Commit Graph

440 Commits

Author SHA1 Message Date
Albert Cheng
836cb7f7ba [svn-r11638] Purpose:
Bug fix.

Description:
PGI v6.0-5 pgf90 compiler has a bug in Mstandard that caused compiling
of legal logical value to fail.
We also have second thought of imposing -Mstandard and -Mdclchk on users
since these flags are included in h5fc.

Solution:
Removed -Mstandard until we can fix the v6.0-5 compiler error
and moved -Mdclchk to DEBUG_FFLAGS so that it is used during development
mode but not imposed on users for production release.

Platforms tested:
heping: production and development mode using v6.0-4 compiler.
mir: production and development mode using v6.0-4 compiler.
2005-10-31 13:24:32 -05:00
Frank Baker
25733372e4 [svn-r11614]
Description:
    Correct typo in copyright notice.
Platforms tested:
    Ran hdf5/bin/chkcopyright without errors.
2005-10-28 15:28:20 -05:00
James Laird
91cbcdf42f [svn-r11612] Purpose:
Bug fix

Description:
Failed parallel tests now cause make to exit with an error.

Solution:
Edited config/conclude.am to throw an error if parallel test programs fail.

Platforms tested:
heping, modi4
2005-10-27 17:30:46 -05:00
Albert Cheng
9171536823 [svn-r11610] Purpose:
Bug fix.

Description:
The previous way of detecting the MPICH version fails if the suspected
$CC does not give the expected MPICH version information.  Though no
consequence, it generates error messages that alarm users.
Also, mpich2 gives the version information as if it were mpich v1.0.2
which was incorrectly included as an earlier version of the origianl
mpich.

Solution:
Implemented a more robust code to detect the version and narrow the
recognition down to v1.2.0-v1.2.5.  Also, the code were duplicated in
two files (linux-gnulibc1 and ia64-linux-gnu).  Combined them into a
new file called mpich.

Platforms tested:
Tested in heping using mpicc and mpich2/mpicc and also in tg-ncsa.

Misc. update:
Updated MANIFEST.
2005-10-26 15:44:19 -05:00
Frank Baker
155d762b9c [svn-r11592]
Description:
    Add source code copyright notice; comment symbols vary by type of file.
Platforms tested:
    No changes that should cause any problems.  Nonetheless, the tree will
    be checked out fresh and tests run immediately post-commit.
2005-10-21 09:54:41 -05:00
James Laird
ea5d1f4325 [svn-r11514] Purpose:
Bug fix

Description:
Fixed config file for apple powerpcs.  Should detect xlf more
often (though not infallibly).
Should disable shared libraries when xlf is being used.

Solution:
Since neither xlf nor f95 have "version" options (which could
be used to identify which compiler is being used), the config
file checks if the fortran compiler is named 'xlf' (or /path/xlf).
If not, it assumes the compiler must be f95.
xlf is still the default if no compiler is named at all.

Platforms tested:
pommier (change only to mac-specific config file)
2005-10-07 12:56:38 -05:00
HDF Admin
c13178a42d [svn-r11489] Snapshot version 1.7 release 51 2005-10-02 04:07:35 -05:00
Albert Cheng
55c4f63df7 [svn-r11478] Purpose:
bug fix.

Description:
When a parallel test script test fails, make would continue because the
way it was setup inside a for loop.  Fixed it by issuing an exit 1 inside
the loop.

There was also a typo error in the newer command comparision that it
must be $${chkname} in order to be valid.  Also, the test script itself
was not checked in the newer lists.  All fixed.

Platforms tested:
h5committested and also hand tested in heping pp mode.
2005-09-29 00:17:06 -05:00
James Laird
c8c43d2b9a [svn-r11461] Purpose:
Code cleanup

Description:
Removed Fortran type sizes from config/* files.

Solution:
These lines weren't doing anything anymore; they've been replaced by automatic
type generation.  This is just housekeeping to remove them from
the config/* files.

Platforms tested:
mir, sol, modi4
2005-09-22 18:02:40 -05:00
James Laird
14acfddff2 [svn-r11460] Purpose:
Documentation update

Description:
Updated config/Makefile.am.blank now that I know better.
2005-09-22 14:30:23 -05:00
James Laird
3267458b64 [svn-r11446] Purpose:
Bug fix

Description:
Massaged the newer script and config/conclude.am to make SX6 happy.


Platforms tested:
SX6, sol, mir
2005-09-20 16:46:24 -05:00
Albert Cheng
c0e83899c3 [svn-r11431] Purpose:
New feature.

Description:
Added the time command to the make check target to report time usage
of the execute of each test and test scripts.  This gives us some idea
how long each test takes and some vague idea it is compute bound or
not.

powerpc-ibm-aix5.x:
Change $RUNPARALLEL default setting to allow it being invoked by the
time command.

Platforms tested:
h5committested.
2005-09-17 22:04:28 -05:00
James Laird
ae2a313b5b [svn-r11421] Purpose:
Feature

Description:
Added H5_CFLAGS, etc. to 1.7 branch.
Now compilation flags can be put in H5_*FLAGS and they'll be used when
building hdf5 but not in h5cc.


Platforms tested:
mir, sleipnir, modi4

Misc. update:
2005-09-16 16:26:17 -05:00
Raymond Lu
f7c075c736 [svn-r11414] Purpose: Rename a API function
Description:  The API function H5Tis_hard() which was recently checked
in has been renamed to H5Tcompiler_conv() to be more descriptive.  No
other changes.


Platforms tested: fuss - simple change.

Misc. update: config/lt_vers.am to update libtool version.
2005-09-14 14:10:37 -05:00
Leon Arber
1b6406124a [svn-r11405] Purpose:
Bug fix

Description:
A whole chunk of this file somehow got deleted and the heavily reduced
file was accidentally checked in.  This is the complete version of the file, with the
mpiicc fix.

Solution:

Platforms tested:

Misc. update:
2005-09-12 23:14:23 -05:00
Elena Pourmal
8f9e9e2c45 [svn-r11400] Purpose: Maintenance
Description: Added -K c99 flag to sxc++ flags to ienforce C99 standard;
             added cache values for getrusage and gethostname

Solution:

Platforms tested: SX-6

Misc. update:
2005-09-12 22:13:51 -05:00
Leon Arber
a9f72e29fd [svn-r11397] Purpose:
Bug fix

Description:
Forgot to remove a debug statement before committing.

Solution:
The script printined out what it thought CC_BASENAME was for debugging.
Removed this print statement.

Platforms tested:
minor change, mcr

Misc. update:
2005-09-12 21:15:58 -05:00
Leon Arber
c78c580f5c [svn-r11394] Purpose:
Bug fix

Description:
Same bug as was just checked in for v16.  Do the complicated
derived datatype check for compilers named mpiicc in addition to
mpicc.

Solution:

Platforms tested:

Misc. update:
2005-09-12 13:53:26 -05:00
Elena Pourmal
8acac62da8 [svn-r11360] Purpose: SX-6 port
Description: SX-6 doesn't need to use ranlib.

Solution: Set RANLIB variable to ":" (suggested by James)

Platforms tested: SX-6

Misc. update:
2005-09-07 12:28:31 -05:00
Elena Pourmal
436b9db1fa [svn-r11357] Purpose: SX-6 port
Description: Brought back changes from SX-6.

Solution:

Platforms tested: SX-6 NEC America

Misc. update:
2005-09-06 16:35:37 -05:00
Albert Cheng
6d3715e537 [svn-r11323] Purpose:
tidy up.

Description:
MPE option created *.clog file whenever it is executed in MPI.
The cleanup of *.clog files were done in individual Makefile.in.
Often, it is forgotten.

Solution:
Moved the cleaning of *.clog files to CHECK_CLEANFILES in commence.am
so that it is applied whenever check-clean is called.

Platforms tested:
heping pp using MPE.
2005-08-31 15:03:52 -05:00
James Laird
66af6dce17 [svn-r11319] Purpose:
Bug fixes

Description:
This checkin fixes an occasional error on kelgia on sol during distclean.
It also causes test scripts to depend properly on the programs they're
supposed to be testing.

Solution:
The kelgia bug was due to some files being cleaned by automake and manually.
Removed the manual cleaning in src/Makefile.am.
Test script dependencies now need to be specified manually, since the
makefile can't guess what they test from their name.  Currently all test
scripts in a given directory have a single list of dependencies--this was
easy and seems to be sufficient.
These dependencies are listed in the SCRIPT_DEPEND variable in the Makefile.am.

Platforms tested:
heping, mir, modi4, sol

Misc. update:
2005-08-30 18:42:39 -05:00
Raymond Lu
bd4312d049 [svn-r11311] Purpose: New features.
Description:  Added 2 new configure options, --enable-exception and --enable-accuracy.

--enable-exception lets the library check whether user's exception handling
functions are present during compiler data conversions and use them if they are.
When it's disabled, this step is skipped to improve conversion speed.  This
step isn't implemented yet for soft conversions because there would be little
gain in speed.

--enable-accuracy guarantees data accuracy during data conversions.  It means
the library will choose compiler conversions only if the accurate data is
secured.  Otherwise, the library will go for the library's own conversions.  If
this option is disabled, the library uses compiler conversions in favor of
their speed as long as they work even if data can be incorrect.


Platforms tested: h5committest and fuss.  Some systems may fail after this
checkin.
2005-08-29 10:21:58 -05:00
Albert Cheng
538d37a1bc [svn-r11303] Purpose:
minor tidy up.

Description:
Changed both test programs and test scripts to use the same suffixes
(.chkexe and .chklog).  Changed from .log to .chklog to avoid running
into potential conflicts by other "things" (e.g., config.log).

Tested:
Heping.
2005-08-26 17:24:27 -05:00
Albert Cheng
e5022d40a8 [svn-r11257] Purpose:
Update & feature

Added a new cached data conversion setting.

Added -DH5_FLOPS to CPPFLAGS for compiling.  Had used the builtin
__PUMAGON__ but H5_TFLOPS is more meaningful.

Platforms tested:
Tested in Flops.

Misc. update:
2005-08-17 13:35:29 -05:00
Albert Cheng
1b760b2fd5 [svn-r11212] Purpose:
Bug fix and improvement.

Description:
The test output were not displayed for parallel tests.
The serial tests output were always displayed whether the test was
actually ran this time or not.

Solution:
Moved the display of test output inside the target where the actual
tests are run.

Platforms tested:
Tested in heping using pp and fortran.
2005-08-08 12:24:06 -05:00
Albert Cheng
a0f06d0961 [svn-r11207] Purpose:
Bug fix and code minor cleanup.

Description:
The attempt to redirect stderr together to the log files were
done in the wrong order such that stderr output goes to where
stdout WAS.  Fixed that.

Code minor cleanup--use shell variables to hold the name of the
log file and the test instead of generating them repeatedly.  This
makes easier code reading, less crowded and avoid typos.

Only conclude.in is changed.  The Makefile.in changes are all
derived from automake.

Platforms tested:
h5committested.

Misc. update:
2005-08-08 02:30:46 -05:00
HDF Admin
e49bb1feea [svn-r11204] Snapshot version 1.7 release 50 2005-08-07 03:45:28 -05:00
Albert Cheng
181f251055 [svn-r11192] Purpose:
Port to Red Storm

Description:
Initial version to configure for SNL Red Storm.  To configure for it, do
   ./configure --host=x86_64-redstorm-linux

Platforms tested:
Tested in Red-storm.  Many things are still failing but this will
make the configure part easier.

Misc. update:
2005-08-03 15:27:42 -05:00
James Laird
e75a185eca [svn-r11185] Purpose:
Makefile feature

Description:
'make check-clean' now cleans *.h5 files created by tests as well as
.log and .chkexe files.

Solution:
check-clean is now a separate target in its own right, which cleans less
than mostlyclean (check-clean < mostlyclean < clean < distclean).

Platforms tested:
mir, heping, modi4 (serial and parallel)
2005-08-02 12:59:03 -05:00
James Laird
c63ef2cba2 [svn-r11179] Purpose:
Feature: check-clean target

Description:
'make check-clean' cleans up output files from tests.

Solution:
Tests create foo.chkexe and foo.log files.  Scripts create foo.chksh and
foo.logsh files.  'make check-clean' will clean these files up so that
the tests can be re-run.
Also suppressed some not-very-useful output of Makefiles when it would
echo commands.

Platforms tested:
mir, sleipnir, modi4

Misc. update:
2005-08-01 17:22:55 -05:00
HDF Admin
3cba75f060 [svn-r11148] Snapshot version 1.7 release 49 2005-07-24 02:58:43 -05:00
Quincey Koziol
34bd25f361 [svn-r11144] Purpose:
New port

Description:
    Elena asked me to check in her NEC SX-6 work, so here it is! :-)

Platforms tested:
    FreeBSD 4.11 (sleipnir)
    NEC SX-6 (by Elena)
2005-07-22 20:55:12 -05:00
James Laird
7236935a9d [svn-r11095] Purpose:
Configuration feature

Description:
Serial test output is now stored in log files and printed when all tests
in a directory complete, or when a test fails.  This should make test output
more readable and useful.
Also made changes to clean up ii_files directories that are created by some
C++ compilers/linkers.
Also fixed a few minor Makefile bugs.

Solution:
When serial tests run, their output is saved in *.log or *.logsh.  While
running, tests only print when they begin and when they complete; their
more specific output (from the log file) is printed if the test fails or
when all tests have completed.
Comments welcome.

Platforms tested:
mir, modi4 (parallel and serial), copper, shanti
2005-07-21 14:28:11 -05:00
James Laird
e9471222f1 [svn-r11085] Purpose:
Bug fix

Description:
Update Makefiles now that docs are no longer in main hdf5 tree.

Solution:
Changed root-level Makefile.am not to recurse into docs tree.
Removed docs Makefiles from configure.in.
Removed config/commence-doc.am, since it is no longer used.

Platforms tested:
mir (change to Makefiles only)
2005-07-19 12:58:24 -05:00
James Laird
d2e92fd236 [svn-r11083] Purpose:
Bug fixes

Description:
A number of minor changes to Makefiles.  Some files will now be cleaned
properly, some comments are more informative, etc.


Platforms tested:
heping, mir, modi4
2005-07-18 18:30:38 -05:00
HDF Admin
5de418b2b4 [svn-r11081] Snapshot version 1.7 release 48 2005-07-18 16:20:23 -05:00
MuQun Yang
0f1c1ae4b3 [svn-r11066] Purpose:
Updating phase 2 work of collective IO


Description:
When the size is bigger than some value for MPI derived data type, mpich 1.2.5 and lower
version won't work any more, so in the configuration file, we will check the version number
and switch from collective IO to independent IO by turning off complex derived datatype.

Solution:


Platforms tested:
linux 2.4, AIX 5.1, Linux 2.4 IA64 and IRIX 6.5


Misc. update:
2005-07-12 14:16:39 -05:00
MuQun Yang
bee5c236e5 [svn-r11065] Purpose:
Updating phase 2 work of collective IO

Description:
When the size is bigger than some value for MPI derived data type, mpich 1.2.5 and lower
version won't work any more, so in the configuration file, we will check the version number
and switch from collective IO to independent IO by turning off complex derived datatype.

Solution:

Platforms tested:
linux 2.4, AIX 5.1, Linux 2.4 IA64 and IRIX 6.5

Misc. update:
2005-07-12 14:14:18 -05:00
Albert Cheng
25c0edc3b1 [svn-r11052] Purpose:
improvement.

Description:
make the adding of -xopnemp=stabs linking flag only when enable-fortran
is set.

Platforms tested:
Tested in shanti only.
2005-07-07 23:55:17 -05:00
Elena Pourmal
078a6a45ba [svn-r11051] Purpose: Maintenance
Description: -xopnemp=stabs linking flag is needed on Solaris 2.9
             in order to build Fortran library.

Solution: Added the flag to LDFLAGS if system version is 5.9
          I don't really like the fix since this flag is now always added
          for 5.9 systems even if Fortran is not enabled. If someone has
          a better solution, please let me know :-)


Platforms tested: shanti, sol

Misc. update:
2005-07-07 21:11:33 -05:00
Elena Pourmal
81bf322285 [svn-r11046] Purpose: Maintenance
Description: Removed -DH5_ABSOFT flag for C compiler when Absoft f95 compiler
             was used; this flag is not needed anymore since we automatically construct
             names of C functions called from Fortran.

Solution:

Platforms tested: pommier

Misc. update:
2005-07-07 16:05:52 -05:00
Quincey Koziol
9b597516c0 [svn-r11042] Purpose:
Bug fix

Description:
    The ".chksh" file for a test script was being created in the "source"
location rather than the build location.  This can cause problems when
multiple builds are running because "slower" machines will see the ".cshsh"
file from faster machines and will not run the test script as they should.

Solution:
    Use 'basename' command to strip off the path of the script and create
the ".chksh" file in the build location.

Platforms tested:
    FreeBSD 4.11 (sleipnir)
    h5committest
2005-07-07 15:46:49 -05:00
Albert Cheng
f68a2e6db7 [svn-r11034] Purpose:
bug fix.

Description:
-nt is not a universal option for the test command in all platforms.
The use of it in conclude.am cause some platforms to bark at the
Makefile generated.

Solution:
Created a command script bin/newer which tests if file1 is newer
than file2.  Replace the "test file1 -nt file2" by
"newer file1 file2".

Platforms tested:
Tested in sol.
2005-07-06 23:52:45 -05:00
James Laird
4cf99e9f28 [svn-r11013] Purpose:
Bug fix

Description:
Fixed bugs that caused tests to be unable to find testhdf5.sh during
daily tests, and another that broke sol and shanti.

Solution:
When tests are run, their path is ./$testname .
When scripts are run, their path has no leading "./".  Fixed.
Sol and shanti don't recognize the -e option for test, but they do know
-f.  Fixed.
Also modified release notes.

Platforms tested:
mir, shanti, heping
2005-07-01 16:22:05 -05:00
James Laird
43f091f462 [svn-r11008] Purpose:
Feature: tests now use parallel make and only run once

Description:
When make is invoked in parallel (using the -j option), several tests will
now be run simultaneously.  This should speed up testing on a number of
systems.
When a test passes, it creates a foo.chkexe or foo.chksh file, which prevents
the test from running again unless the test or library changes.

Solution:
Most of the changes live in config/conclude.am.  Added *.chkexe and *.chksh
files to the list of files to be cleaned at "make mostlyclean" time.
Parallel tests still run one at a time, but use the same make instructions
as serial tests.

Platforms tested:
mir, eirene, sleipnir, pommier, copper, modi4 (some errors occurred, probably
due to the test being run before updating hdf5.  Will re-run tests after
checkin.)
2005-06-30 18:35:32 -05:00
MuQun Yang
40b72a28ac [svn-r10880] Purpose:
Adding supports for cygwin

Description:
g95 needs special fortran flags to make it work cygwin.

Solution:
Add the flag on cygwin config file.
Now gcc, g++ and g95 are supported on cygwin.

Platforms tested:
cygwinNT_5.1, Linux 2.4
Misc. update:
2005-06-08 14:54:15 -05:00
Albert Cheng
65107926e1 [svn-r10858] Purpose:
bug fix.

Description:
The check-s and check-p targets are not recursively passes down.
Make them so.

Platforms tested:
heping (serial and pp).
2005-06-04 00:01:12 -05:00
Albert Cheng
a2217d58c8 [svn-r10849] Purpose:
bug fix

Description:
check-s and check-p were set as pre-requistics of test.  They
would get executed in parallel if parallel make is used.  This
could cause problems since serial tests are used to be executed
before parallel tests. It is not known if it is always okay to
run serial and parallel tests in simultantously.

Solution:
Change check-s and check-p as actions of the target test so
that they get executed sequnentially.

Platforms tested:
heping PP.
2005-06-02 18:42:48 -05:00
James Laird
2423bd6cab [svn-r10840] Purpose:
Added check-s and check-p targets.

Description:
Added check-s and check-p targets to 1.7 branch to match changes to 1.6
branch.  Now parallel and serial tests can be run separately.

Platforms tested:
mir, modi4, copper
2005-06-01 20:51:52 -05:00
Albert Cheng
aa048ea6ff [svn-r10839] Purpose:
improvement.

Description:
hdf5_mpi_complex_derived_datatype_works is hardset to no but
newer IRIX64 systems have it working.  Changed the code to
detect the compiler version and set hdf5_mpi_complex_derived_datatype_works
to no for older compilers only.

Platforms tested:
modi4 for the no effect.

Misc. update:
2005-06-01 18:20:22 -05:00
Elena Pourmal
acb664910b [svn-r10804] Purpose: Maintenance
Description: Altix configuration file used icc for the default C++ compiler.
             Since cobalt moved to Intel 8.1, C++ compilation failed.

Solution: Changed icc to icpc for the default C++ compiler on Altix.

Platforms tested: cobalt

Misc. update:
2005-05-26 10:29:45 -05:00
Quincey Koziol
7a9cd4ac49 [svn-r10787] Purpose:
Bug fix

Description:
    Accommodate the GNU C++ compiler.

Platforms tested:
    FreeBSD 4.11 (sleipnir) w/CC=g++
    Not tested by h5committest
2005-05-23 15:39:54 -05:00
HDF Admin
a4345b9917 [svn-r10744] Snapshot version 1.7 release 47 2005-05-15 04:34:14 -05:00
Quincey Koziol
bbe03d7361 [svn-r10736] Purpose:
Code cleanup

Description:
    Clean up some compiler warnings

Platforms tested:
    FreeBSD 4.11 (sleipnir)
    h5committest
2005-05-07 14:37:48 -05:00
James Laird
8570c314ef [svn-r10729] Purpose:
Cray X1 Port

Description:
Porting 1.7 branch to Cray X1.  With these changes, HDF5 builds, but
there are some errors in the tests.  Working on the errors.

Solution:
Added nv1-cray file to config directory.
Cleaned up some code in hl/c++ that was causing compiler to complain.

Platforms tested:
Cray X1, mir, sleipnir

Misc. update:
2005-05-05 11:51:46 -05:00
Quincey Koziol
6f06567887 [svn-r10723] Purpose:
Bug fix (sorta)

Description:
    Turn down the optimization level for gcc 4.1 also.

Platforms tested:
    FreeBSD 4.11 (sleipnir)
    Not tested w/h5committest
2005-05-04 11:13:07 -05:00
MuQun Yang
65f7a7d2c4 [svn-r10694] Purpose:
Add some comments for handling collective irregular IO with this platform.

Description:

Solution:

Platforms tested:

Misc. update:
2005-04-29 09:37:47 -05:00
John Mainzer
e445e815d6 [svn-r10689] Purpose:
Update config/lt_vers.am


Description:

My version number bump to config/lt_vers.am somehow didn't get checked
in with the rest of the metadata cache API mods.


Solution:

Bumped the version numbers again, and try checking in the file again.


Platforms tested:

None -- but see previous checkin of metadata cache API additions.


Misc. update:
2005-04-28 12:02:35 -05:00
Xiaowen Wu
6876ac9c16 [svn-r10673] Purpose:
New feature.

Description:
	To update libtool's version number for changing API interface
	of H5Psetscaleoffset.

Solution:

Platforms tested:
	heping

Misc. update:
2005-04-26 15:33:24 -05:00
MuQun Yang
c7e6a3d9d8 [svn-r10670]
Purpose:
collective chunk IO support for AIX 5.x
Description:
NCSA just updated its poe version, this new version will support
MPI complicated derived data type.

So update our configuration file for AIX 5.x.

Solution:

Platforms tested:
copper, no need for others since only AIX 5.x will be affected.

Misc. update:
2005-04-26 14:28:54 -05:00
Binh-Minh Ribler
ec33ba8c44 [svn-r10652] Purpose: Update config for AIX
Description:
    Many warnings about duplicate symbols for various members in the std.

Solution:
    Temporarily added -qweaksymbol to suppress linker messages warning
    of duplicate symbols since these warnings are harmless.

    Note from pSeries and AIX Information Center:
        When compiling C++ programs containing extern inline functions,
        you can use the -qweaksymbol compiler option to suppress linker
        messages warning of duplicate symbols.

    Hoping that a better solution is suggested or the problem will be
    handled by the compiler in the future.

Platforms tested:
    AIX 5.1 (copper)
2005-04-23 08:30:51 -05:00
HDF Admin
183741eff0 [svn-r10632] Snapshot version 1.7 release 46 2005-04-20 04:48:31 -05:00
James Laird
d8b08dbc85 [svn-r10627] Purpose:
Feature - libtool shared library versioning

Description:
Libtool provides a mechanism for different versions of the same shared
library to be distinguished.  Now this is applied to HDF5 when it is
built as a shared library.

Solution:
The version number is stored in config/lt_vers.am, and included in
src/Makefile.am.
This number will be automatically updated by bin/h5vers; developers
only need to update it when they change the API.

*** IMPORTANT ***
Any time the API changes, the version number in config/lt_vers.am must
be updated!



Platforms tested:
mir, eirene, verbena, modi4

Misc. update:
2005-04-18 10:48:32 -05:00
MuQun Yang
dd6c600f72 [svn-r10615] Purpose:
Turning off collective irregular selection feature for this platform
because the MPI package doesn't support MPI complicated derived data
type.

Description:

Solution:
Add the macro hdf5_mpi_complex_derived_datatype_works=${hdf5_mpi_complex_derived_datatype_works='no'}
at the end of config file.
Platforms tested:
Won't affect other platform and too minor to go to PSC cluster for testing.

Misc. update:
2005-04-15 15:25:50 -05:00
MuQun Yang
baffe3d733 [svn-r10600]
Purpose:
Fix the daily test failure of collective irregular test in modi4.

Description:
The original test passed with new SGI compiler. Albert verified this from
the SGI machine at DOE. The compiler version number at modi4 is 7.3.1.3m, the compiler version number at DOE  is 7.4.2m. compiler at modi4 is old and SGI may fix some bugs during the updating of their compiler.


Solution:
At configuration file IRIX.6.x, set the macro MPI_COMPLEX_DERIVED_DATATYPE to no. In that way, HDF5 library won't call derived datatype routine in the test.

Platforms tested:
modi4

Misc. update:
2005-04-13 17:29:17 -05:00
James Laird
59ec5b3d66 [svn-r10517] Purpose:
Bug fix

Description:
On some machines, $RUNSERIAL variable needs to be used to run
tests.  Set $RUNTESTS (which is used for non-parallel tests) to
be $RUNSERIAL in configure.am.

Also, since I was updating all Makefiles.in anyway, I updated
commence.am to point to autotools installs in AFS instead of
those on heping.

Platforms tested:
mir, sleipnir, modi4, copper
2005-03-31 13:26:17 -05:00
James Laird
14e06e81cb [svn-r10511]
Purpose:
"Bug fix"

Description:
Hardcoded Makefiles to use /bin/sh instead of letting configure
detect shell automatically.  This is what v1.6 does, and avoids
problems on janus.

Platforms tested:
sleipnir, copper, modi4, mir
2005-03-30 16:14:48 -05:00
James Laird
9452992c09 [svn-r10459]
Purpose:
Added C++ wrapper for Packet Table API.

Description:
Added macro for high-level C++ library (LIBH5CPP_HL), which changes every
Makefile.in.
Added directories for high-level C++ library (though currently only Packet
Table API is supported).
Added both C++ source and tests.

Platforms tested:
sleipnir, mir, modi4

Misc. update:
2005-03-28 11:32:20 -05:00
Albert Cheng
4f0e372f0c [svn-r10249] Purpose:
Added more cached values for more settings.
2005-03-21 16:51:52 -05:00
Raymond Lu
04b7826ed1 [svn-r10218] Purpose: Bug fix
Description:  This commit is actually revision 1.155, which is the 3rd step of
changing conversion test.  It's for conversion from floating-point to integer.

In this step, the source buffer is filled in with normalized and denormalized
floating-point values.  For the normalized values, it starts from FLT(DBL, or
LDBL)_MIN, multiplied by 10(10000 for double, 100000000 for long double) for
the next value, until reaches to FLT_MAX.  For denormalized values, the
exponent part is always 0.  Mantissa part starts with 000...001, 000...011,
000...111, until reaches to 111...111.  The same is with negative values.

There're also fixes in config/hpux11.00 for kelgia where default macro table
size wasn't big enough to handle the big macro in dtypes.c.


Platforms tested: h5committest and kelgia.
2005-03-15 11:31:48 -05:00
MuQun Yang
cfc77c0d78 [svn-r10202] Purpose:
Hard code IBM platform so that the irregular collective IO won't call
MPI derived data type.

Description:
IBM MPI-IO has a bug for MPI derived data type.

Solution:

Platforms tested:
copper(AIX,mpcc_r) and heping(Linux, mpich)

Misc. update:
2005-03-11 17:13:27 -05:00
James Laird
25df1908bc [svn-r10158] Purpose:
Automake version upgrade

Description:
Upgraded automake version from 1.6.2 to 1.9.5.
Changed bin/reconfigure script to use automake 1.9.5.
Changed configure.in and Makefiles to use new FCFLAGS and FC variables
instead of FFLAGS and F9X.
Automake and configure should now do the lion's share of the work
supporting Fortran 9X; macros in acsite.m4 are now mostly unused (will
be cleaned later).
Altered how configure handles pmake; now root-level Makefile.in is
processed by bin/reconfigure to have a .MAKEFLAGS target, since
automake no longer allows us to define unused variables.
Configure now always checks for C++ compiler even if it is not
used, since automake thinks this is the Right Thing To Do and
will break otherwise.

Platforms tested:
Sol, copper, heping, mir, sleipnir, eirene, pommier, kelgia, modi4.
2005-03-07 12:57:27 -05:00
James Laird
081ac87fed [svn-r10064] Purpose:
Bug fix

Description:
This checkin addresses two bugs.
Firstly, I used the wrong semantics when detecting if $MAKE is defined to
the empty string or undefined.
Secondly, pmake on IRIX does not work well with automake's dependency tracking
if the build is not an in-place build.

Solution:
Fixed semantics in configure.in.
Disabled automatic dependency tracking automatically on IRIX.  This is not
the optimal fix, but it should work fine as long as no one is doing HDF5
development on IRIX, and it is much easier than trying to detect the exact
situations in which dependency tracking fails (or than trying to fix dependency
tracking!).

Platforms tested:
heping, modi4 (pmake and gmake)
2005-02-22 12:42:48 -05:00
James Laird
3f0a35a4ea [svn-r9988] Purpose:
Bug fix

Description:
pmake (on modi4, for instance) complains about undefined variables
if it is run without the -V flag, which turns those errors to warnings.

Solution:
Added test to configure.in to see if $MAKE will allow Makefiles
with undefined variables.  If not, sets -V flag in AM_MAKEFLAGS.
Ensured that all custom make targets use AM_MAKEFLAGS.
Also defined all variables that caused errors in top-level Makefile.am.
This means that pmake can be used to build hdf5 *from the top level
only*.  To run make from a subdirectory, still need to use -V flag
(or use make or gmake).

Platforms tested:
modi4, heping, copper, sleipnir
2005-02-11 12:40:52 -05:00
Quincey Koziol
674752ab7d [svn-r9977] Purpose:
Update port

Description:
    Allow FreeBSD builds to use Intel C & F90 compilers (C++ is not working
yet on FreeBSD, so that'll come along later)

Platforms tested:
    FreeBSD 4.11 (sleipnir) w/Intel C & F90 compilers
    Does not affect other platforms...

Misc. update:
2005-02-10 08:30:36 -05:00
James Laird
ab243bf369 [svn-r9920] Purpose:
Bug fix

Description:
Found the permanant fix to automake/CVS dependency problem

Solution:
Added AM_MAINTAINER_MODE macro to configure.in.
Now automake will never try to regenerate Makefiles, Makefiles.in,
configure, H5config.h, etc. when they are out of date, nor will it
print any warnings.
Developers should  be very very careful to use reconfigure script,
and can add --enable-maintainer-mode flag to configure on heping
to regenerate these files correctly.

Platforms tested:
heping sleipnir copper
2005-02-02 15:59:46 -05:00
James Laird
ed8685acd2 [svn-r9915] Purpose:
Bug fix

Description:
Configuration files' timestamps were incorrect.

Solution:
Update Makefiles.in.  Also added correct paths to autotools on heping,
so heping build should be able to re-generate configuration files even
if they are still broken.

Platforms tested:
sleipnir
2005-02-02 11:00:36 -05:00
James Laird
e3dacb31be [svn-r9912] Purpose:
Bug fix

Description:
Dependencies between configure files (aclocal, configure.in, configure,
Makefiles.am and .in) are still causing Makefiles to try to run autotools
during build.

Solution:
Committed all Makefiles.in to update their timestamps.
As a temporary measure, forcibly prevented automake from running
autotools during build by redefining the variables it uses.

Platforms tested:
sleipnir (No changes to Makefile content)
2005-02-01 16:05:33 -05:00
James Laird
30bfb1e0ea [svn-r9907] Purpose:
Bug fix

Description:
Different compilers use different flags to include Fortran module files

Solution:
Changed boilerplate to use configure variable rather than hardcoded -M flag.

Platforms tested:
sleipnir, sol, copper
2005-02-01 10:27:37 -05:00
James Laird
26303241fe [svn-r9902] Purpose:
Configuration feature

Description:
HDF5 now uses automake to generate Makefiles

Solution:
Makefile.in files are now generated from Makefile.am files.
To reconfigure (after chaning a Makefile.am or configure.in):
/bin/sh bin/reconfigure.sh

Platforms tested:
Many
2005-01-31 22:17:02 -05:00
Xuan Bai
4f79e35b33 [svn-r9842] Purpose:
Add a new configure shell script under /config to support configuration for cygwin.

Description:

Solution:

Platforms tested:
cygwin 1.5.11, VS 6.0 on windows xp, Linux 2.4 and sol 2.7.

Misc. update:
2005-01-20 15:31:31 -05:00
Quincey Koziol
7b10edb121 [svn-r9836] Purpose:
Bug fix

Description:
    Fix detection of C++ compiler version number.

Platforms tested:
    Solaris 2.7 (arabica) w/C++
    Solaris 2.8 (sol) w/C++
    Does not require h5committest
2005-01-18 21:37:16 -05:00
Raymond Lu
96cc43235e [svn-r9819] Purpose: Bug fix
Description:  The fix of the loss problem of the last 2 bytes of mantissa on sleipnir has
not been successful.  It happens when converting from unsigned long long to long double.
 The failure has been on and off.

Solution:  Hard set a macro to disable unsigned long long->long double for FreeBSD until
a good solution is found to solve this elusive problem.

Platforms tested: sleipnir and fuss.  Only sleipnir is concerned.

Misc. update:
2005-01-13 17:01:52 -05:00
Raymond Lu
7945e9929e [svn-r9809] Purpose: bug fix
Description:  For HP-UX11.00, compiler's casting from 'long double' to most of
integers.  A macro was hard set in config/hpux11.00 before.

Solution:  Let configure detect this case and set the macro.

Platforms tested:  kelgia, fuss, modi4.  These systems are mainly concerned.
2005-01-11 16:05:21 -05:00
Quincey Koziol
c04b612eb4 [svn-r9801] Purpose:
Bug fix

Description:
    Belatedly chase change of hobj_ref_t in C APIs.

Platforms tested:
    FreeBSD 4.10 (sleipnir) w/backward compatibility turned on
    IRIX64 6.5 (modi4) w/FORTRAN
    h5committest
2005-01-10 17:56:20 -05:00
Raymond Lu
7faa297ea6 [svn-r9783] Purpose: Bug fix
Description: For HP-UX 11.00, the compiler generates 'floating exception'
when converting 'long double' to most of integer types.

Solution: Define a macro for all other systems except HP-UX 11.00.  Hard set
this macro to 'no' in config/hpux11.00 to skip this test for HP-UX 11.00.

Platforms tested:  modi4, kelgia, fuss
2005-01-08 15:56:12 -05:00
Raymond Lu
82f6a72ec9 [svn-r9755] Purpose: New feature
Description:  Start to support software conversion between long double and
all integers.

Solution:  No major changes to the algorithm.  Changes to configure is to
exclude SGI for long double to integers test because there're too many problems
in their compiler.

Platforms tested:  h5committest, modi4, fuss, Teragrid, arabica

Misc. update:  RELEASE.txt
2005-01-06 13:17:59 -05:00
Elena Pourmal
fdde90dcb7 [svn-r9743] Purpose: Bug fix (by Binh-Minh)
Description: C++ build failed on kelgia. Binh-Minh fixed
             it for 1.6 branch, I am bringing changes back to
             1.7

Solution:

Platforms tested: kelgia

Misc. update:
2005-01-04 16:44:00 -05:00
Quincey Koziol
427ff7da28 [svn-r9727] Purpose:
Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-)

Description:
    Generally speaking, this is the "signed->unsigned" change to selections.
However, in the process of merging code back, things got stickier and stickier
until I ended up doing a big "sync the two branches up" operation.  So... I
brought back all the "infrastructure" fixes from the development branch to the
release branch (which I think were actually making some improvement in
performance) as well as fixed several bugs which had been fixed in one branch,
but not the other.

    I've also tagged the repository before making this checkin with the label
"before_signed_unsigned_changes".

Platforms tested:
    FreeBSD 4.10 (sleipnir) w/parallel & fphdf5
    FreeBSD 4.10 (sleipnir) w/threadsafe
    FreeBSD 4.10 (sleipnir) w/backward compatibility
    Solaris 2.7 (arabica) w/"purify options"
    Solaris 2.8 (sol) w/FORTRAN & C++
    AIX 5.x (copper) w/parallel & FORTRAN
    IRIX64 6.5 (modi4) w/FORTRAN
    Linux 2.4 (heping) w/FORTRAN & C++


Misc. update:
2004-12-29 09:26:20 -05:00
Binh-Minh Ribler
09c2b51e71 [svn-r9703] Purpose: Update CXXFLAGS
Description:
    Changed -instances=global to -instances=static to avoid multiple
    copies of template function verify_val.

Platforms tested:
    SunOS 5.7 (arabica)
2004-12-22 23:43:33 -05:00
Albert Cheng
bf9c37e071 [svn-r9691] Description:
mpich 1.2.6 does not like the tweaking of using -O2 flag.
Comment out the Tweaking since it caused problems to mpich1.2.6.
Need to investigate the reasons and effects to tweak.


Platforms tested:
Tested in heping using mpich 1.2.6 and in eirene uisng mpich 1.2.6.
2004-12-18 15:34:25 -05:00
Quincey Koziol
5387f65eef [svn-r9684] Purpose:
Port

Description:
    Initial work for supporting GNU FORTRAN/F95 on FreeBSD.  I think I've
got things mostly set up correctly, but I'm getting an internal compiler
error on one of the FORTRAN sources, so I'm not going to add this configuration
to the daily tests yet.

Platforms tested:
    FreeBSD 4.10 (sleipnir) w/GNU FORTRAN
    Not tested in h5committest
2004-12-16 21:27:41 -05:00
Albert Cheng
2d2522f666 [svn-r9662] Purpose:
Bug fix.

Description:
MIPSpro Compiler 7.4.x starts to support C99 features
but stdint.h has a "guard" in it that will #error if
cc is invoked without asking for C99 standard.  But it
does not result with a non-zero compiler exit code, thus
configure thought it is okay to use header file stdint.h.
This causes problems later.

Solution:
Default to use the C99 compiler if available.

Platforms tested:
Tested in Sandia tesla machine which is a new SGI machine.
2004-12-13 17:29:45 -05:00
Albert Cheng
bdc10cce53 [svn-r9631] Purpose:
Improvement

Description:
Added strip option to PROD_CFLAGS to remove symbols for smaller
production file size.

Solution:

Platforms tested:

Misc. update:
2004-12-07 13:25:43 -05:00
Albert Cheng
2735166820 [svn-r9629] Purpose:
Bug fix.

Description:
Last commit would impose $arch even if user has provided his own
$CFLAGS.  Fixed it.
Removed the wording of gnu-flags inherited from the copy.

Platforms tested:
Tested in tg-ncsa.

Misc. update:
2004-12-07 12:12:18 -05:00
Quincey Koziol
4954609870 [svn-r9625] Purpose:
Code cleanup

Description:
    Clean/fix up compiler flags to be more consistent after recent changes.

Platforms tested:
    None - eyeballed - very minor
2004-12-07 09:55:40 -05:00
Albert Cheng
f640fbff8c [svn-r9624] Purpose:
Bug fix.

Description:
Cache the gettimeofday_tz as yes.
Patches for conversion problems of Long Long, float, bottom bits, etc.

Platforms tested:
Tested in tflops only.

Misc. update:
2004-12-07 09:06:06 -05:00
Albert Cheng
33cb85337a [svn-r9623] Purpose:
Bug fix.

Description:
Restored correct setting of compilers (-Wall etc for debug flags
only, c99 by default,...) that were wiped out by the commits before.

Platforms tested:
Tested in TG-NCSA, both production and development mode.
(Still need to figure out the proper flag to use for Profile.)
2004-12-06 18:20:49 -05:00
Albert Cheng
c6ea65a67e [svn-r9619] Purpose:
Bug fix.

Description:
v8.0 -O3 infinite loops when compiling test/tselect.c. Use -O2.

Platforms tested:
Only tested in TG-NCSA, use both default and --disable-production options.
2004-12-06 17:18:11 -05:00