1288 Commits

Author SHA1 Message Date
Binh-Minh Ribler
43158f3bb3 Merge pull request #833 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cpp3:develop to develop
Update for new support website.

* commit '801191b4c374adc462345f2c068f1cfc6f4adf97':
  Upated cpp doc.
  Added C++ wrappers - HDFFV-10149 Description:     Added the following wrappers to class H5::Group:     + H5Lcreate_soft:         // Creates a soft link from link_name to target_name.         void newLink(const char *target_name, const char *link_name,...)         void newLink(const H5std_string& target_name,...)
  Update for new support website Description:     - Replaced external links with text including the C API name     - Removed links of copyright at the bottom of each page     - Removed logo at top     - Removed document name and version number Platforms tested:     Linux/32 2.6 (jam) - only documentation
2018-03-09 21:40:26 -06:00
Binh-Minh Ribler
801191b4c3 Upated cpp doc. 2018-03-09 21:38:59 -06:00
Binh-Minh Ribler
539f4691fa Added C++ wrappers - HDFFV-10149
Description:
    Added the following wrappers to class H5::Group:
    + H5Lcreate_soft:
        // Creates a soft link from link_name to target_name.
        void newLink(const char *target_name, const char *link_name,...)
        void newLink(const H5std_string& target_name,...)

    + H5Lcreate_hard:
        // Creates a hard link from new_name to curr_name.
        void newLink(const char *curr_name, const Group& new_loc,...)
        void newLink(const H5std_string& curr_name, const Group& new_loc,...)

        // Creates a hard link from new_name to curr_name in same location.
        void newLink(const char *curr_name, const hid_t same_loc,...)
        void newLink(const H5std_string& curr_name, const hid_t same_loc,...)

    + H5Lcopy:
        // Copy an object from a group of file to another.
        void copyLink(const char *src_name, const Group& dst,...)
        void copyLink(const H5std_string& src_name, const Group& dst,...)

        // Copy an object from a group of file to the same location.
        void copyLink(const char *src_name, const char *dst_name,...)
        void copyLink(const H5std_string& src_name,...)

    + H5Lmove:
        // Rename an object in a group or file to a new location.
        void moveLink(const char* src_name, const Group& dst,...)
        void moveLink(const H5std_string& src_name, const Group& dst,...)

        // Rename an object in a group or file to the same location.
        void moveLink(const char* src_name, const char* dst_name,...)
        void moveLink(const H5std_string& src_name,...)
Platforms tested:
    Linux/64 (jelly)
    Linux/ppc64 (ostrich)
    Darwin (osx1010test)
2018-03-09 21:29:28 -06:00
M. Scot Breitenfeld
a5d95ec083 Merge branch 'develop' into hdf5_1_10_merge 2018-03-09 16:57:54 -06:00
Allen Byrne
24c62ba7fe Change CMake min to 3.10 2018-03-09 12:32:06 -06:00
Allen Byrne
13f5388149 HDFFV-4359 Add HL C++ and fix install parameters 2018-03-08 16:39:35 -06:00
Allen Byrne
3712738877 HDFFV-4359 Add C,HL,CXX files 2018-03-08 15:54:40 -06:00
Allen Byrne
d4e7beb9ee Incr CMake min, add missing test, rework test CMake script 2018-02-27 16:39:10 -06:00
Allen Byrne
b36bad53d9 Inc CMake min, Add new tests, rework test CMake files 2018-02-27 12:57:07 -06:00
hdftest
fa3a845d49 Snapshot version 1.10 release 2 (snap9) 2018-02-11 15:54:22 -06:00
Allen Byrne
16e649fa0d HDFFV-10398 merge from develop improve CMake code 2018-01-30 16:30:17 -06:00
Allen Byrne
2f18da435e HDFFV-10398 use the simpler add_subdirectory signature 2018-01-30 12:21:01 -06:00
Allen Byrne
233afe3b6f HDFFV-10385,10392,10393 merge from develop 2018-01-22 11:22:27 -06:00
Allen Byrne
6ca95c512a HDFFV-10385 rework java names 2018-01-17 10:27:00 -06:00
hdftest
9b059d7b28 Snapshot version 1.10 release 2 (snap8) 2018-01-07 22:34:20 -06:00
hdftest
7efa31d45e Merging in latest from upstream (HDFFV/hdf5:refs/heads/hdf5_1_10)
* commit 'efa2a470c9d8cf2d584f6b22f5b80cd6687887d0': (36 commits)
  Merge fix
  HDFFV-9724 1_10 branch has a different number
  HDFFV-9724 Merge vds prefix from develop
  reverted changes from sync
  Snapshot version 1.11 release 1
  Fix valgrind issues
  HDFFV-9724 init var to null
  HDFFV-9724 add valgrind ENV
  Fix memory leak due to addition of FORMAT check loop
  HDFFV-9724 prefix of 0 length should be null value
  HDFFV-9724 Corrected files and verified tests
  Add library INTERFACE and MPI to tools
  Increase maximum number of retries for h5watch tests.
  Revert "Merge pull request #826 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop"
  Fix library interface commands, add missing JNI
  Add HD prefix
  HDFFV-9724 Remove VDS file cache functionality
  Removed incorrect MPI text
  Par example needs to link with mpi libs
  Because of MPI requirements in library ALWAYS add include path
  ...
2018-01-06 16:56:57 -06:00
hdftest
bee148a995 Snapshot version 1.11 release 2 2018-01-05 10:09:10 -06:00
hdftest
d01ad2a94a Snapshot version 1.11 release 1 2018-01-05 08:50:10 -06:00
hdftest
2f7e94c9c0 Snapshot version 1.10 release 2 (snap7) 2017-12-31 10:42:57 -06:00
Allen Byrne
732074d47e Add library INTERFACE and MPI to tools 2017-12-28 16:30:51 -06:00
hdftest
98bf60f722 Snapshot version 1.10 release 2 (snap6) 2017-12-24 15:28:56 -06:00
Allen Byrne
1efe978ae0 Fix library interface commands, add missing JNI 2017-12-21 13:48:49 -06:00
Binh-Minh Ribler
82d092a499 Update for new support website
Description:
    - Replaced external links with text including the C API name
    - Removed links of copyright at the bottom of each page
    - Removed logo at top
    - Removed document name and version number
Platforms tested:
    Linux/32 2.6 (jam) - only documentation
2017-12-20 23:11:58 -06:00
hdftest
36b9818ecc Snapshot version 1.10 release 2 (snap5) 2017-12-17 15:33:36 -06:00
M. Scot Breitenfeld
4f37d8e538 Merge branch 'develop' into hdf5_1_10 2017-12-12 16:09:19 -06:00
hdftest
ad85e417cf Snapshot version 1.10 release 2 (snap4) 2017-12-11 08:58:41 -06:00
Binh-Minh Ribler
17d148434f Fixed typo. 2017-12-04 16:57:37 -06:00
Binh-Minh Ribler
e33d677636 Various code cleanup
Description:
    - Replaced H5Location::exists with H5Location::nameExists and marked
      H5Location::exists as deprecated.
    - Miscellaneous test cleanup for consistency.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (jelly)
    Darwin (osx1010test)
2017-12-04 12:21:12 -06:00
hdftest
9dd1abc0d8 Snapshot version 1.10 release 2 (snap3) 2017-11-20 10:40:33 -06:00
M. Scot Breitenfeld
59e7c7703e Merge branch 'develop' into hdf5_1_10 2017-10-26 10:13:33 -05:00
HDF Tester
b80fe75b7f Snapshot version 1.10 release 2 (snap2) 2017-10-16 16:50:31 -05:00
Binh-Minh Ribler
27a0c46ec6 Updated doxygen config file
Description:
    Added C2Cppfunction_map.mht to HTML_EXTRA_FILES.
    Verified that the file is copied to cpplus_RM after running doxygen
        on cpp_doc_config.
2017-10-03 08:53:04 -05:00
Binh-Minh Ribler
31ec370f4d Fixed typos for document file. 2017-09-25 13:20:41 -05:00
Binh-Minh Ribler
924421f298 Added documentation file
Description:
    Added a single page html file, C2Cppfunction_map.mht, that shows
    the current mapping of C APIs to C++ member functions.  This page
    can be reached from the main page of the C++ reference manual.
2017-09-17 13:28:42 -05:00
Binh-Minh Ribler
92193e35bb Miscellaneous code cleanup
Description:
    - Removed two inadvertently-added Group constructors in the header file.
      There was no implementation.
    - Removed deprecated H5Location and H5Object constructors that take an
      existing ID.
    - Miscellaneous improvements in comments, including updating URLs.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (jelly)
    Darwin (osx1010test)
2017-09-15 11:46:22 -05:00
Binh-Minh Ribler
5cf381597d Fixed incorrect calls
Description:
    Replaced the calls to the deprecated function printError with
    printErrorStack in examples.
Platforms tested:
    Linux/32 2.6 (jam)
2017-09-14 14:33:40 -05:00
Binh-Minh Ribler
c7b27a7674 New overloaded functions and tests
Description:
    - Added VarLenType::VarLenType(const DataType& base_type)
    - Marked VarLenType::VarLenType(const DataType* base_type) deprecated
    - Added a static wrapper for H5Tdetect_class for PredType
        static bool DataType::detectClass(const PredType& pred_type, ...)
    - Removed the deprecated function Exception::printError() from code
    - Miscellaneous improvements in comments
    - Added test functions test_detect_type_class() and test_vltype()
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (jelly)
    Darwin (osx1010test)
2017-09-12 14:46:06 -05:00
Binh-Minh Ribler
47a2d5e48f Adding variable initialization
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2017-09-07 10:12:43 -05:00
Binh-Minh Ribler
9b6f4d4937 Adding new C++ wrappers
Description:
    Added wrappers for H5Tencode to class DataType and H5Tdecode to
    classes DataType and its subclasses.

        // Creates a binary object description of this datatype.
        void DataType::encode()

        // Returns the decoded type from the binary object description.
        virtual DataType* DataType::decode() const;
        virtual DataType* ArrayType::decode() const;
        virtual DataType* CompType::decode() const;
        virtual DataType* DataType::decode() const;
        virtual DataType* EnumType::decode() const;
        virtual DataType* FloatType::decode() const;
        virtual DataType* IntType::decode() const;
        virtual DataType* StrType::decode() const;
        virtual DataType* VarLenType::decode() const;

Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2017-09-04 00:41:47 -05:00
Binh-Minh Ribler
883a235d5c Miscellaneous improvements (cont.)
Description:
    Put back H5Location::getNumObjs and marked as deprecated in favor of
    Group::getNumObjs.
Platforms tested:
    Linux/32 2.6 (jam)
    Darwin (osx1010test)
2017-08-25 12:07:04 -05:00
Binh-Minh Ribler
0e44181bbb Miscellaneous improvements
Description:
    Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info)
    Switched reinterpret_cast to static_cast in H5Object::iterateAttrs
    Miscellaneous cleanup
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2017-08-24 13:46:39 -05:00
hdftest
1015828c1f Snapshot version 1.10 release 2 (snap1) 2017-08-08 23:31:21 -05:00
hdftest
d3b8037137 Snapshot 1.10.2-snap1
(Committed 8/1/2017 but not pushed from fork)
2017-08-04 15:49:04 -05:00
Dana Robinson
76b9a0e7ef * Reverted removal of H5I_REFERENCE to avoid breaking binary
compatibility.
* Added a quick H5I_REFERENCE smoke check to test_misc19()
  in tmisc.c.
2017-07-03 12:54:14 -07:00
Dana Robinson
0d6930d3c2 Purged the unused H5I_REFERENCE from the library. 2017-06-30 20:53:56 -07:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
lrknox
49cded79ce Add new files in release_docs to MANIFEST.
Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running
autogen.sh.

Conflicts:
	README.txt
	c++/src/Makefile.in
	fortran/src/Makefile.in
	hl/c++/src/Makefile.in
	hl/fortran/src/Makefile.in
	hl/src/Makefile.in
	java/src/jni/Makefile.in
	release_docs/RELEASE.txt
	src/Makefile.in
2017-04-15 08:17:10 -05:00
lrknox
b9a27fddaa Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
* commit '0d05cb607e5951f3a28a101be56ca194022a7fa1':
  Reverted addition of The HDF Group copyright headers to 3rd party CMake files for Java.
  Add Copyright headers to 90 files (mostly .cmake files) without Copyright headers.
  Add "Copyright by The HDF Group."" to copyright header.
2017-04-14 16:40:52 -05:00
lrknox
25ec07450a Change copyright headers to replace url referring to file to be removed
and replace it with new url for COPYING file.

Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
2017-04-14 11:54:16 -05:00
lrknox
972344e231 Merge bin/h5vers changes from develop.
Pull version from configure for version test in h5repack_plugin.sh.in
Update version to 1.10.2-snap0 for hdf5_1_10 branch.
2017-03-23 20:03:27 -05:00