mirror/hdf5
2
0
Fork 0
mirror of https://github.com/HDFGroup/hdf5.git synced 2024-11-27 02:10:55 +08:00
Code Issues Packages Projects Releases Wiki Activity
15,711 Commits 89 Branches 144 Tags 733 MiB
aee8233f16
Commit Graph

1268 Commits

Author SHA1 Message Date
Allen Byrne
016ebfcdf2 [svn-r29198] Remove if condition for test mask situation 2016-02-24 09:55:14 -05:00
Allen Byrne
f74042d4e8 [svn-r29190] Add checking for *.err file before trying to read 2016-02-23 15:50:02 -05:00
Dana Robinson
b3df4e9c8d [svn-r29142] Updated the Intel files in config to use the new NO_SYMBOLS flags 
and modified the failsafe configure flags in ibm-aix to use the
new scheme.
 2016-02-17 13:15:58 -05:00
Dana Robinson
52705fa6f0 [svn-r29139] Updated PGI compiler files to set NO_SYMBOLS_CFLAGS/FCFLAGS and 
moved the -s (strip symbols) option from the production flags to the
no symbols flags.

Tested on: platypus w/ PGI 15.7 (C, C++, Fortran)
 2016-02-17 10:08:33 -05:00
Dana Robinson
d334af98c1 [svn-r29134] Updated config/solaris to use the latest configure option 
and compiler flag scheme.

Tested on: Solaris 11.1 (emu) w/ SunPro 5.12 CC/FC/CXX
           autotools serial
 2016-02-17 04:54:07 -05:00
Dana Robinson
77f2f1c132 [svn-r29131] Updated the GNU g++ compiler config file to use the new debug/ 
production, etc. system.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial - prod/debug w/ C++
 2016-02-16 21:16:27 -05:00
Dana Robinson
ad0925c214 [svn-r29129] Added NO_SYMBOLS_CFLAGS, etc. to allow stripping symbols when 
--disable-symbols is specified and to ensure that production
mode (where symbol stripping is usually a part of the FLAGS)
doesn't conflict with --enable-symbols. This will allow better
(though still limited) debugging of production/optimized code.

The PGI, XLC, Intel, and Solaris files were not modified and
do not generate the symbol removal flag at this time. They'll
be updated in future check-ins. In the meantime, production
mode on those platforms still usually strips symbols.

This check-in also updates the Cygwin-specific files to use
the new autotools FLAGS and option scheme when uncommon
(non-gnu, etc.) Fortran compilers are used.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial (prod/debug w/ and w/o symbols)
           symbol presence/absence checked with objdump
 2016-02-16 20:09:04 -05:00
Dana Robinson
e7c1236543 [svn-r29090] Changed "smart quotes" to ASCII ' and " in r28960 code. 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools parallel (MPICH 3.1.4)
           CMake serial (CMake 3.3.2)
 2016-02-11 14:37:14 -05:00
Dana Robinson
2fb4f0b35e [svn-r29023] Fixed typos in symbols flags that prevented using -g, etc. 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial autotools
 2016-02-01 14:28:38 -05:00
Dana Robinson
1454a45826 [svn-r28996] Autotools configure updates to allow separation of build type, debug 
symbols, asserts, profiling, and optimization.

Also much refactoring, improved help, and --enable-<foo> options will
now emit errors on nonsense (e.g.: --enable-foo="asdfasdf").

The libhdf5.settings.in file was also reformatted.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial and parallel autotools w/ various options
 2016-01-27 16:45:23 -05:00
Dana Robinson
7abd70b809 [svn-r28990] Removed spurious BIND() warnings from Fortran. 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial autotools w/ Fortran
 2016-01-27 14:12:38 -05:00
Dana Robinson
20a3462089 [svn-r28977] Added autotools g++ compiler flags/warnings file to config/ 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ C++
 2016-01-27 01:23:40 -05:00
Dana Robinson
8bbdc947c4 [svn-r28972] Removed option to clear file buffers from autotools, CMake, and library. 
Buffers that will be written to disk will now always be cleared since
not doing this has huge security implications.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0, x86_64) gcc 5.2.1
           serial autotools
           parallel autotools (MPICH 3.1.4)
           serial CMake
 2016-01-26 16:26:12 -05:00
Dana Robinson
8aa7c27fb7 [svn-r28963] Updated the gnu Fortran configure files to set flags when the gnu compiler 
is used. The gnu-fflags file was never included.

Tested on ostrich
 2016-01-23 19:34:29 -05:00
Larry Knox
0d714830a8 [svn-r28960] Fix for HDFFV-9439 
Escape quotes in fortran version output to find fortran version for libhdf5.settings

Tested with buildhdf5 on platypus, ostrich, moohan and mayll.
 2016-01-22 13:18:04 -05:00
Quincey Koziol
f017eb6fc0 [svn-r28777] Description: 
Add --enable-memory-alloc-sanity-check option to configure, to track and
sanity check memory allocations within the library.  This is orthogonal to the
--enable-using-memchecker option and can be used with/without it.

Tested on:
    MacOSX/64 10.11.2 (amazon) w/serial & parallel
    (h5committest forthcoming)
 2016-01-03 17:06:52 -05:00
HDF Tester
6d8b831b31 [svn-r28730] Snapshot version 1.9 release 233 2015-12-27 23:20:23 -05:00
Dana Robinson
f53c939bd0 [svn-r28581] Brought flock changes over from revise_chunks as well as a few 
minor tweaks from H5private.h.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial only, autotools and CMake (3.3.2)
 2015-12-11 03:19:10 -05:00
Dana Robinson
af371007e8 [svn-r28538] Merge of r28479 from revise_chunks. 
Fixes OS X compilation problems and brings some Linux symbols in
line with the Autotools when building with CMake.

Tested on: 64-bit OS X 10.11.1 El Capitan (Darwin 15.0.0)
           Xcode 7.1 Apple LLVM 7.0.0 (clang-700.1.76)
 2015-12-08 15:49:12 -05:00
Dana Robinson
8de50ab664 [svn-r28463] Merge of -r28460 from revise_chunks. Removes -std=c99 from 
C++ flags under CMake.

Tested on: Ubuntu 15.10 (x86_64 Linux 4.2.0)
    gcc 5.2.1, CMake 3.3.2
 2015-11-24 14:29:21 -05:00
Allen Byrne
54aa68df1a [svn-r28403] Update to include cdash submit options 2015-11-19 13:32:41 -05:00
Jerome Soumagne
7791549252 [svn-r28188] Fix inline/__inline__/__inline detection with CMake after autotools changes 2015-10-22 11:23:01 -05:00
Allen Byrne
37ed7e8b5f [svn-r28184] correct import targets 2015-10-22 10:47:29 -05:00
Allen Byrne
aa4284b2a3 [svn-r28174] HDFFV-9550: Add VS2015 fix for timezone. 2015-10-21 16:22:06 -05:00
Allen Byrne
7d34c32445 [svn-r28160] Update comment about VS versions 2015-10-21 11:28:17 -05:00
Allen Byrne
78c820b1ee [svn-r28158] Merge from CMAMKE_EXT_MOD repo. 
Add VS2015 support.
 2015-10-21 10:44:41 -05:00
Allen Byrne
83d7feb63c [svn-r28154] Correct define vs variable usage 2015-10-20 17:13:26 -05:00
Allen Byrne
6a6e921d2f [svn-r28152] Correct define vs variable usage 
Add VS2015
 2015-10-20 17:11:10 -05:00
Allen Byrne
01a198ac1b [svn-r28148] Correct define vs variable usage 2015-10-20 16:13:45 -05:00
Allen Byrne
84c4dc0039 [svn-r28147] Correct define vs variable usage 2015-10-20 16:09:27 -05:00
Allen Byrne
1bf086b080 [svn-r28145] Correct define vs variable usage 2015-10-20 16:01:07 -05:00
Jerome Soumagne
2094d86461 [svn-r28138] Add first support for _Bool and make hbool_t a "real" _Bool if available 
Fix tests accordingly and fix misuse of hbool_t in various places

Fix initialization of H5Pgcpl/ocpl structs in property decoding routines

Tested on:
    Linux/32 (jam)
    Linux/64 (platypus)
    Linux/PPC64 (ostrich)
    MacOSX/64 10.11
 2015-10-20 01:28:17 -05:00
Jerome Soumagne
a9da5b8cc5 [svn-r28131] Cleanup cmake output of HDF5UseFortran 2015-10-19 15:32:49 -05:00
Allen Byrne
eca1bd1d8b [svn-r28130] Updated scripts 2015-10-19 14:20:04 -05:00
Jerome Soumagne
0be7b0d524 [svn-r28113] A few warning fixes in cmake conversion tests 2015-10-16 17:01:51 -05:00
Jerome Soumagne
60cdc22cd3 [svn-r28112] CMake check for gettimeofday if not on windows 2015-10-16 17:01:24 -05:00
Allen Byrne
86f450c240 [svn-r28089] Need to set a variable for matching install config names. 2015-10-15 14:58:41 -05:00
Allen Byrne
58db7babe4 [svn-r27973] Update to new style usage 2015-10-06 13:48:50 -05:00
Elena Pourmal
d0babe88da [svn-r27968] Modified version number to 1.9.233 before creating a tar ball for DLS. 2015-10-06 12:03:41 -05:00
Allen Byrne
f0adeb1cdd [svn-r27937] fix case 2015-10-02 15:08:54 -05:00
Allen Byrne
af5c2697a1 [svn-r27933] Cmake 3.3 allowed execute_process to merge output and error files if the filename or the variable were the same. 
Changed instances to make the outpu_variable different.
 2015-10-02 12:55:08 -05:00
Allen Byrne
e8073c0d80 [svn-r27910] Rework flex-bison generated files to eliminate dual depends when building both shared and static 2015-09-29 12:23:55 -05:00
Allen Byrne
179d122d59 [svn-r27904] Correct missing target name chars 2015-09-28 15:43:25 -05:00
Allen Byrne
431c69474c [svn-r27903] Add extra line for replacement from revision 27898 2015-09-28 15:23:46 -05:00
Allen Byrne
ccd6248532 [svn-r27895] Rework the generated file dependencies and commands. 2015-09-28 12:30:48 -05:00
Allen Byrne
5430c32938 [svn-r27873] Update with changes to script file 2015-09-24 14:01:39 -05:00
Allen Byrne
a1df19353d [svn-r27871] Update with changes to script file 2015-09-24 13:54:00 -05:00
Allen Byrne
e732b8073b [svn-r27869] Update with changes to script file 2015-09-24 12:36:48 -05:00
Allen Byrne
6a2195507d [svn-r27863] Correct comment 2015-09-23 15:34:23 -05:00
Allen Byrne
0d752fc354 [svn-r27862] Make the system vars configurable through the CTEST_SCRIPT_ARG 2015-09-23 15:31:50 -05:00
Allen Byrne
9edd184ae9 [svn-r27846] Fix generated files process. 
Add script for post processing of flex/bison files.
 2015-09-21 15:05:23 -05:00
Allen Byrne
87005a24ba [svn-r27823] Add new options for dynamic analysis 2015-09-18 10:23:20 -05:00
Dana Robinson
9af344117c [svn-r27794] Reintegration merge of features/autotools_rework branch with trunk 
NOTES:

- Developers will have to run autogen.sh before building with the autotools.

- autogen.sh takes the -p option to mimic the old bin/reconfigure behavior.

- The generated error, overflow and version headers have been left in place.

- The generated H5LT parser code has also been left in place.

- There are no changes for CMake users at this time.

Tested on: h5committest
 2015-09-15 15:38:57 -05:00
Dana Robinson
1177e64925 [svn-r27787] Merge of r27632-27674 from the trunk. 
Tested on: h5committest
 2015-09-15 08:01:01 -05:00
HDF Tester
f16361d5f1 [svn-r27767] Snapshot version 1.9 release 231 2015-09-13 19:43:47 -05:00
Dana Robinson
1ac1dfb40f [svn-r27755] Changed direct VFD default to OFF in CMake to match Autotools. 
Tested on: jam w/ CMake
 2015-09-10 22:03:41 -05:00
Dana Robinson
95e0bd109f [svn-r27752] Merge of r27751 from 1.8 branch 
Added a comment to config/ibm-flags that describes the purpose of the
-qflag=w:w compiler flag.

Tested on: N/A (no access to AIX, comment only)
 2015-09-10 15:36:08 -05:00
Allen Byrne
10da31a926 [svn-r27745] Merge trunk revision 27744 2015-09-10 09:11:17 -05:00
Dana Robinson
897b7308f5 [svn-r27731] Removed the obsolete config/powerpc-ibm-aix5.x file. 
Tested on: Nothing. I have no access to an AIX machine.
 2015-09-09 21:05:35 -05:00
Dana Robinson
08ce739cda [svn-r27728] Merge of r27713 from revise_chunks 
Added -qflag=w:w to config/ibm-flags. This will suppress informational
messages on AIX, suppressing thousands of "__attribute__ is non-portable"
messages in the AIX nightly test output.

Tested on: Nothing. I have no access to an AIX machine.
 2015-09-09 16:04:14 -05:00
Allen Byrne
e040db8331 [svn-r27725] Add initial commands to properly build the generated files. 
Added HDF5_GENERATE_HEADERS ON to cacheinit.cmake file.

Tested: local linux
 2015-09-09 14:36:47 -05:00
Dana Robinson
9ac201d01a [svn-r27722] Updated the gnu config to cover gcc 5.2*. 
Tested on: jam w/ gcc 5.2.0
 2015-09-09 12:24:12 -05:00
Allen Byrne
d9d02bf847 [svn-r27720] Merge changes from master 2015-09-09 10:15:43 -05:00
Allen Byrne
129334f04b [svn-r27716] Publish both static and shared mod files in binaries. 2015-09-09 09:58:44 -05:00
Dana Robinson
61090f2cc3 [svn-r27702] Merge of r27699 from trunk. 
Removed some configure checks for obsolete Unix variants.
The H5pubconf.h.in file that CMake uses was also updated.

Tested on: h5committest
 2015-09-08 16:24:27 -05:00
Dana Robinson
fadb57f704 [svn-r27699] Removed some configure checks for obsolete Unix variants. 
The H5pubconf.h.in file that CMake uses was also updated.

Tested on: h5committest
 2015-09-08 15:03:41 -05:00
HDF Tester
34be1d1aed [svn-r27690] Snapshot version 1.9 release 230 2015-09-06 19:31:40 -05:00
Dana Robinson
9711495437 [svn-r27677] Merge of r27675 from trunk 
Removed library checks for nsl and socket from the autotools configure on
Solaris.

The nsl and socket libraries are no longer used by the library. Fixes
HDFFV-9118.

Tested on: jam w/ autotools and CMake
           emu w/ autotools
 2015-09-04 09:23:45 -05:00
Dana Robinson
bea85e0705 [svn-r27675] Removed library checks for nsl and socket from the autotools configure on 
Solaris.

The nsl and socket libraries are no longer used by the library. Fixes
HDFFV-9118.

Tested on: h5committest (CMake fortran fails due to an unrelated error)
           jam w/ CMake
 2015-09-04 03:20:26 -05:00
Allen Byrne
0cca701dc2 [svn-r27670] Remove SYMBOLS option - includes default checks. Pulled from master. 2015-09-03 13:27:44 -05:00
Dana Robinson
099618ad48 [svn-r27653] Merge of r27645 from the autotools branch. 
Updates to older special config files in configure.ac:

- solaris2.x renamed to solaris. There are recent changes to this file
  but the "2.x" is misleading since the changes are applied to all
  versions.

- Removed support for OSF 4.x/5.x (Digital and Tru64 Unix). We no
  longer have the config files for these.


Tested on: h5committest
 2015-09-01 11:12:53 -05:00
Dana Robinson
4b36ffe0e2 [svn-r27645] Updates to older special config files in configure.ac: 
- solaris2.x renamed to solaris. There are recent changes to this file
  but the "2.x" is misleading since the changes are applied to all
  versions.

- Removed support for OSF 4.x/5.x (Digital and Tru64 Unix). We no
  longer have the config files for these.

Tested on: jam (autogen.sh only)
           emu (Solaris 11)
 2015-09-01 03:10:00 -05:00
Allen Byrne
81ca9e4c79 [svn-r27627] Change hardcoded HDF5TESTEXPRESS value to use a CMake variable HDF_TEST_EXPRESS. 2015-08-31 15:08:56 -05:00
Scot Breitenfeld
e6f9fc5f7f [svn-r27625] Added preprocessor commands for PGI compiler. 
tested: h5committest
 2015-08-31 13:49:17 -05:00
HDF Tester
74792949c9 [svn-r27622] Snapshot version 1.9 release 229 2015-08-30 19:55:54 -05:00
Allen Byrne
8aef26f785 [svn-r27575] lowercase commands 2015-08-25 09:14:12 -05:00
Scot Breitenfeld
76d7d3cb97 [svn-r27570] Fixed issue with REAL max detection. 
tested: h5committest
 2015-08-24 14:22:55 -05:00
Scot Breitenfeld
47d97ed2c0 [svn-r27557] Added build_mod directory and updated the C try_run macro to not check for definitions and does not return unused arguments. 2015-08-24 11:07:17 -05:00
Allen Byrne
49a27febbc [svn-r27555] Merge cmake_ext_mod change 2015-08-24 11:01:40 -05:00
HDF Tester
abdb2a6456 [svn-r27551] Snapshot version 1.9 release 228 2015-08-23 19:21:39 -05:00
Jerome Soumagne
ab7d724ffd [svn-r27548] Revert r27545 2015-08-21 17:44:22 -05:00
Jerome Soumagne
7ce2d52cf6 [svn-r27545] Add first support for _Bool and make hbool_t a "real" _Bool if available 
Fix tests accordingly
 2015-08-21 13:52:30 -05:00
Allen Byrne
1b2b0bd5a3 [svn-r27540] Replace svn:externals with hard copy of files 2015-08-20 12:03:29 -05:00
Scot Breitenfeld
1436a07905 [svn-r27537] Added new FCCPPFLAGS to avoid passing CPPFLAGS to the fortran pre-processor compiler (This mainly causes issues with the xlf compilers) 
Tested: h5committest
 2015-08-20 11:01:26 -05:00
Scot Breitenfeld
2b4038e5e7 [svn-r27524] Added test to not remove double precision from valid KINDS if it is the largest compatible REAL with C. 
Tested: h5committest.
 2015-08-19 08:40:27 -05:00
HDF Tester
68347a67ef [svn-r27511] Snapshot version 1.9 release 227 2015-08-16 21:58:42 -05:00
Scot Breitenfeld
caf0e7692a [svn-r27493] Trying again to merge the F2003_v1.10 branch to the trunk. 
Tested: h5committest --PASSED--
 2015-08-11 09:35:30 -05:00
Scot Breitenfeld
3b4696ccd1 [svn-r27489] reverted merge of branch 2015-08-10 20:22:33 -05:00
Scot Breitenfeld
415eb5512b [svn-r27488] Merged the F2003_v1.10 branch to the trunk. 
Tested: h5committest
 2015-08-10 20:00:33 -05:00
Scot Breitenfeld
a9bef45c75 [svn-r27470] svn merge -r27425:27460 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-08-05 16:35:30 -05:00
Allen Byrne
9e2434625d [svn-r27469] Merge from trunk with dual-binary CMake code. 
Tested: local linux with CMake
 2015-08-05 16:01:07 -05:00
Allen Byrne
1efa2d7395 [svn-r27468] Merge corrections found elsewhere 2015-08-05 14:32:33 -05:00
Allen Byrne
173829075c [svn-r27466] Add Trunk version 2015-08-05 11:37:54 -05:00
Allen Byrne
4d0187a483 [svn-r27465] Merge dual-binary CMake changes 2015-08-05 10:56:58 -05:00
HDF Tester
f56de26444 [svn-r27432] Snapshot version 1.9 release 226 2015-07-26 19:13:36 -05:00
Albert Cheng
ac5a796db2 [svn-r27428] Bug fix: DAILYTEST-170 
Description:
    XL compilers in ostrich (PowerPC64 linux) fail in test/dt_arith
    because of the removal of the LLONG_TO_LDOUBLE_CORRECT (removed in
    r26625) and LDOUBLE_TO_LLONG_ACCURATE (removed in r26623).

Solution:
    Reverse revisions
	r26623: bring back LDOUBLE_TO_LLONG_ACCURATE configure macro
	r26625: bring back LLONG_TO_LDOUBLE_CORRECT configure macro
	r26627: bring back WANT_DATA_ACCURACY configure macro which is
	    used together with the above two macros. This also brings
	    back the enable-dconv-accuracy configure option.

Tested:
    h5committested.
    Also tested in ostrich using the XL compilers.
 2015-07-24 02:04:52 -05:00
Scot Breitenfeld
ed0bae78a0 [svn-r27426] svn merge -r27377:27425 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-07-22 17:09:05 -05:00
Scot Breitenfeld
940da78df9 [svn-r27417] comment code cleanup 2015-07-21 10:11:53 -05:00
HDF Tester
74e4cd4d21 [svn-r27412] Snapshot version 1.9 release 225 2015-07-19 19:11:50 -05:00
Scot Breitenfeld
2c897f41c0 [svn-r27378] svn merge -r27326:27377 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-07-14 10:34:45 -05:00