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Author SHA1 Message Date
Jordan Henderson
ce0f87fb35 Add H5Ssel_iter_init API call to reset a selection iterator 2020-09-18 00:12:37 -05:00
David Young
cd1d772f35 Test the format string "ll" before "l", "L", and "q", like the 
./configure script does.  This ought to fix the compilation failure
in test/dt_arith.c that Allen told me about:

/home/buildbot/bb-workers/centos8-vm01/hdf5trunk-StdShar-code-centos8/build/hdfsrc/test/dt_arith.c: In function ‘test_conv_int_1’:
/home/buildbot/bb-workers/centos8-vm01/hdf5trunk-StdShar-code-centos8/build/hdfsrc/test/dt_arith.c:2500:34: error: format ‘%ld’ expects argument of type ‘long  int’, but argument 3 has type ‘long long int’ [-Werror=format=]
                 HDfprintf(stdout," %29"H5_PRINTF_LL_WIDTH"d\n", *((long long*)aligned));
 2020-09-17 16:00:27 -05:00
Allen Byrne
01482d93d4 Disable formatting for file 2020-09-05 18:21:58 -05:00
Allen Byrne
d8d17d2328 File changes to affect formatting 2020-09-04 16:51:30 -05:00
Larry Knox
9eaeac2e1b Merge pull request #2874 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '6b71d6dc9453e8f94ac82732496ee59ca6495587':
  Add zllib and szip pages
  Correct COPYING path
 2020-09-04 16:49:36 -05:00
Allen Byrne
30c7264c2c CMake and script changes for clang-format 2020-09-04 16:36:52 -05:00
Allen Byrne
6b71d6dc94 Add zllib and szip pages 2020-09-04 15:44:33 -05:00
Allen Byrne
91213082b5 Correct COPYING path 2020-09-04 08:07:30 -05:00
David Young
f796cd3c78 Cast a non-void pointer to void pointer for "%p". 2020-09-03 16:44:31 -05:00
David Young
d85cd245d2 Merge remote-tracking branch 'hdffv/develop' into rebased-fprintf-experiment 2020-09-03 16:13:47 -05:00
Quincey Koziol
b3a89155b9 Merge pull request #2866 in HDFFV/hdf5 from fix_nil_collective_metadata_write to develop 
* commit '45021f1826f3710a3008430ddf7216bffb7068f7':
  Update buffer count
  Revert PR 405 (https://bitbucket.hdfgroup.org/projects/HDFFV/repos/hdf5/pull-requests/405/overview) and reimplement with correct and simpler code.
  Revert "    Checkin of fix for CGNS bug"
  Revert "Removed commeted out code from H5C_dump_coll_write_list()"
 2020-09-02 17:02:57 -05:00
Quincey Koziol
0f60e7e576 Merge pull request #2843 in HDFFV/hdf5 from vol_dataset_io_dxpl_fix to develop 
* commit '4b69577e10ed58bf6536599092390f02a49ff3f9':
  Bug fix to allow pass-through VOL connectors to set DXPL properties (like requesting collective operations) on dataset I/O
 2020-09-02 08:14:54 -05:00
Quincey Koziol
45021f1826 Update buffer count 2020-08-28 18:03:08 -05:00
Quincey Koziol
500cbbb71c Merge remote-tracking branch 'origin/develop' into fix_nil_collective_metadata_write 2020-08-28 11:17:04 -05:00
Quincey Koziol
165c454aa7 Revert PR 405 (https://bitbucket.hdfgroup.org/projects/HDFFV/repos/hdf5/pull-requests/405/overview) 
and reimplement with correct and simpler code.
 2020-08-27 18:18:44 -05:00
Quincey Koziol
72b9b8ca75 Revert " Checkin of fix for CGNS bug" 
This reverts commit 94c34773ce.
 2020-08-27 18:11:19 -05:00
Quincey Koziol
c9f15824fe Revert "Removed commeted out code from H5C_dump_coll_write_list()" 
This reverts commit eb75dc1bb0.
 2020-08-27 18:01:11 -05:00
Dana Robinson
3a2fd09941 Merge pull request #2863 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop 
* commit '49e01e594eb2d0c25455e7ff71eed3de074fd15b':
  Adds RELEASE.txt note about HDFS VFD stubs being removed
  Removes inappropriate file locking call
  Trivial whitespace change to H5Pencdec.c
  Minor refactoring based on 1.10 normalization work
  Trivialities noticed while normalizing 1.10
 2020-08-27 14:42:23 -05:00
Dana Robinson
49e01e594e Adds RELEASE.txt note about HDFS VFD stubs being removed 2020-08-27 10:54:14 -07:00
Dana Robinson
3d7a0dc6d5 Merge branch 'develop' into develop_minor 2020-08-27 10:36:03 -07:00
Allen Byrne
a38a286be1 Merge pull request #2849 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '0932c46e3d5b09d32cbe29335e8054302ab122c5':
  MinGW uses "MinGW Makefiles"
  The version string has a second use for packaging
 2020-08-26 14:23:07 -05:00
Allen Byrne
0932c46e3d MinGW uses "MinGW Makefiles" 2020-08-26 10:17:21 -05:00
Allen Byrne
3f65adefd9 The version string has a second use for packaging 2020-08-26 09:03:43 -05:00
Quincey Koziol
4b69577e10 Bug fix to allow pass-through VOL connectors to set DXPL properties (like requesting collective operations) on dataset I/O 2020-08-25 18:20:27 -05:00
Allen Byrne
b4f4bd1d4c Merge pull request #2839 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '336b30024216b142eb096bf85986786ecf65e993':
  Add back function for VERIFY_EXTERNAL_CONSOLIDATION
 2020-08-25 11:40:31 -05:00
Allen Byrne
336b300242 Add back function for VERIFY_EXTERNAL_CONSOLIDATION 2020-08-25 11:19:12 -05:00
Allen Byrne
e672014f29 Merge pull request #2826 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'ec1c324a0d184d2778e9155140367a7d3a307fa1':
  Revert H5_VERS_SUBRELEASE check
  Add special case when H5_VERS_SUBRELEASE is 0
  Condition if (H5_VERS_SUBRELEASE) is incorrectly false when H5_VERS_SUBRELEASE is 0, a valid value for H5_VERS_SUBRELEASE. Updated to if (${H5_VERS_SUBRELEASE} STREQUAL "") with corresponding reversal of action statements to avoid NOT.
  Add hypen to subrelease regex
  Fix S3/HDFS test
 2020-08-24 08:07:50 -05:00
Allen Byrne
ec1c324a0d Revert H5_VERS_SUBRELEASE check 2020-08-24 08:01:01 -05:00
Allen Byrne
9765b7ff30 Add special case when H5_VERS_SUBRELEASE is 0 2020-08-24 06:55:00 -05:00
Larry Knox
9b63dcb5c8 Condition if (H5_VERS_SUBRELEASE) is incorrectly false when 
H5_VERS_SUBRELEASE is 0, a valid value for H5_VERS_SUBRELEASE.
Updated to if (${H5_VERS_SUBRELEASE} STREQUAL "") with corresponding
reversal of action statements to avoid NOT.
 2020-08-24 00:32:48 -05:00
Allen Byrne
4d5354afcd Add hypen to subrelease regex 2020-08-23 14:58:09 -05:00
Allen Byrne
2ac49e2fec Fix S3/HDFS test 2020-08-23 14:05:19 -05:00
Quincey Koziol
a9ffedfd61 Merge pull request #2819 in HDFFV/hdf5 from coll_chunk_fill_fix to develop 
* commit '4c43ff0b8b015ccfc1f4aeab18f189d629a5beb9':
  Simplify default use of MPI_BYTE
  Don't free builtin MPI_BYTE MPI type
  Simplify code to avoid using a boolean to free MPI types
  Avoid creating MPI datatypes on ranks with 0 chunks to write'
 2020-08-21 16:17:10 -05:00
Quincey Koziol
4c43ff0b8b Simplify default use of MPI_BYTE 2020-08-20 18:24:07 -05:00
Quincey Koziol
fa0d395370 Don't free builtin MPI_BYTE MPI type 2020-08-20 18:22:39 -05:00
Quincey Koziol
d67de87ecd Simplify code to avoid using a boolean to free MPI types 2020-08-20 17:08:24 -05:00
Quincey Koziol
91bd6f9a63 Avoid creating MPI datatypes on ranks with 0 chunks to write' 2020-08-20 14:31:35 -05:00
Larry Knox
6d73a778c6 Merge pull request #2816 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit '76d93a78fe583b99efa295cd44359092310172a3':
  Revert "Merge pull request #2796 in HDFFV/hdf5 from small_chunk_io_opt to develop"
 2020-08-20 11:05:41 -05:00
Larry Knox
76d93a78fe Revert "Merge pull request #2796 in HDFFV/hdf5 from small_chunk_io_opt to develop" 
This reverts commit a7a8e6451a, reversing
changes made to 30422a6b55.
 2020-08-20 10:57:29 -05:00
Quincey Koziol
a7a8e6451a Merge pull request #2796 in HDFFV/hdf5 from small_chunk_io_opt to develop 
* commit 'ad9a2ceabe2dd9045111f8b57774948a124607b9':
  Only initialize the contiguous or compact I/O info struct when needed.
 2020-08-19 16:56:20 -05:00
Larry Knox
30422a6b55 Merge pull request #2806 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit '98754591b8dcf2be70957d67ec7172c53cbaa827':
  Revert "Merge pull request #2477 in HDFFV/hdf5 from pio_update to develop"
 2020-08-18 13:31:46 -05:00
Larry Knox
98754591b8 Revert "Merge pull request #2477 in HDFFV/hdf5 from pio_update to develop" 
This reverts commit ba80bcaff2, reversing
changes made to 522ef0dd5c.
 2020-08-18 12:51:13 -05:00
Larry Knox
18012b1d98 Merge pull request #2801 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:swmr_test_fail_cmake to develop 
* commit '857e0f4404cb5a754d799110b89f0f16b503b4ce':
  Fixes CMake issue with file locking variable
 2020-08-18 08:20:41 -05:00
Dana Robinson
857e0f4404 Fixes CMake issue with file locking variable 2020-08-18 06:18:23 -07:00
Larry Knox
3f5382bb62 Merge pull request #2795 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr2020:hdf5_bmr2020_addrsani to develop 
* commit '5352b1dbc92313d91d3502dd8352352abe8749a7':
  Fixed typo
  Fix HDFFV-11101
 2020-08-18 08:03:29 -05:00
Larry Knox
ba80bcaff2 Merge pull request #2477 in HDFFV/hdf5 from pio_update to develop 
* commit 'a20bf599b682bfa0a91d571a922973e0c53b524a':
  Don't track file offset position when using pread / pwrite.
 2020-08-18 08:02:55 -05:00
Larry Knox
522ef0dd5c Merge pull request #2734 in HDFFV/hdf5 from ~DYOUNG/werror:cse to develop 
* commit 'fa7f8ad2f3fe509ff69dc574ddad0ae4d329ccca':
  Improve code readability: extract common subexpressions into temporary variables.
 2020-08-18 08:01:27 -05:00
Larry Knox
057cd67021 Merge pull request #2735 in HDFFV/hdf5 from ~DYOUNG/werror:virtual-write-one to develop 
* commit '7b48e3409a8c3ba1e83c929656e84196a6dc2e6d':
  Fix a bug in H5D__virtual_write_one to stop an assertion from failing deep in H5Dwrite---project the *clipped* virtual selection instead of the virtual selection:
 2020-08-18 08:00:54 -05:00
Dana Robinson
f4d03432a4 Removes inappropriate file locking call 2020-08-18 05:53:33 -07:00
Binh-Minh Ribler
5352b1dbc9 Fixed typo 2020-08-17 22:37:26 -05:00