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Author SHA1 Message Date
Allen Byrne
b968f9273a Allow option to select NAMESPACE 2019-03-28 16:40:45 -05:00
Allen Byrne
c8494e34d1 Merge pull request #1625 in HDFFV/hdf5 from ~BYRN/hdf5_merge_adb:develop to develop 
* commit '90a58f2b2f5a612ce7326fbfe3a476e31d148084':
  Correct examples for packaging
 2019-03-28 16:37:40 -05:00
Allen Byrne
90a58f2b2f Correct examples for packaging 2019-03-28 16:37:11 -05:00
Scot Breitenfeld
b530043b7a Merge pull request #1614 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit 'a1d7a9b8592e8b842b940f43733cc2df5d5d81bb':
  HDFFV-10738 Wrong INTENT for H5LTread_dataset_double_f
 2019-03-26 13:30:37 -05:00
M. Scot Breitenfeld
a1d7a9b859 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2019-03-25 10:02:01 -05:00
M. Scot Breitenfeld
b2423350f4 HDFFV-10738 Wrong INTENT for H5LTread_dataset_double_f 
Fixed.

Also fixed INTENT issues for H5DS, H5IM and H5TB when reading or getting.
 2019-03-25 10:00:31 -05:00
Binh-Minh Ribler
d818edb110 Merge pull request #1610 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_fixbug:develop to develop 
* commit 'fe104cc38ffbdb39d3e04da107d86ebfc7e8b622':
  Test improvement Description     Moved the new tests to a more appropriate test function. Platforms tested:     Linux/64 (jelly)
  Fixed HDFFV-10210 and HDFFV-10587 Description:     - Added parameter validation (HDFFV-10210)     - Added detection of division by zero (HDFFV-10587 - CVE-2018-17438)     - Fixed typos in various tests Platforms tested:     Linux/64 (jelly)     Linux/64 (platypus)     Darwin (osx1011test)
 2019-03-23 21:10:30 -05:00
Dana Robinson
02abb65dde Merge pull request #1611 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:tfile_vfd to develop 
* commit 'b66df06dbf607741127137ebfda373890cb37649':
  Changes that show the right way to iterate over enums.
  Changes that show the right way to iterate over enums.
  Used the H5_INC_ENUM macro to squash enum value increment warnings.
 2019-03-21 13:21:15 -05:00
Dana Robinson
b66df06dbf Merge branch 'tfile_vfd' of https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into tfile_vfd 2019-03-21 10:19:32 -07:00
Dana Robinson
85e2214d55 Changes that show the right way to iterate over enums. 2019-03-21 10:18:16 -07:00
Dana Robinson
ef8aa13174 Changes that show the right way to iterate over enums. 2019-03-21 10:09:55 -07:00
Binh-Minh Ribler
fe104cc38f Test improvement 
Description
    Moved the new tests to a more appropriate test function.
Platforms tested:
    Linux/64 (jelly)
 2019-03-21 11:09:17 -05:00
Dana Robinson
97cdcc47e4 Used the H5_INC_ENUM macro to squash enum value increment warnings. 2019-03-21 01:15:09 -07:00
Allen Byrne
b01b84f245 Merge pull request #1608 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '7a589a0a39bc3b46981f4902e5fc1150c05ecebd':
  Fix CMake error in name
 2019-03-20 16:05:30 -05:00
Binh-Minh Ribler
222346f373 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_fixbug into develop 2019-03-20 14:07:40 -05:00
Binh-Minh Ribler
7add52ff4f Fixed HDFFV-10210 and HDFFV-10587 
Description:
    - Added parameter validation (HDFFV-10210)
    - Added detection of division by zero (HDFFV-10587 - CVE-2018-17438)
    - Fixed typos in various tests
Platforms tested:
    Linux/64 (jelly)
    Linux/64 (platypus)
    Darwin (osx1011test)
 2019-03-20 14:03:48 -05:00
Allen Byrne
7a589a0a39 Fix CMake error in name 2019-03-19 14:47:08 -05:00
Dana Robinson
604b67df19 Merge pull request #1607 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to develop 
* commit '2e867d2a6dd5f330011f20333064aa0c12464d59':
  Commented out memcpy overlap check while we investigate parallel filters issues.
 2019-03-18 22:39:30 -05:00
Dana Robinson
2e867d2a6d Commented out memcpy overlap check while we investigate 
parallel filters issues.
 2019-03-18 19:06:58 -07:00
Dana Robinson
c50b7c4b7e Merge pull request #1606 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to develop 
* commit '2db272521e2da51663aa65fc9297cd6cf763e641':
  Yanked check for memcpy n > 0
 2019-03-17 20:34:15 -05:00
Dana Robinson
2db272521e Yanked check for memcpy n > 0 2019-03-17 16:01:31 -07:00
Dana Robinson
f0d22e54c7 Merge pull request #1604 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to develop 
* commit '5c80d3d91284bdcd048d9325b1a601d0ddfca8bd':
  - Added H5MMprivate.h #includes where needed - Added casts to quiet H5MM_memcpy warnings - Removed char * casts from HDmemcpy
  Added an H5MM_memcpy call that checks for buffer overlap.
 2019-03-16 21:58:38 -05:00
Dana Robinson
5c80d3d912 - Added H5MMprivate.h #includes where needed 
- Added casts to quiet H5MM_memcpy warnings
- Removed char * casts from HDmemcpy
 2019-03-16 16:02:06 -07:00
Dana Robinson
a98747c0f9 Added an H5MM_memcpy call that checks for buffer overlap. 2019-03-16 08:06:52 -07:00
Dana Robinson
d2591ce377 Merge pull request #1602 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:wopen_squash to develop 
* commit '0c20c65e2f3abf390ad87c9167daca4cdff2de39':
  Added the HDopen work-around on windows to pio_engine.c
  Adds _wopen support on Windows so that files with UTF-8 names can be opened.
 2019-03-15 10:47:02 -05:00
Dana Robinson
0c20c65e2f Added the HDopen work-around on windows to pio_engine.c 2019-03-15 08:45:38 -07:00
Neil Fortner
a0c5d9a1d3 Merge pull request #1594 in HDFFV/hdf5 from ~NFORTNE2/hdf5_naf:develop to develop 
Fix issues with direct chunk operations and the single chunk index.

* commit 'c812a6c9ec5ff440dc405167c54b86fdb18dcfa4':
  Fix issue with direct chunk write not updating the "last chunk" index cache.  Fix issues involving datasets being "no allocated" when they contain cached raw data.
 2019-03-15 10:22:12 -05:00
Neil Fortner
c812a6c9ec Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into develop 2019-03-15 10:20:25 -05:00
Dana Robinson
750b5c2930 Adds _wopen support on Windows so that files with UTF-8 names 
can be opened.

Fixes: HDFFV-2714, HDFFV-3914, HDFFV-3895, HDFFV-8237, HDFFV-10413, HDFFV-10691
 2019-03-15 00:41:39 -07:00
Jerome Soumagne
0ea7aa89ff Merge pull request #1601 in HDFFV/hdf5 from ~JSOUMAGNE/hdf5:topic_thread_private to develop 
* commit 'dc69df49e6a8896606c9e4bd0987613a02f7a25a':
  CMake: fix pthread linking to only be private
 2019-03-13 15:25:23 -05:00
Jerome Soumagne
dc69df49e6 CMake: fix pthread linking to only be private 2019-03-13 13:54:35 -05:00
Quincey Koziol
07baf44a86 Merge pull request #1599 in HDFFV/hdf5 from preserve_lib_state to develop 
* commit '86598573641dfa27278c9e29df0fa79bd7d8e07f':
  Add API routines to retrieve, restore, reset, and free library state.
 2019-03-12 11:48:11 -05:00
Quincey Koziol
8659857364 Add API routines to retrieve, restore, reset, and free library state. 
(Primarily for use in the async VOL connector, which has to schedule API
operations for future execution and then restore the state of the library when
the operation actually executes)
 2019-03-11 17:29:14 -05:00
Ray Lu
679b49d43d Merge pull request #1597 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:HDFFV-10705-memory-leak-in-scale-offset-2 to develop 
* commit '5f22afff3a05a2c8fc694ddb0c7e1081a660b398':
  Added a note of bug fix for HDFFV-10705.
 2019-03-08 14:28:17 -06:00
Songyu Lu
5f22afff3a Added a note of bug fix for HDFFV-10705. 2019-03-08 13:51:27 -06:00
Dana Robinson
a56a97f979 Merge pull request #1595 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to develop 
* commit 'fc3f606d5c30d614b7e6cddaf4d0dafd80987bec':
  Fixed the MANIFEST
 2019-03-07 17:47:13 -06:00
Dana Robinson
fc3f606d5c Fixed the MANIFEST 2019-03-07 14:38:11 -08:00
Larry Knox
8d2a047c25 Merge pull request #1593 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit '775e3740d64ca9a8a31ded673e93815d76387dad':
  Update documents following DHF5 1.10.5 release.
 2019-03-07 12:51:27 -06:00
Neil Fortner
faec33960f Fix issue with direct chunk write not updating the "last chunk" index 
cache.  Fix issues involving datasets being "no allocated" when they
contain cached raw data.
 2019-03-06 16:57:42 -06:00
Quincey Koziol
cdec6ca87f Merge pull request #1592 in HDFFV/hdf5 from dset_ohdr_min_fix to develop 
* commit '33db9f56449c974fed6b4a8a19072546bcd31e15':
  Fix typo.
  Move 'minimize dataset object header flag' into API context
 2019-03-06 10:18:33 -06:00
Quincey Koziol
33db9f5644 Fix typo. 2019-03-05 17:33:13 -06:00
Larry Knox
775e3740d6 Update documents following DHF5 1.10.5 release. 2019-03-05 17:23:56 -06:00
Quincey Koziol
b8468e6fdb Move 'minimize dataset object header flag' into API context 2019-03-05 10:36:28 -06:00
Ray Lu
5182e73d5e Merge pull request #1588 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:HDFFV-10705-memory-leak-in-scale-offset to develop 
* commit 'b23079de3af4bfb7aa0508fb81aacd67a76c2114':
  HDFFV-10705: Fixed memory leak in scale offset filter.
 2019-03-01 11:32:14 -06:00
Songyu Lu
b23079de3a HDFFV-10705: Fixed memory leak in scale offset filter. 2019-02-28 14:36:38 -06:00
Allen Byrne
d2dfe6ccbe Merge pull request #1582 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '64f21ec6397d00e45ff4d41e70c5131241be587e':
  Correct CMake examples for a binary install
  Correct varname
 2019-02-27 13:34:23 -06:00
Allen Byrne
64f21ec639 Correct CMake examples for a binary install 2019-02-27 11:13:54 -06:00
Allen Byrne
6e77a5800e Correct varname 2019-02-26 10:40:40 -06:00
Quincey Koziol
d0329ea063 Merge pull request #1580 in HDFFV/hdf5 from update_vol_callbacks to develop 
* commit 'd6663b95ac7e9e378b24bd721ea4403ca98d4adf':
  Revise "management" VOL callbacks into 'info' and object 'wrap / retrieval' classes.
 2019-02-25 10:02:08 -06:00
Quincey Koziol
d6663b95ac Revise "management" VOL callbacks into 'info' and object 'wrap / retrieval' 
classes.
 2019-02-23 17:02:29 -06:00