Commit Graph

116 Commits

Author SHA1 Message Date
Vailin Choi
b178d80be0 Changes made based on feedback from pull request #1039. 2018-05-14 12:26:48 -05:00
Vailin Choi
e6bc326ec0 Fix for HDFFV-10180 Performance issues with H5Oget_info. 2018-04-24 15:10:13 -05:00
Allen Byrne
8e2cedd066 HDFFV-10297 Cleanup, Initialize variables 2017-10-23 09:26:15 -05:00
Dana Robinson
ee7816bbfb Stripped C standard library headers (and a couple of macros)
from the tools code. This is all handled in H5private.h, which
should be included in all tools source files.
2017-07-17 13:24:01 -05:00
Dana Robinson
291b107d4d Minor warning fixes in the tools. 2017-05-25 09:47:20 -04:00
Allen Byrne
e4e261173f HDFFV-10186 more whitespace formatting 2017-05-10 10:12:19 -05:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Quincey Koziol
57afb68e46 Bring SWMR-related tools changes from revise_chunks to develop. 2016-12-11 11:25:08 -08:00
Dana Robinson
122819fec3 Merge pull request #48 in HDFFV/hdf5 from HDFFV-9407-h5dump-fails-to-print-full-precision to develop
Merged Kimmy's fix (still needs a test).

* commit 'f76c3b56e1ccf81b16225fa6935adb45ac6d2f38':
  fix the issue of h5dump fails to print full precision
2016-12-07 16:17:45 -06:00
Quincey Koziol
bb6cb6adb0 Code style and warning cleanups, from revise_chunks branch. 2016-11-06 12:08:19 -08:00
kmu
f76c3b56e1 fix the issue of h5dump fails to print full precision 2016-09-27 14:04:19 -05:00
Quincey Koziol
83724bd787 [svn-r30113] Description:
Clean up warnings (from 2774 -> 1560, with my standard debug build)

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-06-28 16:53:48 -05:00
Dana Robinson
5a9a9e8f0e [svn-r29534] Normalization w/ revise_chunks in preparation for big merge.
tools directory

Also fixes a minor Java test output error.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial w/ Java, Fortran, & C++
2016-03-23 12:42:06 -05:00
Quincey Koziol
d3c6b4ad72 [svn-r27848] Description:
Clean up warnings and some normalization against trunk.

Tested:
    McaOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest not required on this branch)
2015-09-21 19:21:18 -05:00
Quincey Koziol
2c91cbecc6 [svn-r27630] Description:
Bring in changes from the trunk, through r27628.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial
    (h5committest not required on this branch)
2015-08-31 15:14:57 -05:00
Dana Robinson
c226e58005 [svn-r27626] Various minor warning fixes before major SWMR and VDS merges.
gcc 4.9.2 was used to create the warning list

- implicit casts
- shadowed variables
- various enum issues
- other minor fixes (comments, unused macros, etc.)

Tested on: h5committest
2015-08-31 14:04:23 -05:00
Neil Fortner
c365b9a59f [svn-r27593] Merge revisions 27453 through 27592 from trunk to vds branch.
Tested: ummon
2015-08-27 12:06:54 -05:00
Dana Robinson
2e6100fb23 [svn-r27572] Removed VMS-specific code from the library.
The only remaining code consists of a few floating-point tests
that rely on pre-generated and checked-in VMS files. These have
been left alone, even though they will not be possible to
recreate, since testing VMS float behavior is still important.

Tested on: h5committest
2015-08-24 15:19:39 -05:00
Allen Byrne
48e1bbb0f8 [svn-r27252] Fix whitespace 2015-06-19 10:57:38 -05:00
Allen Byrne
7fdb38eb6f [svn-r27239] Add function prototype for local function 2015-06-18 08:52:52 -05:00
Allen Byrne
cf7c5123cb [svn-r27238] Add function prototype for local function 2015-06-18 08:52:35 -05:00
Allen Byrne
26e709edc6 [svn-r26794] Fix formatting for selection. Irregular reuses blocks and points for datasets however indentation after line breaks are an issue. 2015-04-13 15:15:00 -05:00
Neil Fortner
6a27582a44 [svn-r26781] Merge revisions 26305 through 26780 from trunk to vds branch.
Tested: ummon
2015-04-10 18:00:48 -05:00
Quincey Koziol
6f75afd15e [svn-r26635] Description:
Bring r26651 from autotools_rework branch to trunk:

    Remove the VSNPRINTF_WORKS macro, it's working around bugs in old SGI
& HP compilers.

Tested on:
    Linux/32 2.6.18 (jam) w/serial & parallel
    (Daily tested on branch for 2+ days)
2015-03-27 19:37:08 -05:00
Allen Byrne
4edde43ae5 [svn-r26440] Added new structure, removed ";", used static hyperslab arrays. 2015-03-12 16:22:48 -05:00
Dana Robinson
7659506fa8 [svn-r26438] Fixed some double promotion warnings from gcc 4.9.2. Most were in
format strings.

Tested on: h5committest
2015-03-11 17:51:14 -05:00
Allen Byrne
b3c3c8ea72 [svn-r26361] Added check for unlimited to count/block print selection 2015-03-04 14:14:50 -05:00
Allen Byrne
f1c4d0ff3f [svn-r26352] Update h5dump to latest BNF - reg vs irreg hyperslabs. 2015-03-04 08:34:24 -05:00
Allen Byrne
45df14138d [svn-r26318] Update virtual layout to latest changes 2015-02-26 10:59:15 -05:00
Elena Pourmal
99a3f4d8d4 [svn-r26297] Changed example and h5dump according to suggestions at today's code review VDS-176.
BNF has been updated too. Now h5dump displays VDS like this:

HDF5 "vds.h5" {
GROUP "/" {
   DATASET "VDS" {
      DATATYPE  H5T_STD_I32LE
      DATASPACE  SIMPLE { ( 4, 6 ) / ( 4, 6 ) }
      STORAGE_LAYOUT {
         VIRTUAL {
             HYPERSLAB { (0,0)-(0,5) };
             a.h5;
             A;
             ALL;
             HYPERSLAB { (1,0)-(1,5) };
             b.h5;
             B;
             ALL;
             HYPERSLAB { (2,0)-(2,5) };
             c.h5;
             C;
             ALL;
            }
         }
      }
      FILTERS {
.......
I just commented the code with "EIP" and didn't delete to simplify the review with Allen tomorrow.

Tested on jam
2015-02-24 23:19:41 -05:00
Allen Byrne
b1251c915e [svn-r26287] Rename point and block str functions generically.
Add info arg to print virtual selection function.
2015-02-23 15:23:56 -05:00
Dana Robinson
d01ee66666 [svn-r24937] Adds an H5free_memory() function to the library for use with
functions that return library-allocated memory. The test and tool
code were modified to use this new function where it's appropriate.

Fixes HDFFV-7710, HDFFV-8519, and HDFFV-8551

Tested on:
    64-bit Windows 7 w/ VS2012
    32-bit LE linux w/ parallel and fortran (jam)
    32-bit LE linux w/ fortran and C++ (jam)
2014-03-31 18:35:09 -05:00
Larry Knox
06aa7b6641 [svn-r24285] Eliminate several "passing argument ... with different width due to prototype" warnings by casting constants to size_t where expected by string functions.
Tested on jam, koala,ostrich and platypus with h5committest.
2013-10-10 16:57:04 -05:00
Allen Byrne
125e2a0a9d [svn-r23800] Added the HD prefix to the system functions used in the h5tools_str_replace function. 2013-06-20 17:02:17 -05:00
Allen Byrne
60cce86d0e [svn-r23796] remove commented line with c++ style 2013-06-20 10:06:14 -05:00
Allen Byrne
aff5c20a6a [svn-r23305] HDFFV-8257: szip still used even if headers are not found. Change configure to test the result of the CHECK HEADERS call before checking for the library.
Tested: local linux, h5committest
2013-02-18 15:56:21 -05:00
Allen Byrne
dd27fe612c [svn-r22602] 2012-07-25 17:17:48 -05:00
Peter Cao
57295db6c7 [svn-r22054] Use HDmalloc/free. 2012-03-12 16:53:24 -05:00
Peter Cao
fcf96afeb2 [svn-r22052] - h5dump: Added capability for "-a" option to show attributes containing "/"
by using an escape character. For example, for a dataset "/dset" 
               containing attribute "speed(m/h)", use "h5dump -a "/dset/speed(\/h)" 
               to show the content of the attribute. See details at HDFFV-7523
2012-03-12 16:27:11 -05:00
Allen Byrne
f99cdd5afe [svn-r22019] Cleanup warnings from compiles
Tested: local linux
2012-03-02 16:30:30 -05:00
Allen Byrne
944f2cdf8d [svn-r21979] Correct HD prefix in tools for strlen and memcpy
Checked for HD support.
2012-02-24 09:27:57 -05:00
Allen Byrne
0b4463911f [svn-r21974] Update HSIZE_T print statements to use correct macro.
Fix some more HD prefix issues in tools.

Tested: local linux
2012-02-23 14:08:09 -05:00
Allen Byrne
9974e02bc0 [svn-r21973] Correct limited reallocation on windows.
Tested: local linux, windows, h5committest
2012-02-23 12:45:46 -05:00
Allen Byrne
bd11f8643d [svn-r21970] Added missing HD prefix 2012-02-22 17:03:07 -05:00
Allen Byrne
6ef73c4282 [svn-r21968] Added missing HD prefix 2012-02-22 16:40:23 -05:00
Allen Byrne
fb762aa6b0 [svn-r21953] HDDFV-7560: h5dump refactoring
Tested: local linux
2012-02-17 16:41:58 -05:00
Raymond Lu
64b1807783 [svn-r21378] The tools used "%hhd" to print signed char. But VMS doesn't know it. So I used H5_VMS to have a different way ("%hd") to print it.
Tested on jam.  Not tested on VMS yet.  Simple change.
2011-09-13 10:45:34 -05:00
Raymond Lu
d08f89f07d [svn-r21354] Issue 7674 - CLANG compiler complained about the line (about 800):
tempint = (tempint >> packed_data_offset) & packed_data_mask;
The right shift may cause undefined behavior if PACKED_DATA_OFFSET is 
32-bit or more. For every kind of native integers, I changed the code 
to make it zero if PACKED_DATA_OFFSET is greater than or equal to the
size of integer.

Tested on Mac OS Lion with CLANG compiler and jam, koala, and linew.
2011-09-01 15:51:43 -05:00
Quincey Koziol
a777619a6b [svn-r21121] Description:
Switch from H5P_DATASET_ACCESS_DEFAULT to H5P_DEFAULT for calls to
H5Rdereference2().

Tested on:
    Mac OS X/32 10.6.8 (amazon) w/debug
    (too minor to require h5committest)
2011-07-18 18:12:28 -05:00
Raymond Lu
304f19d730 [svn-r21117] Issue 2763 - I added a new parameter of object access property list to the function H5Rdereference. It's called H5Rdereference2 now. H5Rdereference function has been deprecated to H5Rdereference1. I also added some test cases in trefer.c.
Tested on jam, heiwa, and koala.
2011-07-18 16:23:02 -05:00