Commit Graph

16527 Commits

Author SHA1 Message Date
lrknox
c1f95b28ca Revert "Clear hdf5 1.10 entries from RELEASE.txt in the develop branch. Entries"
This reverts commit 1a114c191d.
2017-03-29 13:55:41 -05:00
lrknox
ef297238bd Add LBNL license file and modify COPYING file accordingly. 2017-03-29 13:36:52 -05:00
Allen Byrne
ebc0a62517 Merge branch 'develop' into hdf5_1_10 2017-03-29 09:14:42 -05:00
Allen Byrne
ac40086b72 Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)
* commit '3dbfc568d7717d0252a4c91c9883d02a5574b3c1':
  Resolve conflict missed in merge.
  Clear hdf5 1.10 entries from RELEASE.txt in the develop branch.  Entries in this branch version of RELEASE.txt should be intended for the future 1.12.0 release.
  Update with extra checks for reference
  Update cdash max test output and VS version matching
  Stop skipping h5watch tests.
  Add H5_DLL to H5AC_get_mdc_image_info() prototype
  Update RELEASE.txt based on review comments from pull request.
  Description:     Removed notes about the C++ API in develop.  Only keep in 1.10 branch.
  Add prototype for H5AC_get_mdc_image_info
  Minor style cleanups
  Revert "Switch h5clear for cache images to use existing H5Pget_cache_image_config()"
  Update RELEASE.txt to reflect changes for new features and bug fixes since 1.10.0-patch1.
  Run all scripts using signal files between processes in their own directories to avoid accidental deletion of the signal files.
  Remove extra space added by h5vers to version string in H5.java, which then failed to match the pattern after the first run.
  Remove incorrect " marks added to java files by bin/h5vers. Pull version from configure for version test in h5repack_plugin.sh.in
  Description:     Fixed typos and missing items in function headers, that were revealed     by Doxygen, and revised various comments. Platforms tested:     Linux/32 2.6 (jam)     Linux/64 (platypus)     Darwin (osx1010test)
  Description:     Updated the C++ API sections.
  Extend h5vers to update version strings in java files and h5repack version test expected output file.
  Run swmr tests in their own subdirectory of test to avoid signal file deletion by other tests.
2017-03-29 09:08:06 -05:00
Larry Knox
3dbfc568d7 Merge pull request #377 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit 'a1dc1a5f28b99d30b7870f764c288995cabc7ad0':
  Resolve conflict missed in merge.
  Clear hdf5 1.10 entries from RELEASE.txt in the develop branch.  Entries in this branch version of RELEASE.txt should be intended for the future 1.12.0 release.
  Update with extra checks for reference
  Update cdash max test output and VS version matching
  Stop skipping h5watch tests.
  Add H5_DLL to H5AC_get_mdc_image_info() prototype
  Update RELEASE.txt based on review comments from pull request.
  Description:     Removed notes about the C++ API in develop.  Only keep in 1.10 branch.
  Add prototype for H5AC_get_mdc_image_info
  Minor style cleanups
  Revert "Switch h5clear for cache images to use existing H5Pget_cache_image_config()"
  Update RELEASE.txt to reflect changes for new features and bug fixes since 1.10.0-patch1.
  Run all scripts using signal files between processes in their own directories to avoid accidental deletion of the signal files.
  Remove extra space added by h5vers to version string in H5.java, which then failed to match the pattern after the first run.
  Remove incorrect " marks added to java files by bin/h5vers. Pull version from configure for version test in h5repack_plugin.sh.in
  Description:     Fixed typos and missing items in function headers, that were revealed     by Doxygen, and revised various comments. Platforms tested:     Linux/32 2.6 (jam)     Linux/64 (platypus)     Darwin (osx1010test)
  Description:     Updated the C++ API sections.
  Extend h5vers to update version strings in java files and h5repack version test expected output file.
  Run swmr tests in their own subdirectory of test to avoid signal file deletion by other tests.
2017-03-28 16:55:26 -05:00
lrknox
a1dc1a5f28 Resolve conflict missed in merge. 2017-03-28 16:36:30 -05:00
lrknox
c7f3365015 Merge branch 'develop' into hdf5_1_10 2017-03-28 16:29:11 -05:00
Allen Byrne
77e1f1e491 HDFFV-10143 add APIs to manipulate plugin path table 2017-03-28 14:15:13 -05:00
Allen Byrne
7fd79abc0c Remove duplicated paths, add new paths 2017-03-28 13:42:00 -05:00
Allen Byrne
98e4bfec5a Merge pull request #5 in ~BYRN/hdf5_adb from bugfix/HDFFV-10143-programmatic-setting-plugin-path to develop
* commit 'bb80ae98543f80779ef726a20460b9b180b5cd2b':
  HDFFV-10143 add APIs to manipulate plugin path table
2017-03-28 13:36:52 -05:00
Allen Byrne
bb80ae9854 HDFFV-10143 add APIs to manipulate plugin path table 2017-03-28 13:35:49 -05:00
mainzer
afd8f64c29 Omnibus checkin for several relatively minor modifications:
1) Added code test/page_buffer.c to verify that page buffering is
   disabled in parallel builds.

2) Added code to test/cache_image.c to verify correct interaction
   between evict on close and cache image -- in particular management
   of a file containing a cache image containing dirty metadata that
   has been opened R/O.  Also fix for the bug exposed.

3) Added code to testpar/t_cache_image.c to verify expected procedure
   for reading cache images, and also supporting stats collection code
   needed for the test.

4) Repair of an overactive sanity check in H5C__reconstruct_cache_contents().

5) Other minor tidies in passing.

Tested serial and parallel, debug and production on Jelly.
2017-03-28 11:21:40 -05:00
lrknox
1a114c191d Clear hdf5 1.10 entries from RELEASE.txt in the develop branch. Entries
in this branch version of RELEASE.txt should be intended for the future
1.12.0 release.
2017-03-28 10:06:18 -05:00
Allen Byrne
09f8d2f37e Merge pull request #4 in ~BYRN/hdf5_adb from develop to bugfix/HDFFV-10143-programmatic-setting-plugin-path
* commit 'be028580c8789301e4106d8d6e79a8fc8300e706':
  Update with extra checks for reference
  Update cdash max test output and VS version matching
  Stop skipping h5watch tests.
  Add H5_DLL to H5AC_get_mdc_image_info() prototype
  Update RELEASE.txt based on review comments from pull request.
  Description:     Removed notes about the C++ API in develop.  Only keep in 1.10 branch.
  Add prototype for H5AC_get_mdc_image_info
  Minor style cleanups
  Revert "Switch h5clear for cache images to use existing H5Pget_cache_image_config()"
  Update RELEASE.txt to reflect changes for new features and bug fixes since 1.10.0-patch1.
  Run all scripts using signal files between processes in their own directories to avoid accidental deletion of the signal files.
  Remove extra space added by h5vers to version string in H5.java, which then failed to match the pattern after the first run.
  Remove incorrect " marks added to java files by bin/h5vers. Pull version from configure for version test in h5repack_plugin.sh.in
  Description:     Fixed typos and missing items in function headers, that were revealed     by Doxygen, and revised various comments. Platforms tested:     Linux/32 2.6 (jam)     Linux/64 (platypus)     Darwin (osx1010test)
  Description:     Updated the C++ API sections.
  Extend h5vers to update version strings in java files and h5repack version test expected output file.
  Add reference to CMake application framwork
  Whitespace changes
  Update notes
  Run swmr tests in their own subdirectory of test to avoid signal file deletion by other tests.
2017-03-28 09:36:31 -05:00
Binh-Minh Ribler
52f8c2ed49 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop 2017-03-27 23:39:10 -05:00
Binh-Minh Ribler
37c56ebd37 Fix HDFFV-8089
Description:
    Some code within an "ifdef H5D_CHUNK_DEBUG" block was using outdated
    data structure but not caught because the case of H5D_CHUNK_DEBUG being
    defined was never tested.  It was commented out.
    I defined H5D_CHUNK_DEBUG, tested, and commented out again.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2017-03-27 23:38:35 -05:00
Allen Byrne
be028580c8 Merge pull request #373 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '5d830b1873c67def2d781acf9cc14ea8c3304c02':
  Update with extra checks for reference
  Update cdash max test output and VS version matching
2017-03-27 17:05:27 -05:00
Allen Byrne
9b59aeadf0 Update macros to match master and fix VS matches 2017-03-27 12:57:31 -05:00
Allen Byrne
5d830b1873 Update with extra checks for reference 2017-03-27 10:41:30 -05:00
Allen Byrne
4a60f5a057 Update cdash max test output and VS version matching 2017-03-27 08:42:32 -05:00
Elena Pourmal
5ef71ceb1d Merge pull request #372 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'ea6c20fdc6f9aef7b43a41f9a3bbd8886cd2f261':
  Stop skipping h5watch tests.
2017-03-24 16:34:19 -05:00
lrknox
ea6c20fdc6 Stop skipping h5watch tests. 2017-03-24 16:30:45 -05:00
Larry Knox
78f488b0b4 Merge pull request #368 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '00a19eebf00f17736ca01d2375ebdb05e5f817d8':
  Update RELEASE.txt Remove "currently under development" from h5vers for HDF5Config.cmake that causes cmake not to find HDF5.
  Merge bin/h5vers changes from develop. Pull version from configure for version test in h5repack_plugin.sh.in Update version to 1.10.2-snap0 for hdf5_1_10 branch.
2017-03-24 13:44:36 -05:00
lrknox
00a19eebf0 Update RELEASE.txt Remove "currently under development" from h5vers for
HDF5Config.cmake that causes cmake not to find HDF5.
2017-03-24 13:42:30 -05:00
Quincey Koziol
4d0bcf91b6 Merge pull request #362 in HDFFV/hdf5 from merge_h5clear_revert_02 to develop
* commit 'ddb870b4b67590e5624e40eb51d807914e016a46':
  Add H5_DLL to H5AC_get_mdc_image_info() prototype
  Add prototype for H5AC_get_mdc_image_info
2017-03-24 10:26:46 -05:00
Quincey Koziol
ddb870b4b6 Add H5_DLL to H5AC_get_mdc_image_info() prototype 2017-03-24 08:25:18 -07:00
lrknox
972344e231 Merge bin/h5vers changes from develop.
Pull version from configure for version test in h5repack_plugin.sh.in
Update version to 1.10.2-snap0 for hdf5_1_10 branch.
2017-03-23 20:03:27 -05:00
Larry Knox
87dceab9de Merge pull request #366 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '84b6746c734fe2be7e9c7ffc2db25a0f0deeceaf':
  Merge pull request #359 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
  Set shared object version numbers (for lib.so files) to appropriate numbers for HDF5 1.10.1 release according to the interface compatibility report with respect to HDF5 1.10.0-patch1.
2017-03-23 17:34:51 -05:00
Vailin Choi
84b6746c73 Merge pull request #359 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '436bfedcbd1152e9aa47d50f9d8ad78817488ce1':
  Update RELEASE.txt based on review comments from pull request.
  Update RELEASE.txt to reflect changes for new features and bug fixes since 1.10.0-patch1.
2017-03-23 17:31:22 -05:00
lrknox
28136f6082 Set shared object version numbers (for lib.so files) to appropriate
numbers for HDF5 1.10.1 release according to the interface compatibility
report with respect to HDF5 1.10.0-patch1.
2017-03-23 17:21:20 -05:00
Larry Knox
7ba3ec057e Merge pull request #364 in HDFFV/hdf5 from ~BMRIBLER/hdf5_1_10_bmr:hdf5_1_10 to hdf5_1_10
* commit 'f8d954c0b0a79e2d8d513e180358866e5269229b':
  Added more notes to the C++ API sections.
  Description:     Added more notes and made some improvements in the C++ API sections.
2017-03-23 16:28:19 -05:00
Vailin Choi
9215a30b0b Merge pull request #359 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '436bfedcbd1152e9aa47d50f9d8ad78817488ce1':
  Update RELEASE.txt based on review comments from pull request.
  Update RELEASE.txt to reflect changes for new features and bug fixes since 1.10.0-patch1.
2017-03-23 16:08:49 -05:00
Vailin Choi
436bfedcbd Update RELEASE.txt based on review comments from pull request. 2017-03-23 12:35:21 -05:00
Binh-Minh Ribler
f8d954c0b0 Added more notes to the C++ API sections. 2017-03-23 11:42:15 -05:00
Larry Knox
d339292774 Merge pull request #365 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit 'd0b1c6f6edab9b80e74c5bf80e15f8952915ac34':
  Add H5_DLL to function prototype.
  Merge pull request #361 in HDFFV/hdf5 from merge_h5clear_revert to develop
  Add prototype for H5AC_get_mdc_image_info
  Moved Centos 6 from Supported Platforms to Other Tested Platforms and removed Centos 6 entries from the Tested Configuration Features Summary.
2017-03-23 00:14:09 -05:00
lrknox
d0b1c6f6ed Add H5_DLL to function prototype. 2017-03-23 00:05:51 -05:00
Quincey Koziol
9ab96feda6 Merge pull request #361 in HDFFV/hdf5 from merge_h5clear_revert to develop
* commit '46c9ab600de491657520897322b75659c3bdfb5f':
  Minor style cleanups
  Revert "Switch h5clear for cache images to use existing H5Pget_cache_image_config()"
2017-03-23 00:04:49 -05:00
Quincey Koziol
a533dba4d1 Add prototype for H5AC_get_mdc_image_info 2017-03-23 00:01:04 -05:00
Binh-Minh Ribler
4f80a95751 Merge pull request #363 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop to develop
* commit 'f21b268812b10e11ee98be17dd121e6a43525aef':
  Description:     Removed notes about the C++ API in develop.  Only keep in 1.10 branch.
2017-03-22 22:32:30 -05:00
Binh-Minh Ribler
6c9bf4b47a Merge branch 'hdf5_1_10' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_1_10_bmr into hdf5_1_10 2017-03-22 22:28:33 -05:00
Binh-Minh Ribler
a3d7c4703b Description:
Added more notes and made some improvements in the C++ API sections.
2017-03-22 22:26:33 -05:00
Binh-Minh Ribler
f21b268812 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop 2017-03-22 22:12:43 -05:00
Binh-Minh Ribler
3f1029a352 Description:
Removed notes about the C++ API in develop.  Only keep in 1.10 branch.
2017-03-22 22:11:24 -05:00
Quincey Koziol
e4114236e3 Add prototype for H5AC_get_mdc_image_info 2017-03-22 15:15:51 -07:00
Quincey Koziol
dfc0b2f4f6 Merge pull request #361 in HDFFV/hdf5 from merge_h5clear_revert to develop
* commit '46c9ab600de491657520897322b75659c3bdfb5f':
  Minor style cleanups
  Revert "Switch h5clear for cache images to use existing H5Pget_cache_image_config()"
2017-03-22 17:07:34 -05:00
lrknox
7f53978593 Moved Centos 6 from Supported Platforms to Other Tested Platforms and
removed Centos 6 entries from the Tested Configuration Features Summary.
2017-03-22 16:45:06 -05:00
Larry Knox
489409b3e4 Merge pull request #360 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit 'd37561605bda978ef8e5de03997dca4e493e213b':
  Merge pull request #358 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
2017-03-22 13:59:51 -05:00
Quincey Koziol
46c9ab600d Minor style cleanups 2017-03-22 10:54:25 -07:00
Quincey Koziol
161a3b9516 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into develop 2017-03-22 10:39:12 -07:00
lrknox
d37561605b Merge branch 'hdf5_1_10' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_10 2017-03-22 12:01:22 -05:00