Clean up a few warnings and use constant values for free-space
parameters for the metadata block size test.
Tested on:
Linux/64 2.6.18 (koala) w/production & szip
(h5committested also)
Add new "metadata block size" command line option ('-M <x>' or
'--metadata_block_size=<x>') for h5repack.
Tested on:
Mac OSX/64 10.7.3 (amazon) w/debug)
(h5committest upcoming)
Fix for HDFFV-7644 GMQS: h5diff - incorrect behaviors when comparing HDF5 files with different type of objects (dataset, group, type) as common objects
Description:
Fixed failure for comparing same named object with different object types in comparing groups. (common object comparison)
Prior to the fix, h5diff resulted in error. After the fix, h5diff detects such case as non-comparable and display messages accordingly.
Test cases were added and tagged with jira#.
Tested:
jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), Cmake (jam)
Description:
When copying an object with attribute creation order tracked, the attribute
creation order was not copied correctly to the destination file, causing an
error if the creation order was also indexed (due to attempting to insert
duplicate keys) or incorrect creation orders otherwise. Fixed to copy the
creation order correctly.
Also fixed the attribute character set not being copied, and fixed an issue
where an attribute opened with H5Aopen (or similar, but not by_idx), from an
object using the latest format but without creation order being tracked, would
always report the creation order as 0 (and marked as valid).
Tested: jam, koala, ostrich (h5committest), durandal
Bring "merge committed datatypes during H5Ocopy" feature from branch to
trunk. (Also has some minor bugfixes with it)
Tested on:
Mac OSX/64 10.7.3 (amazon) w/debug
(h5committest coming up)
HDFFV-944: Fortran test problem with HDF5 182, intel 11.0, open-mpi-1.2.8
Description:
Moved libtool post-processing 'ed' snippet that replaces wl=""
with wl="-Wl," when intel compilers are used to the end of the
configure script, after libtool is actually generated. (I imagine
that at some point in time during a libtool version upgrade the
libtool script ceased being generated immediately after the libtool
initialization macro and is generated at the end of configure with
all other files).
Additionally, added a leading 'g' to the replacement invocation to
change all instances of wl="" to wl="-Wl," instead of just the
first that it comes across. (There's a separate one for each
compiler used (C, Fortran, C++)).
Tested:
Reproduced the reported make failure and tested resolution on
NCSA's Forge with OpenMPI built with Intel 12.0.4.
Also, h5committested.
HDFFV-398: h5cc doesn't work with automake
Description:
Fixed compiler wrapper scripts to correctly detect compilation when
-MT preprocessor flag is provided, fixing a bug in which its *.o
argument was added to link_objs but not compile_args.
This previously broke usage of h5cc as the provided compiler in
configure scripts (like with h5edit) as automake may supply the -MT
option to the compiler via the makefiles.
Tested:
Tested using h5edit and h5committested.
update for HDFFV-7837 - h5diff: incorrect behavior with exclude-path option when unique object exist only in one file
Description:
Add the new test output list to test shell script.
This is based on the previous commit r22114.
Tested:
jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE)
Description:
Closed various HDF5 objects in DataSet::getInMemDataSize and
Attribute::getInMemDataSize to remove some memory leaks.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 2.6 (amani)
SunOS 5.10 (linew)
when it fails to allocate memory. I didn't add any test to the test suite since there is no good way to test it. But I tested and verified the error stack by hand.
Tested on jam, koala, ostrich.
Propagates the SEC2 driver fixes from HDF5 1.8.8 to the core VFD (mainly concerning the backing store). These fixes also conveniently fixed 7603 as well.
Tested on:
64-bit Windows 7
jam
koala
ostrich
