc/g++/gfortran 4.8
 2013-09-06 15:27:13 -05:00
Quincey Koziol
5b876c929f [svn-r24101] Description: 
Clean up warnings, enable new compiler warning flag(s) and bring back
changes from Coverity branch:

r20813:
Remove the dead code as listed for coverity bug #1722. h5committested.

r20814:
Issue 69: Check return value and throw error if negative return. Also free datatype id on error

r20815:
Use HDstrncpy. --gh

r20816:
Replaced one last HDstrcat call with HDstrncat to resolve coverity issue 832.

r20817:
Use HDstrncpy and HDstrncat. --gh

r20818:
Purpose: Fix valgrind issues with h5jam

Description:
Modified h5jam to free strings strdup'd in parse_command_line before exit. Note
that they may still not be freed in case of error, due to the widespread use of
exit().

r20819:
Issue 80: change loop to use int as loop index.

r20820:
Maintenance: Fixed the bug found by coverity CID 788
There were two problems with this function:
    1) it tried to unnecessary free NULL pointer
    2) it tried to allocate c_name buffer that is done by H5Pget_class_name


Tested on:
    Mac OSX 10.8.4 (amazon) w/gcc 4.8.1, C++ & FORTRAN
    (too minor to require h5committest)
 2013-09-05 15:44:14 -05:00
HDF Tester
a4294ab3cc [svn-r24092] Snapshot version 1.9 release 163 2013-09-01 03:37:42 -05:00
Larry Knox
d24404ae83 [svn-r24077] Updated -help output for compile scripts for changing default from -noshlib to -shlib when hdf5 is built without static libraries (--disable-static). 
Tested with h5committest on jam, koala, ostrich and platypus.
 2013-08-27 08:26:37 -05:00
HDF Tester
ca60bda9fb [svn-r24068] Snapshot version 1.9 release 162 2013-08-25 03:44:51 -05:00
Allen Byrne
c502d81a8c [svn-r24029] Move TESTS to seperate file to allow easier editing by all developers. 
Tested: local linux
 2013-08-19 16:49:44 -05:00
Quincey Koziol
308c378ccd [svn-r24020] Description: 
Clean up compiler warnings

Tested on:
    Mac OSX/64 10.8.4 (amazon) w/C++ & FORTRAN
    (too minor to require h5committest)
 2013-08-17 15:05:27 -05:00
Allen Byrne
33d5f5d1e8 [svn-r24004] HDFFV-8319 and -8321: Cleanup autotools code. 
Also remove GetConsoleScreenInfo check from cygwin configure.

Tested: h5committest
 2013-08-13 12:53:23 -05:00
HDF Tester
407d3db6a4 [svn-r23989] Snapshot version 1.9 release 161 2013-08-11 03:37:02 -05:00
HDF Tester
f1b5d46cd0 [svn-r23968] Snapshot version 1.9 release 160 2013-08-04 03:35:17 -05:00
HDF Tester
f26b04712e [svn-r23926] Snapshot version 1.9 release 159 2013-07-21 03:38:01 -05:00
HDF Tester
4e12ec74ae [svn-r23895] Snapshot version 1.9 release 158 2013-07-14 03:31:23 -05:00
HDF Tester
3cb8efae13 [svn-r23865] Snapshot version 1.9 release 157 2013-07-07 03:33:31 -05:00
HDF Tester
a157eb2f68 [svn-r23849] Snapshot version 1.9 release 156 2013-06-30 03:35:12 -05:00
HDF Tester
6fedfb6124 [svn-r23806] Snapshot version 1.9 release 155 2013-06-23 03:36:24 -05:00
HDF Tester
bdbd06d85d [svn-r23778] Snapshot version 1.9 release 154 2013-06-16 03:34:51 -05:00
Allen Byrne
feb14ea872 [svn-r23745] HDFFV-8461: Add Windows /MT support 
This adds the UserMacros.cmake support needed.
 2013-06-10 12:46:48 -05:00
HDF Tester
70d440330d [svn-r23741] Snapshot version 1.9 release 153 2013-06-09 03:39:22 -05:00
HDF Tester
177a90f97a [svn-r23718] Snapshot version 1.9 release 152 2013-05-26 03:56:00 -05:00
HDF Tester
c09748b14e [svn-r23708] Snapshot version 1.9 release 151 2013-05-19 03:39:09 -05:00
HDF Tester
8f3aee85de [svn-r23669] Snapshot version 1.9 release 150 2013-05-05 03:32:05 -05:00
HDF Tester
1f09e9d19e [svn-r23642] Snapshot version 1.9 release 149 2013-04-28 03:37:26 -05:00
Allen Byrne
ed5a2bc1c1 [svn-r23614] Remove subfolders for includes 2013-04-23 12:50:15 -05:00
Scot Breitenfeld
c61fb7260a [svn-r23585] changed the integer kind in the enum to satisfy g95. 
Tested: jam (g95, gfortran)
 2013-04-14 16:19:40 -05:00
Scot Breitenfeld
337242feea [svn-r23576] added missing argument in check call. 
tested: jam (g95,gcc))
 2013-04-11 14:40:57 -05:00
Larry Knox
0b16cecb99 [svn-r23527] Revised usage to reflect change to use -shlib as default when no static libraries were built. 
No test - text only revision of compile scripts.
 2013-04-02 17:54:20 -05:00
Scot Breitenfeld
1b6963230b [svn-r23516] Updated documentation. 2013-04-01 19:58:44 -05:00
Raymond Lu
6c974c824d [svn-r23495] ported revisions 23433:23494 from the trunk 2013-03-29 18:13:05 -05:00
Larry Knox
99b1524474 [svn-r23431] Fix for HDFFV-8141. 
Changes default value for USE_SHARED_LIB in compile scripts to yes when static is disabled.
Comments in scripts about the order of flag variables containing library paths was also corrected.

Tested with h5committest on duck, jam, koala, and ostrich in addition to specific testing for the 
compile script change.
 2013-03-22 16:02:07 -05:00
Scot Breitenfeld
626fb1b02f [svn-r23379] HDFFV-8297 h5fc does not recognize files ending in .f95, .f03, and .f08 as source files 
added missing extensions.

Tested: jam (gnu)
 2013-03-18 23:14:59 -05:00
HDF Tester
e188e7797b [svn-r23361] Snapshot version 1.9 release 148 2013-03-17 03:28:21 -05:00
HDF Tester
c896a5b7eb [svn-r23341] Snapshot version 1.9 release 147 2013-03-10 04:34:50 -05:00
Scot Breitenfeld
ebb18c5186 [svn-r23325] Description 
------------

Fix for:
HDFFV-8149: h5pset_external_f API - the offset is declared integer which can cause problem if use 64-bit integer  

Added new type off_t, modified source files and added a new test.

Tested (jam, intel, gnu)
 2013-03-05 00:06:59 -05:00
HDF Tester
1cffcb401a [svn-r23323] Snapshot version 1.9 release 146 2013-03-03 11:20:00 -05:00
HDF Tester
66ba0b4f33 [svn-r23311] Snapshot version 1.9 release 145 2013-02-24 11:26:03 -05:00
Allen Byrne
aff5c20a6a [svn-r23305] HDFFV-8257: szip still used even if headers are not found. Change configure to test the result of the CHECK HEADERS call before checking for the library. 
Tested: local linux, h5committest
 2013-02-18 15:56:21 -05:00
Scot Breitenfeld
f3da4919c4 [svn-r23297] Temporary fix: PGI COMPILERS seem to have a bug in the INQUIRE function, 
waiting for an answer from PGI how to resolve the problem.

Tested: jam (pgi compiler)
 2013-02-18 10:28:36 -05:00
Scot Breitenfeld
2ec529c035 [svn-r23296] Fix HDFFV-8312: Problem using NAG compiler and F2003 interface 
added character bounds for C_LOC arguments.

Tested: jam (gnu)
 2013-02-17 22:46:06 -05:00
Scot Breitenfeld
4e08487549 [svn-r23295] Did not intend to check in this file with the previous ci. 
reverted check in.
 2013-02-17 22:10:17 -05:00
Scot Breitenfeld
a4521b7901 [svn-r23294] Related to: HDFFV-8265 
Fortran2003 option does not work under windows; Need to manage .def files more efficiently

Changed the comment notes from adding to the 'hdf5_fortrandll.def' to instead adding
to the 'hdf5_fortrandll.def.in' file.
 2013-02-17 21:22:29 -05:00
Scot Breitenfeld
a976ca99a9 [svn-r23293] Fix for HDFFV-8268: Fortran wrapper for H5Fget_file_image function. 
Tested: (jam, gnu,intel compilers)
 2013-02-17 21:01:18 -05:00
HDF Tester
32da9c96ae [svn-r23290] Snapshot version 1.9 release 144 2013-02-17 11:30:06 -05:00
Scot Breitenfeld
9d07161dd9 [svn-r23248] Made modification of comments for h5rget_name_*f for the loc_id identifier. 
Cleaned up comments.
 2013-02-11 20:28:08 -05:00
HDF Tester
944f0399ac [svn-r23240] Snapshot version 1.9 release 143 2013-02-10 11:25:10 -05:00
Scot Breitenfeld
386f73823a [svn-r23236] Fix for: HDFFV-8223 
Write a Fortran test for conversion fron enum to numeric type 

Tested (jam, gnu, intel)
 2013-02-07 19:28:55 -05:00
HDF Tester
b65a911b8a [svn-r23221] Snapshot version 1.9 release 142 2013-02-03 11:20:03 -05:00
HDF Tester
37d1a0330a [svn-r23180] Snapshot version 1.9 release 141 2013-01-20 11:23:56 -05:00
Allen Byrne
2fba171a67 [svn-r23160] HDFFV-8227: Mac DARWIN requires CMake 2.8.10 2013-01-14 13:35:30 -05:00
HDF Tester
2381dacdad [svn-r23153] Snapshot version 1.9 release 140 2013-01-13 11:18:18 -05:00
HDF Tester
c1b0e4f686 [svn-r23136] Snapshot version 1.9 release 139 2013-01-06 11:19:19 -05:00
Scot Breitenfeld
99af0ce575 [svn-r23134] Revised the comments to reflect what is in the F2003 standard. 2013-01-03 19:49:06 -05:00
HDF Tester
72e8ef707b [svn-r23121] Snapshot version 1.9 release 138 2012-12-30 11:18:08 -05:00
HDF Tester
d1b7de066e [svn-r23119] Snapshot version 1.9 release 137 2012-12-23 11:31:26 -05:00
Dana Robinson
7b5b6d239e [svn-r23111] Purpose: 
Fixes for HDF5 1.8.10 p1

HDFFV-7975
Changed the max single I/O operation size on Darwin/Mac OS X.

HDFFV-8124 and HDFFV-8158
Fixed a core VFD bug when large blocks of data are read.

HDFFV-8246
Added more fields to the VFD read/write error messages.

Tested on:
64-bit Windows 7, Visual Studio 2010, CMake
64-bit Mac OS X Snow Leopard (Fred), Fortran, C++
64-bit BE Linux (Ostrich), Fortran, C++
32-bit LE Linux (jam), Fortran, C++ (also parallel w/ Fortran)
 2012-12-19 16:51:55 -05:00
Scot Breitenfeld
a692fe88cd [svn-r23105] Changed Fortran examples to reflect tutorial examples via Barbara; 
added: h5_cmprss.f90

Tested: jam (gnu compilers)
 2012-12-15 17:59:00 -05:00
Scot Breitenfeld
8dc9f39570 [svn-r23093] Fixed API to be 1.6 compliant, removed deprecated APIs 
Checked: jam (gnu, mpi) --disable-deprecated-symbols, --with-default-api-version=v16
 2012-12-12 09:56:39 -05:00
Scot Breitenfeld
e92f4b1a7c [svn-r23092] Cleaned-up printed output and corrected output comments 
Tested: jam (gnu)
 2012-12-11 23:30:22 -05:00
Scot Breitenfeld
3079b8dde8 [svn-r23090] Fixed H5Dread input parameters. 
Tested: gnu (jam)
 2012-12-11 08:39:39 -05:00
Scot Breitenfeld
02fb07aa85 [svn-r23089] Changed Fortran examples to reflect changes in documentation via Barbara; 
mainly program name changes. Two new examples added: h5_extend.f90 h5_subset.f90 and
example fileexample.f90 was removed.

Tested: jam (gnu compilers)
 2012-12-10 17:41:13 -05:00
Scot Breitenfeld
17fd0e9ce4 [svn-r23088] Changed Fortran examples to reflect changes in documentation via Barbara; 
mainly program name changes. Two new examples added: h5_extend.f90 h5_subset.f90 and
example fileexample.f90 was removed.

Tested: jam (gnu compilers)
 2012-12-10 17:30:38 -05:00
HDF Tester
f89d080191 [svn-r23085] Snapshot version 1.9 release 136 2012-12-09 11:14:57 -05:00
HDF Tester
0de4e03305 [svn-r23071] Snapshot version 1.9 release 135 2012-12-02 09:57:47 -05:00
Allen Byrne
5697dc8f80 [svn-r23066] HDFFV-8265: create .def file during configure, added F2003 optional functions and refactor ISO_C_BINDING usage in cmake files 
Tested: local cmake
 2012-11-29 09:50:21 -05:00
Allen Byrne
b3c12e8d55 [svn-r23057] HDFFV-8265: create .def file during configure 
Tested: windows
 2012-11-27 10:53:30 -05:00
Allen Byrne
e5d4ba944f [svn-r23053] Remove deleted file from CMake build list 2012-11-26 08:56:29 -05:00
Scot Breitenfeld
e53f4cce8a [svn-r23052] Description: 
Removed example grpit.f90 which used undocumented/obsolete APIs, The equivalent and up-to-date example
to transverse through a file would be the example h5ex_g_traverse_F03.f90 in hdf5-examples.
 2012-11-25 22:08:02 -05:00
HDF Tester
48b241d52d [svn-r23050] Snapshot version 1.9 release 134 2012-11-25 09:47:11 -05:00
HDF Tester
9ac4fea3b0 [svn-r23039] Snapshot version 1.9 release 133 2012-11-18 09:57:04 -05:00
HDF Tester
82868270dc [svn-r23021] Snapshot version 1.9 release 132 2012-11-11 09:56:57 -05:00
Larry Knox
33504deb83 [svn-r22908] Reverted changes in revision 22819 
Tested with h5committest on jam, koala and ostrich.
 2012-10-16 16:38:58 -05:00
Scot Breitenfeld
2f798dc842 [svn-r22897] Cleaned up the comments, formatted for automatic documentation. 2012-10-12 22:23:47 -05:00
Scot Breitenfeld
777884558a [svn-r22896] Updated the robodoc resource file with new keywords and new options 
for generating the documentation.
 2012-10-12 22:22:38 -05:00
Scot Breitenfeld
ac472bb111 [svn-r22876] Fixed exporting subroutines that will not be compiled if --enable-fortran2003 
was not used.
 2012-10-09 18:59:33 -05:00
Scot Breitenfeld
223bdd1173 [svn-r22859] Fixed new functions that are used in the _F03 files, updated to reflect the correct 
module they are in.
 2012-10-03 15:05:25 -05:00
Allen Byrne
9603f61cda [svn-r22857] Change def list of RGET_REGION to match other types declarations 2012-10-03 13:55:57 -05:00
Scot Breitenfeld
3e59374ccd [svn-r22854] Fixed issues with default 8-byte real and default 8-byte integers and the new H5O routines. 
Tested: jam (gcc,intel)
 2012-10-02 19:53:21 -05:00
Allen Byrne
7648354b80 [svn-r22853] Change def list of RGET_REGION to match other types declarations 2012-10-02 12:53:03 -05:00
HDF Tester
d4657ce265 [svn-r22846] Snapshot version 1.9 release 131 2012-09-30 09:46:20 -05:00
Scot Breitenfeld
51bb0fe2d2 [svn-r22843] Renamed variable to match C. 
Tested: jam (gnu, mpich)
 2012-09-28 15:42:33 -05:00
Scot Breitenfeld
cc2669fedf [svn-r22842] Fixed typo in variable. 
Tested: jam (gnu,mpich)
 2012-09-28 15:29:38 -05:00
Scot Breitenfeld
08a5424f60 [svn-r22839] removed unused variable. 
tested: jam (pgi compiler)
 2012-09-28 09:48:12 -05:00
Scot Breitenfeld
5fba5c2e3a [svn-r22838] Fixed typo in variable name. 
Tested: jam (pgi compiler)
 2012-09-28 08:36:39 -05:00
Scot Breitenfeld
485b5dea69 [svn-r22829] Fixed merge mistake, merge removed part of the subroutine. 
tested: jam (intel)
 2012-09-27 15:24:03 -05:00
Scot Breitenfeld
7b9929e309 [svn-r22828] 
HDFFV-8007:Add missing H5O Fortran functions 

Added new F03 test file for new H5O functions.
 2012-09-27 14:48:54 -05:00
Scot Breitenfeld
0878e52087 [svn-r22827] HDFFV-8007: Add missing H5O Fortran functions. 
Tested: jam(gnu,intel)
 2012-09-27 14:43:48 -05:00
Scot Breitenfeld
393852a414 [svn-r22826] Fix for: HDFFV-7903 Fortran problem writing control character to a dataset 
reconfigured
 2012-09-27 14:21:45 -05:00
Scot Breitenfeld
32a131ea70 [svn-r22825] Fix for: HDFFV-7903 Fortran problem writing control character to a dataset 
Tested: (jam, gfortran)
 2012-09-27 14:20:09 -05:00
Scot Breitenfeld
a81cc2ac7e [svn-r22824] FIX: HDFFV-8118: Support Fortran compiler flags that change the default size of integer and real 
Tested: jam(gnu,intel), machine with gcc 4.7 and C long double = 16 bytes.
 2012-09-27 14:13:13 -05:00
Scot Breitenfeld
0710ab3955 [svn-r22823] Fix for HDFFV-7658: Add FORTRAN interface for H5Pget_mpio_actual_io_mode API routine 
Test: jam (gnu)
 2012-09-27 10:59:40 -05:00
Scot Breitenfeld
dbf542c008 [svn-r22822] Fix for HDFFV-7658: Add FORTRAN interface for H5Pget_mpio_actual_io_mode API routine 
Test: jam (gnu)
 2012-09-27 10:58:54 -05:00
Larry Knox
c5371d7618 [svn-r22819] Added H5BLD_STATIC and HDF5_USE_SHLIB to configure.ac so that if configured with --disable-static the default for HDF5_USE_SHLIB in the compile scripts will be changed to yes. This is a fix for HDFFV-8141, where the compile scripts try to link to non-existant static hdf5 libraries. 
Tested on jam,koala,ostrich(h5committest) and other THG machines.
 2012-09-26 23:49:19 -05:00
HDF Tester
528bd520b8 [svn-r22802] Snapshot version 1.9 release 130 2012-09-23 09:32:56 -05:00
HDF Tester
786b220e46 [svn-r22766] Snapshot version 1.9 release 129 2012-09-16 09:27:43 -05:00
HDF Tester
0824b43ecd [svn-r22745] Snapshot version 1.9 release 128 2012-09-09 09:43:15 -05:00
Scot Breitenfeld
fa7b8028af [svn-r22738] Fix for Windows and DLLEXPORT if statement. 
Tested: jam (gnu)
 2012-09-05 11:52:13 -05:00
Scot Breitenfeld
1c9e159ffe [svn-r22737] Fix for HDF5 HDFFV-8109 H5S_UNLIMITED_F has a wrong type 
Tested: jam (gnu)
 2012-09-04 22:46:58 -05:00
Scot Breitenfeld
7740e853f4 [svn-r22736] Fix for HDFFV-8132: Compile problem w/NAG Fortran due to too many continuation lines. 
Tested: jam (gnu)
 2012-09-04 19:59:46 -05:00
HDF Tester
3ab17f5e04 [svn-r22732] Snapshot version 1.9 release 127 2012-09-02 09:34:02 -05:00
Allen Byrne
b257bab294 [svn-r22720] Fix RelWithDebInfo packaging 2012-08-28 12:39:30 -05:00
Allen Byrne
5d88bae6df [svn-r22714] one more missed VAR change for parallel examples 2012-08-26 14:10:01 -05:00
Allen Byrne
1f8fb63581 [svn-r22709] HDFFV-8129: reconfigured on jam, Remove overloading of autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files. 
Tested: h5committest
 2012-08-23 11:07:43 -05:00
Larry Knox
edf83e5d1f [svn-r22706] Updated autotools: autoconf 2.69, automake 1.12.3, m4 1.4.16, libtool 2.4.2 
Tested THG machines.
 2012-08-22 00:00:32 -05:00
HDF Tester
1560a6ea38 [svn-r22697] Snapshot version 1.9 release 126 2012-08-19 09:35:47 -05:00
HDF Tester
2eb782130a [svn-r22670] Snapshot version 1.9 release 125 2012-08-12 15:28:06 -05:00
Larry Knox
456b97b9fa [svn-r22629] Snapshot version 1.9 release 124 2012-08-05 13:42:13 -05:00
Larry Knox
9e79829ab8 [svn-r22525] Snapshot version 1.9 release 124 2012-07-09 11:54:50 -05:00
Scot Breitenfeld
ce47ef777f [svn-r22510] Enabled the compilation of tH5E_F03.f90 2012-07-02 20:16:45 -05:00
Elena Pourmal
732ae085dc [svn-r22504] Maintenance: 
See HELPDESK-643 issue in JIRA.
NAG Fortran compiler doesn't like the current tH5E_F03.f90 file that has only comments
and no executable statements. Removed tH5E_F03.f90 from the list of modules to build.

Tested on jam with Intel compiler using --enable-fortran2003 flag.
 2012-06-29 15:39:42 -05:00
HDF Tester
02a0bd53e8 [svn-r22487] Snapshot version 1.9 release 122 2012-06-24 09:29:36 -05:00
Elena Pourmal
24b1316f8b [svn-r22482] Maintenance: 
- Fixed a typo in return value of the nh5dread_f_c function ( was 1
      instead of 0 on success); fixed the return value to make it consistent
      with other Fortran functions; cleaned the code from debug statements.

Platforms tested: jam with GNU and Intel compilers, fortran 2003 feature.
 2012-06-23 18:31:40 -05:00