* commit 'd3ef866a2963ce93d0b95184534a70849b6fa11d':
Revise API for H5get_alloc_stats() to take a struct instead of separate values.
Move the GNU warnings configuration under config/gnu-warnings/ and trim the filename prefixes. Update config/gnu-flags to suit.
Fixed the RELEASE.txt note for HDFFV-11057
Fix shutdown errors when using the HDF5_VOL_CONNECTOR environment variable to set a dynamically loaded plugin as the default VOL connector. Fixes HDFFV-11057
Fix threadsafe for new test
Fix issues when deserializing point/all/none selection with version beyond the library's supported version: (1) Verify the decoded version before proceeding further with deserialization (2) Close the dataspace if errors occurred after opening the dataspace
Very minor comment change in H5VLconnector.h.
Add routines to query the library's free list sizes and allocation stats.
By default, demote warnings promoted to errors back to warnings.
Incorporate the H5_ECFLAGS into the library CFLAGS. Now a bunch of errors will occur. Next commit will demote the warnings promoted to errors back to warnings again.
Break out warnings into more files that autoconf and CMake can share. This change temporarily disables the warnings that were promoted to errors, but I will add those warnings back as warnings, not errors, in the next commit.
Avoid a crash, don't check if we're flushing when the file is closing: there's no need to check if the metadata cache is flushing if we already know the file is closing, because the condition we rely on is "closing OR flushing." Further, the cache may have already gone away, so sometimes calling into the cache to see if it's flushing will crash the program.
* commit 'd3ef866a2963ce93d0b95184534a70849b6fa11d':
Revise API for H5get_alloc_stats() to take a struct instead of separate values.
Add routines to query the library's free list sizes and allocation stats.
* commit 'b51585a9110c4322c52f9dcdc60cd26c3ea44546':
Revise API for H5get_alloc_stats() to take a struct instead of separate values.
Add routines to query the library's free list sizes and allocation stats.
* commit 'e916acd018d5a307e7690a7978a1b73e83508f2b':
Move the GNU warnings configuration under config/gnu-warnings/ and trim the filename prefixes. Update config/gnu-flags to suit.
By default, demote warnings promoted to errors back to warnings.
Incorporate the H5_ECFLAGS into the library CFLAGS. Now a bunch of errors will occur. Next commit will demote the warnings promoted to errors back to warnings again.
Break out warnings into more files that autoconf and CMake can share. This change temporarily disables the warnings that were promoted to errors, but I will add those warnings back as warnings, not errors, in the next commit.
* commit '2f09d8f3c8a4a44932c1b8ffb0f6ea2219059a5c':
Move the GNU warnings configuration under config/gnu-warnings/ and trim the filename prefixes. Update config/gnu-flags to suit.
By default, demote warnings promoted to errors back to warnings.
Incorporate the H5_ECFLAGS into the library CFLAGS. Now a bunch of errors will occur. Next commit will demote the warnings promoted to errors back to warnings again.
Break out warnings into more files that autoconf and CMake can share. This change temporarily disables the warnings that were promoted to errors, but I will add those warnings back as warnings, not errors, in the next commit.
This is triggered by the tests for revised references when the libver bounds setting does not allow version
4 datatype message to be created. The test failure is abort core dumped.
This is due to the datatype initialization fails before the datatype ID is registered.
The datatype cleanup code should provide for the above situation.
The code to fix the problem is the same as what is done in H5D__open_oid().
* commit 'ce7936d2b256bdd5e61a5ef018f35e9562667cac':
Fixed the RELEASE.txt note for HDFFV-11057
Fix shutdown errors when using the HDF5_VOL_CONNECTOR environment variable to set a dynamically loaded plugin as the default VOL connector. Fixes HDFFV-11057
Very minor comment change in H5VLconnector.h.
Modify h5repack to integrate with VOL connectors
Update tools library to accomodate VOL connectors
Update logic in h5tools_fopen for VOL connectors
Add command-line options to h5repack for specifying in/out VOL
connectors
Implement h5tools_set_vol_fapl
Fix library shutdown issue
Integrate ROS3 and HDFS VFDs into new h5tools_get_fapl() scheme
Avoid H5Ocopy in h5repack when using different VOL connectors
Update h5tools_test_utils.c for ROS3 and HDFS integration
* commit '81b1ed4e1724b8a6a731ab2b8fb03234a8b49d15':
Fix issues when deserializing point/all/none selection with version beyond the library's supported version: (1) Verify the decoded version before proceeding further with deserialization (2) Close the dataspace if errors occurred after opening the dataspace
* "Simultaneous and equivalent" Read-Write and Write-Only channels for
file I/O.
* Only supports drivers with the H5FD_FEAT_DEFAULT_VFD_COMPATIBLE flag for
now, preventing issues with multi-file drivers.
Add Mirror VFD to library.
* Write-only operations over a network.
* Uses TCP/IP sockets.
* Server and auxiliary server-shutdown programs provided in a new directory,
`utils/mirror_vfd`.
* Automated testing via loopback ("remote" of localhost).
* commit '093c2c7e69bc4a40e9d49eece1d6fdcf54e8ecb0':
Avoid a crash, don't check if we're flushing when the file is closing: there's no need to check if the metadata cache is flushing if we already know the file is closing, because the condition we rely on is "closing OR flushing." Further, the cache may have already gone away, so sometimes calling into the cache to see if it's flushing will crash the program.
* commit '9abbdeaa66c70a00b6a7bedee9c76d2493a8e947': (31 commits)
Remove system command from valgrind reports
Whitespace
Fix incorrect FUNC_LEAVE macro (should match FUNC_ENTER_*_TAG).
Add semicolons to more PASSED() invocations.
So that I can use PASSED(); anywhere a statement can go, #define PASSED() with a do-while wrapper.
revert type cast
Switch the 'get offset' operation from a dataset 'get' callback to a [native] dataset 'optional' operation.
Modfy expression to match mpicc build with Intel as intel compiler, not gcc.
Complete the comment on thread_main(), explaining why the barrier is used.
Fixed issue building HDF5 with NAG Fortran 7.0.
The first implementation seemed to allow for the possibility that a thread could block at the barrier, wake and exit the barrier, re-acquire the barrier lock and increase `nentered` before the other blocked threads woke and checked `nentered % count == 0`. Then the other blocked threads would check `nentered % count == 0` and, finding it false, go back to sleep in the barrier. This new implementation waits for a looser condition to obtain so that threads don't go back to sleep in the barrier.
Add java version and reference libsettings
Test the right condition for the EBUSY return in pthread_barrier_destroy().
s/exit_failure/EXIT_FAILURE/g
Implement pthread_barrier(3) for Darwin using a counter, condition variable, and mutex. Untested.
Update examples and fix old version references.
Move MODEL check to before usage in CTestScript.cmake.
Copy generated files instead creating twice
Fix standalone link
Fix Fortran macro use and jni comment
...
* commit 'b53eb6fb29e556c482ce20fa7a21485c99beea74':
Add semicolons to more PASSED() invocations.
So that I can use PASSED(); anywhere a statement can go, #define PASSED() with a do-while wrapper.
* commit '38af6ee3d59a8e836f4c62dd533ddabd914c7abb':
Switch the 'get offset' operation from a dataset 'get' callback to a [native] dataset 'optional' operation.
* commit '803d805c74466a9d736455930b17de2d9f5cb02d':
Complete the comment on thread_main(), explaining why the barrier is used.
The first implementation seemed to allow for the possibility that a thread could block at the barrier, wake and exit the barrier, re-acquire the barrier lock and increase `nentered` before the other blocked threads woke and checked `nentered % count == 0`. Then the other blocked threads would check `nentered % count == 0` and, finding it false, go back to sleep in the barrier. This new implementation waits for a looser condition to obtain so that threads don't go back to sleep in the barrier.
Test the right condition for the EBUSY return in pthread_barrier_destroy().
s/exit_failure/EXIT_FAILURE/g
Implement pthread_barrier(3) for Darwin using a counter, condition variable, and mutex. Untested.
