h5repack new features
Description:
implemented some features of h5repack , mostly borrowed from hrepack
like
1) the parsing of options
2) building a list of options
3) printing formats
added a test program that generates files and calls h5diff to compare
the input and output files
Platforms tested:
Misc. update:
h5diff maitainance
Description:
separated the h5diff source between several modules
there is a public module with a new function "h5diff" that can be called by an application
program (h5repack will use it )
added a new verbose option that can turn off all printf
Platforms tested:
linux
solaris
IRIX
Misc. update:
Code cleanup
Description:
Change field member count and indices for compound and enumerated types from
'int' to 'unsigned' to better reflect actual use.
Cleaned up a few other minor compiler warnings, etc.
Platforms tested:
FreeBSD 4.9 (sleipnir)
Linux 2.4 (verbena)
too minor to require h5committest
Code Improvement
Description:
Changed from passing a structure into a function by value into
passing it in by pointer. Noticed this while compiling with a highly
optimizing compiler which took >30 minutes to analyze the program
(granted, this is the compiler's fault, but in general, it's better
to pass large structures in by pointer and not by value).
Platforms tested:
Linux (specific to h5import, so only needed to test on one platform)
Misc. update:
Bug fixes and code cleanup
Description:
Corrected output of array separator when vlen separator was needed.
datatypes.
Parts of formatting cleanup to greatly reduce the amount of trailing
whitespace emitted in output.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
Bug fixes and code cleanup
Description:
Changes to h5dump code:
- Dump shared datatypes for any class of datatype, not just compound
datatypes.
- Cleaned up formatting to greatly reduce the amount of trailing
whitespace emitted in output. Also removed some spurious blank
lines from named datatype output.
Added code to generate named datatype attribute test file.
Added tests for dumping named datatypes in attributes for both DDL and
XML output.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
Code cleanup
Description:
Clean up a few loose ends and warnings for the 1.6 compatibility changes
to the error API.
Platforms tested:
FreeBSD 4.9 (sleipnir)
too minor to require h5committest
bug fix
Description:
h5diff would incur a segmentation fault in Alpha clusters when
the percentage option is used. This was due to memory aliagment
issue when the options variable is declared as a local variable
in main().
Moved the declaration to a global declaration.
Platforms tested:
"h5committested"
And tested at cluster QT of SNL.
Misc. update:
Code cleanup
Description:
Remove various "fixtype" routines which duplicate (and actually pre-date)
the functionality in H5Tget_native_type in favor of having the tools call
H5Tget_native_type(). This provides the same functionality (actually better
functionality, since the old "fixtype" routines didn't handle alignment of
compound fields correctly) and reduces the amount of code to maintain.
Add additional tests to dump out a "complex" compound datatype which
exercises more code in the library for aligning compound fields correctly.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Updated the copyright notice--mostly by rearranging
some text to make them consistent.
Solution:
Platforms tested:
"h5committested"--sol is down, so, no SUn test.
Misc. update:
Bug fix
Description:
Object references were not getting written out correctly to the file, with
recent changes to their memory structure.
Solution:
Convert the object references correctly.
Platforms tested:
h5committested
Code cleanup
Description:
Remove recent changes which duplicated code from config/conclude.in, now
that the output of XML schema XID's is portable.
Platforms tested:
h5committested
Refactored code
Description:
Chased 'objno' and 'fileno' changes in H5G_stat_t structure, including
updating the addresses displayed.
Platforms tested:
h5committested
Code cleanups & bug fixes
Description:
Lots of changes to chase 'objno' and 'fileno' changes in H5G_stat_t struct,
including changing the output of object IDs from "<number>:<number>" to just
"<number>".
Same change to XML schema XIDs from "xid_<number>-<number>" to just
"xid_<number>"
Cleaned up a number of memory leaks
Use the H5_PRINTF_HADDR_FMT macro for printing 'haddr_t's
Platforms tested:
h5committested
Refactored code
Description:
Added 'unsigned flags[2]' field and changed 'objno' field from 'unsigned
long[2]' to 'haddr_t' (to reflect changes in H5G_stat_t)
Platforms tested:
h5committested
Refactored code
Description:
Use H5E_BEGIN_TRY/H5E_END_TRY macros around blocks where errors shouldn't
be printed, instead of managing 'automatic error' information.
Use new 'flags' field in table objects where appropriate
Chase changes to 'fileno' and 'objno' fields of H5G_stat_t
Platforms tested:
h5committested
Code cleanup & refactoring
Description:
Use H5E_BEGIN_TRY/H5E_END_TRY macros around blocks where errors shouldn't
be printed, instead of managing 'automatic error' information.
Changes to use new 'flags' fields in the table of objects, since the 'objno'
field can't be [ab]used any longer.
Platforms tested:
h5committested
Code cleanup
Description:
Use H5E_BEGIN_TRY/H5E_END_TRY macros around code which shouldn't display
the error stack on failure, instead of setting and resetting the automatic
error printing routines.
Platforms tested:
h5committested
bug fix
Description:
1. function rindex is not recognized by windows. Using strrchr instead.
Thereafer strings.h is not necessary.
2. Variable p_type is defined as "hid_t" type at one function; but it is never used.
At the end of that function, H5Tclose(p_type) is assigned. It may cause problems.
So erase two lines.
Solution:
See above
Platforms tested:
windows 2000, linux 2.4, sol 2.7, AIX 5.1.
Misc. update:
Bug Fix
Description:
pmake failed during make of h5dump because of some undefined
variables.
Solution:
Defined the variables.
Platforms tested:
Modi4 (small change and only Irix specific)
Misc. update:
This is an omibus update to the h5dump program.
1. Fixes bug 888
2. updates XML output to 1.6
Description:
Solution:
Platforms tested:
verbena, arabica, copper (64)
Misc. update:
MANIFEST updated
Need to do release notes.
bug fix
Description:
if the user incorrectly put the option -n20 (instead of -n 20) as the last argument
h5diff tried to parse the 20 as an extra argument, causing a failure
if ('-' !=argv[i+1][0] )
Solution:
add an extra test for the case that option is the last argument
if ( i<argc-1 && '-' !=argv[i+1][0] )
Platforms tested:
linux . this is too trivial for all platforms test
Misc. update:
Purpose:
Bug Fix
Description:
LIBTOOLS macro was being used but not defined.
Solution:
Removed the LIBTOOLS macro as it wasn't necessary
Platforms tested:
Modi4 (small fix)
Misc. update:
Bug Fix
Description:
The SUBDIRS macro is now defined as "" in the config/commence.in
file. We shouldn't have definitions of this macro before the
inclusion of config/commence.in.
Solution:
Placed all definitions of SUBDIRS after config/commence.in inclusion.
Platforms tested:
Modi4 (Small fix yet again).
Misc. update:
Purpose:
Bug Fix
Description:
Changes needed to make "pmake" work on Modi4.
Solution:
Needed to add some null macro defines in the commence.in files.
Needed to remove a dependence on LIBH5TEST in the fortran make
since LIBH5TEST isn't used in the fortran stuff.
Platforms tested:
Modi4 (small change)
Misc. update:
Description: H5Tget_native_type fails for multiple kinds of datatype on Cray; it fails
fix-length string type, too.
Platforms tested: Cray, h5committest
Bug fix
Description:
h5cc was removed prematurely in "make clean". Moved it to be
removed in "make distclean" only.
Solution:
Platforms tested:
COpper.
Misc. update:
Bug fix/new feature
Description:
Teach h5dump/h5ls to display variable-length datatypes correctly.
Change "raw byte" output of array elements from "0xde8141b1a818" to
"de:81:41:b1:a8:18" so that it's easier for users to read.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Misc. update:
Patch provided by Robb Matzke (matzke@llnl.gov)
Bug fix
Description:
The output from the modification time is highly system dependent, so
remove it from the h5ls output before comparing file with diff.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Bug fix
Description:
The output from the modification time is highly system dependent, so
remove it from the h5ls output before comparing file with diff.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
