Commit Graph

3111 Commits

Author SHA1 Message Date
Allen Byrne
4616c1e863 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '1652a60fcbe9894d7c34a778fb24dce1979fb9a9':
  HDFFV-10605 Only test plugins if SHARED enabled
  Correct platforms
  Correct extlib depends
  Commit version changes for additional files for 1.11.3 snapshot release.
2018-11-06 16:01:35 -06:00
Allen Byrne
1652a60fcb Merge pull request #1319 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '81cb24ac1db0f4936b19067cdb7fa4e14e0d00db':
  Commit version changes for additional files for 1.11.3 snapshot release.
2018-11-06 16:01:16 -06:00
Allen Byrne
79903575e6 HDFFV-10605 Only test plugins if SHARED enabled 2018-11-06 15:45:58 -06:00
Larry Knox
81cb24ac1d Commit version changes for additional files for 1.11.3 snapshot release. 2018-11-06 10:56:36 -06:00
Allen Byrne
2c48f6bd00 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '7db3ea76da5d3b5c237a707b09d1618d3206ba83':
  Makes the installed header files the same between the autotools and CMake.
2018-10-29 11:10:27 -05:00
Dana Robinson
62b92ddf40 Makes the installed header files the same between the autotools
and CMake.

* CMake will no longer install private generated headers and tools
  library headers.
* Several empty public header files (which represent internal packages)
  were removed. These were only installed by CMake.
* Autotools installs will install H5FDwindows.h.

Fixes HDFFV-10614.
2018-10-26 20:44:29 -07:00
Allen Byrne
29afe82e79 TRILAB-81 fix typo 2018-10-24 15:39:09 -05:00
Allen Byrne
ee54368066 TRILAB-82 fixed errors found in review 2018-10-24 14:55:16 -05:00
Allen Byrne
9838dba4a4 TRILAB-81 Output error if filename length is greater then 255 2018-10-19 14:53:18 -05:00
Allen Byrne
cce1727525 TRILAB-81 check for func success before using value 2018-10-19 14:45:04 -05:00
Allen Byrne
6e84657314 TRILAB-81 Coverity fix 2018-10-19 14:03:51 -05:00
Allen Byrne
633b7f93ce TRILAB-81 coverity fixes 2018-10-17 10:57:56 -05:00
Dana Robinson
e962df1591 VOL FEATURE 2018-10-10 08:10:15 -07:00
Dana Robinson
8a4695ed59 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '2618dc314b9e4875e6ece7ee8696846ac2d02183':
  Remove extra unneeded
  Remove libsettings from pregenerated block
  CMake changes for SKIPPED and flush tests
  Correct $withval usage in configure
  HDFFV-10332 Adjust checks and generation of files
  HDFFV-10332 Use pre-generated files
2018-09-24 17:52:56 -05:00
Allen Byrne
8d7bdb7041 CMake changes for SKIPPED and flush tests 2018-09-24 14:38:46 -05:00
Dana Robinson
a56b4db4ae Remainder of vol_normalization changes (dataset, attribute, files, objects). 2018-09-24 12:23:41 -07:00
hdftest
e2f6e6f62f Snapshot version 1.11 release 2. 2018-09-20 14:54:10 -05:00
Dana Robinson
eb78fd8832 Develop normalization with vol_integration.
Mostly peripheral things like the tools and wrappers,
with just enough core library code to support that.
2018-09-18 22:57:37 -07:00
Dana Robinson
680cf4d946 Removed 'VOL' versions of FUNC_ENTER macros as well as empty functions
orginally intended to support the full SWMR feature.
2018-09-18 14:10:14 -07:00
Allen Byrne
05c5d40dd5 Cleanup and add intermediate dir for java 2018-08-31 13:29:36 -05:00
Allen Byrne
27af9a7922 HD prefix and whitespace 2018-08-28 10:54:54 -05:00
Allen Byrne
882e59d1b3 Merge pull request #1157 in HDFFV/hdf5 from ~JHENDERSON/hdf5:bugfix/CMake_MPI_libs_fix to develop
* commit 'd075c0854d1ffb5a8eae23c5eb9a4456067f30c9':
  Add quotes to places where MPI_C_LIBRARIES are linked against
2018-07-30 11:45:55 -05:00
Jordan Henderson
d075c0854d Add quotes to places where MPI_C_LIBRARIES are linked against 2018-07-27 14:58:01 -05:00
Allen Byrne
14c060bbeb Add missing test option 2018-07-24 14:15:32 -05:00
Allen Byrne
b14c8bdb1c Add test file with unwritten datasets 2018-07-24 12:00:07 -05:00
Larry Knox
3c66549210 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop 2018-07-18 17:06:59 -05:00
Larry Knox
892252106a Apply Cygwin pathches from Marco Atzeri.
Commit Joe Lee's typo corrections for src/H5MF.c.
2018-07-18 17:01:53 -05:00
Vailin Choi
92bf81a0fb Changes based on feedback from pull request. 2018-07-12 18:25:49 -05:00
Vailin Choi
d1f8ac3312 Modifications made based on feedback from pull request. 2018-07-11 16:02:51 -05:00
Vailin Choi
cf38292064 Fix for HDFFV-10333:
1) Check for valid object header version for a refcount messge
2) Check for invalid fill value size
3) Check for invalid dimension size in a layout message
4) Add --enable-error-stack option to h5stat
5) Add error checks to h5stat.c
6) Add tests to h5stat and h5dump
2018-07-10 22:00:14 -05:00
hdftest
b193bc11c9 Revert "Merge pull request #1116 in HDFFV/hdf5 from ~HDFTEST/hdf5_hft:hdf5_1_10 to develop"
This reverts commit e9f476dad4, reversing
changes made to 2ff00b1b93.
2018-06-24 18:04:23 -05:00
M. Scot Breitenfeld
f484649347 Merge branch 'develop' into hdf5_1_10.sync 2018-06-04 14:41:12 -05:00
Dana Robinson
dec2f588ac Merge pull request #1043 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop
* commit '1da9c5545c013ebc540ba3044810889d4acfa5be':
  Restored some unused #defines to the deprecated section of H5Dpublic.h.
  Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers.
  Updated commenting in the H5DO compat test.
  Stripped out most of the duplicated functionality in the H5DO compat test.
  * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines.
  * Fixed the error tests * Moved common functionality into helper functions
  Normalize with trunk prior to update merge
  Fixed a warning.
  Finished move of H5DOread/write_chunk calls to H5D.
  First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to   direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform   and renamed to direct_write_perf. * Updated autotools and CMake files.
2018-05-31 18:14:24 -05:00
Vailin Choi
be2fc7dcd1 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '2b0fb7e3f1f7da5b23d430702493ed4fb7f87166': (21 commits)
  HDFFV-9739 only executes H5E tests in production
  Remove link flag from compile command
  fix typo
  Add release note
  Correct attribute location
  HDFFV-9739 fix  copy testfiles command
  HDFFV-9739 remove obsolete test files
  HDFFV-9739 dup test file for concurrent tests
  HDFFV-9739 Fix autotools script
  HDFFV-9739 Change autotools test scripts
  Fix typo
  HDFFV-9739 Update test reference
  Update current windows test machines
  HDFFV-9739 Grab err number before API call
  HDFFV-9739 Add release note
  Adjust test names for concurrent tests
  Fix soversion
  HDFFV-9739 Fix copy name
  HDFFV-9739 factor out tests into separate JUnit
  Updated the threadsafety test to use error macros instead of asserts.
  ...
2018-05-23 14:27:05 -05:00
M. Scot Breitenfeld
4ddd7704b6 Merge branch 'develop' into hdf5_1_10.sync 2018-05-22 11:48:44 -05:00
Dana Robinson
0e584c7af2 Merge branch 'develop' into h5do_direct_chunk_hl_to_src 2018-05-14 17:45:23 -07:00
Vailin Choi
b178d80be0 Changes made based on feedback from pull request #1039. 2018-05-14 12:26:48 -05:00
Vailin Choi
ea66ac1e67 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'dcc66a4f157ace0858b788228550f3e104df3242': (35 commits)
  GGC requires attribute before function
  Correct COMPILE defs usage
  Add missing module_dir property
  Text cleanup
  Correct sentence punctuation.
  Add release note.
  Use set_property for MT flag
  Correct command usage
  Remove APPEND
  Fix typo
  Add missing test lib
  add missing folder to path
  Fix another command revert
  Missed a command revert
  Revert to old style for LINK_FLAGS gen expr not working
  LINK_FLAGS must be separate property sets
  Fix link flags syntax
  Revert refactor link flags
  refactor link flags to interface
  Refactor link flags
  ...
2018-05-14 11:20:03 -05:00
M. Scot Breitenfeld
88e0c3e748 Merge branch 'develop' into hdf5_1_10.sync 2018-05-10 09:06:35 -05:00
Allen Byrne
37c27afde0 Fix MPI on Windows by adding MPI include folder 2018-05-09 14:29:44 -05:00
M. Scot Breitenfeld
b69bd0771e Merge branch 'develop' into hdf5_1_10.sync 2018-05-08 17:17:45 -05:00
Allen Byrne
0344785872 Text cleanup 2018-05-08 15:51:39 -05:00
Dana Robinson
64e13ca220 Merge branch 'develop' into h5do_direct_chunk_hl_to_src 2018-04-30 15:22:09 -07:00
Allen Byrne
fde2d1fe4a Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '1f8cb03e11a46f853881f45dac18eff2dd68401e':
  Fix errors in Makefile.am files that cause "make check" to repeat test, even when there are no changes to source files.  (Also add a ggenerated script to the list of files cleaned up on 'make distclean')
  Further minor cleanups
  Checkpoint normalization against incoming hyperslab / selection / dataspace improvements.
2018-04-30 11:05:26 -05:00
Dana Robinson
09b1106e39 First stage of moving H5DOread/write_chunk() to src/ and making
them H5D calls.
* Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*.
* Moved the hl/test/test_dset_opt test to test/ and renamed to
  direct_chunk.
* Moved the hl/test/dectris_hl_perf test to tools/test/perform
  and renamed to direct_write_perf.
* Updated autotools and CMake files.
2018-04-30 07:52:07 -07:00
Quincey Koziol
83e2ea681d Fix errors in Makefile.am files that cause "make check" to repeat test, even
when there are no changes to source files.  (Also add a ggenerated script
to the list of files cleaned up on 'make distclean')
2018-04-28 21:38:49 -05:00
Allen Byrne
2347bffaa2 TRILABS-19 remove add_defintions and use generator expressions 2018-04-26 16:41:04 -05:00
Vailin Choi
e6bc326ec0 Fix for HDFFV-10180 Performance issues with H5Oget_info. 2018-04-24 15:10:13 -05:00
Allen Byrne
6c82c49dd5 TRILABS-20 set a compiler name on all project commands 2018-04-20 10:11:55 -05:00
Allen Byrne
46f2a2a432 TRILABS-19 Initial conversion of include_directories to targets 2018-04-17 15:57:58 -05:00