Commit Graph

10 Commits

Author SHA1 Message Date
Allen Byrne
e21f7aaac4
Tools long double updates (#522)
* OESS-98 convert plugin option to FetchContent, add tests

* Fixes for pkcfg files because of plugin option

* OESS-98 fix tools test for plugins

* Keep doxygen comments under 100 chars long - format hint

* Whitespace

* HDFFV-11144 - Reclassify CMake messages

* HDFFV-11099/11100 added help text

* Reworked switch statement to compare string instead

* Fix typo

* Update CDash mode

* Correct name of threadsafe

* Correct option name

* Undo accidental commit

* Note LLVM 10 to 11 format default changes

* Update format plugin

* Undo clang-format version 11 changes

* One more correction

* Update supported platforms

* Revert whitespace changes

* Correct whitespace

* Changes from PR#3

* HDFFV-11213 added option to control gcc10 warnings diagnostics

* HDFFV-11212 Use the new references correctly in JNI utility and tests

* format source

* Fix typo

* Add new test file

* HDFFV-11212 - update test and remove unused arg

* Minor non-space formatting changes

* Use H5I_INVALID_ID instead of "-1"

* source formatting

* add missing testfile, update jni function

* Undo commit of debug code

* remove mislocated file

* Fix h5repack test for handling of fapls and id close

* Update h5diff test files usage text

* HDFFV-11212 add new ref tests for JNI export dataset

* src format update

* Remove blank line typo

* src format typo

* long double requires %Lg

* Another long double foramt specifer S.B. %Lg

* issue with t128bit test

* Windows issue with h5dump and type.

* Fix review issues

* refactor function nesting and fix error checks

* format fixes

* Remove untested functions and javadoc quiet comments

* Restore TRY block.

* Change string append errors to memory exception

* revert to H5_JNI_FATAL_ERROR - support functions need work

* Add assertion error for h5util functions

* remove duplicate function

* format fix

* Revert HD function error handling

* Update copyright comments

* GH #386 java folder copyright corrections

* Whitespace

* GH #359 implement and fix tools 1.6 API usage

* remove excessive comments

* Flip inits to correct ifdef section

* rework ifdef to be simpler

* format issue

* Reformat ifdef inits

* remove static attribute

* format compliance

* Update names

* Revert because logic relies on float not being int

* Changes noticed from creating merge of #412

* Double underscore change

* Correct compiler version variable used

* Remove header guard underscores

* Whitespace cleanup

* Split format source and commit changes on repo push

* remove pre-split setting

* Change windows TS to use older VS.

* correct window os name

* HDFFV-11212 JNI export util and Javadoc

* Suggested review changes

* Another change found

* Committing clang-format changes

* HDFFV-11113 long double in tools

* HDFFV-11113 add note

* Disable long double tests for now

* HDFFV-11228 remove arbitrary CMake warning groups.

* Make each flag a string

* Some Javadoc warning fixes

* Updated javadoc fixes

* # WARNING: head commit changed in the meantime

HDFFV-11229 Fix long double usage in tools and java

Changed h5dump and h5ls to just print 128-bit for long double type.
Added test and file for dataset and attributes with all three float
types.

* Committing clang-format changes

* HDFFV-11229 Add release note

* HDFFV-11229 windows testfile needed

* fix typo

* Remove non supported message text

* HDFFV-11229 - change ldouble test to check both native and general

* HDFFV-11229 add second file compare

* HDFFV-11229 fix reference file

* HDFFV-11229 autotools check two refs

* HDFFV-11229 revert back to removal of NATIVE_LDOUBLE in tools output

* Committing clang-format changes

* Update release note

* Update attribute type of ref file

* Change source of ninja for macs

* try port instead of brew

* Recommended is to use brew.

* Undo non long double changes

* remove unneeded file

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-04-15 07:59:01 -05:00
Allen Byrne
d0444d4f2b [svn-r29261] HDFFV-9241: Print fill value as "DEFAULT" instead of value 0 2016-03-03 10:27:48 -05:00
Allen Byrne
fb762aa6b0 [svn-r21953] HDDFV-7560: h5dump refactoring
Tested: local linux
2012-02-17 16:41:58 -05:00
Jonathan Kim
a558128a18 [svn-r20869] Purpose:
HDFFV-7514 - GMQS: h5dump - improve effectiveness of testing scripts for handling expected output files

   Description:
       Fist phase for h5dump test update. Next phase will be for h5ls.
       This is prerequisite for 'HDFFV-7602 Tools - upgrade tools' test scripts to share test files among tools, providing framework for test file re-usability.'

   Tested:
       jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), linew (solaris-BE),  Windows (32-LE), Cmake (jam)
2011-05-19 17:51:36 -05:00
Pedro Vicente Nunes
7a5edc075a [svn-r14905] Introduced a ratio formula compression ratio = uncompressed size / compressed size
in the printing of the compression with 3 digits of precision per hdf-forum NASA developers suggestion

tested: windows, linux, solaris
2008-05-01 11:45:32 -05:00
Scot Breitenfeld
aec106e324 [svn-r14903] Undoing change committed in r14902. 2008-04-30 14:51:13 -05:00
Scot Breitenfeld
5773fd34bc [svn-r14902] Merged fortran_1_8 branch changes r14505:14901 into the trunk. New fortran wrappers added. 2008-04-30 14:23:26 -05:00
Pedro Vicente Nunes
6b41367ac6 [svn-r14892] RFC display compression ratio in h5dump
Here's the current behavior of h5dump regarding the printing of the dataset creation property list

For example

./h5dump -H -p -d filters

HDF5 "tfilters.h5" {
DATASET "deflate" {
   DATATYPE  H5T_STD_I32LE
   DATASPACE  SIMPLE { ( 20, 10 ) / ( 20, 10 ) }
   STORAGE_LAYOUT {
      CHUNKED ( 10, 5 )
      SIZE 385 
    }
   FILTERS {
      COMPRESSION DEFLATE { LEVEL 9 }
   }
   FILLVALUE {
      FILL_TIME H5D_FILL_TIME_IFSET
      VALUE  0
   }
   ALLOCATION_TIME {
      H5D_ALLOC_TIME_INCR
   }
}
}


The proposed behavior is to add this information after SIZE

SIZE 385 (51.9%COMPRESSION)

That percentage is obtained trough

Per = (b-a) / a

Where a = theoretical size obtained by multiplying datum size times number of elements
b =  size obtained with H5Dget_storage_size

The final print would look like

HDF5 "tfilters.h5" {
DATASET "deflate" {
   DATATYPE  H5T_STD_I32LE
   DATASPACE  SIMPLE { ( 20, 10 ) / ( 20, 10 ) }
   STORAGE_LAYOUT {
      CHUNKED ( 10, 5 )
      SIZE 385 (51.9%COMPRESSION)
    }
   FILTERS {
      COMPRESSION DEFLATE { LEVEL 9 }
   }
   FILLVALUE {
      FILL_TIME H5D_FILL_TIME_IFSET
      VALUE  0
   }
   ALLOCATION_TIME {
      H5D_ALLOC_TIME_INCR
   }
}
}

tested: windows, linux, solaris
2008-04-29 13:02:05 -05:00
Pedro Vicente Nunes
cd25a7690a [svn-r12171] Purpose:
bug fixes

Description:
h5dump/h5ls were not displaying long doubles correctly

Solution:
1) the print datatype functions were incorrectly testing for the valid return value from H5Tequal,
   (TRUE), causing the display of an incorrect name of a dataype in error cases from H5Tequal
2) h5tools_print_str did not have a case for native long double
3) added a file generator for a long double dataset
4) added one script test for the long double data (commented , some sytems don't have a native long double match, and the output differs)
5) added a vms file and h5dump script test


Platforms tested:
linux 32, 64
solaris
AIX

Misc. update:
2006-03-28 16:25:10 -05:00
Robert E. McGrath
caff5c341a [svn-r9991] Purpose:
Feature

Description:
dumper support for nbit

Solution:

Platforms tested:

Misc. update:
2005-02-11 14:04:22 -05:00