Commit Graph

16909 Commits

Author SHA1 Message Date
M. Scot Breitenfeld
d138f164dd removed chmod 755 for h5fc 2017-07-27 12:57:48 -05:00
M. Scot Breitenfeld
be5257f876 libtool does not pass the correct argument linking (-WL,-WL,,) for the
NAG Fortran compiler on Linux (other OSs have not been tested).
Therefore, detect if we are using the NAG Fortran compiler, and replace
the wl="-Wl," for Fortran to wl="-Wl,-WL,," in the libtool file. (HDFFV-10037)
2017-07-27 11:32:21 -05:00
Allen Byrne
04d6a3ec3c if PARALLEL copy seconf file to PAR folder 2017-07-27 11:18:52 -05:00
M. Scot Breitenfeld
972beffb59 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2017-07-27 08:54:44 -05:00
M. Scot Breitenfeld
b7f19967d7 Removed FCFLAGS when building the examples since they should already be included the h5fc wrapper. NAG complains about doubly declared options. 2017-07-27 08:52:21 -05:00
Allen Byrne
634cc5f99d Merge pull request #613 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '55d82c8f747b3a817a4a0b6b12e506b9c2dc0878':
  Add test header for log
  Verify default paths exist in table
  Make sure zip_perf program does not run concurrently
2017-07-26 11:02:55 -05:00
Allen Byrne
55d82c8f74 Add test header for log 2017-07-26 10:45:08 -05:00
Allen Byrne
cd0d804611 Verify default paths exist in table 2017-07-26 09:51:57 -05:00
Allen Byrne
373a37da01 Make sure zip_perf program does not run concurrently 2017-07-26 09:30:41 -05:00
Allen Byrne
8540b1d8fc Merge pull request #610 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '08d63d17f9ba80f205d54bc6526cb709a81ff0cb':
  Add the release note
  Correct copy to file name
  HDFFV-10246 Add check for string not null before use
  Correct case of var
2017-07-26 09:12:04 -05:00
Allen Byrne
08d63d17f9 Add the release note 2017-07-25 16:58:44 -05:00
Allen Byrne
1018256d55 Correct copy to file name 2017-07-25 15:44:25 -05:00
Allen Byrne
e790a0b42d HDFFV-10246 Add check for string not null before use 2017-07-25 15:15:20 -05:00
Allen Byrne
f5317e17a8 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '1fe3d5113aeedc4b67dae6b83984d1246c7a2701':
  Skip test in test/fheap.c when: a) multi/split drivers and b) persisting free-space or using paged aggregation strategy because the library will fail file creation (temporary) for the above conditions.
  Changes made based on RFC review comments Test the changes in a branch via daily testing.
2017-07-25 13:47:39 -05:00
Vailin Choi
3344185d5d Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '1fe3d5113aeedc4b67dae6b83984d1246c7a2701':
  Closed a wayward fapl ID in tools/test/misc/repart_test.c and tidied.
  Stripped C standard library headers from tools test code.
2017-07-25 11:29:51 -05:00
Vailin Choi
1fe3d5113a Merge pull request #604 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '558864b99d945191dbf679efcc1cbfdf4baa2810':
  Skip test in test/fheap.c when: a) multi/split drivers and b) persisting free-space or using paged aggregation strategy because the library will fail file creation (temporary) for the above conditions.
  Changes made based on RFC review comments Test the changes in a branch via daily testing.
2017-07-25 11:29:21 -05:00
Allen Byrne
3a7c5f19c4 Correct case of var 2017-07-24 16:33:48 -05:00
Dana Robinson
52148e13f8 Merge pull request #606 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:tools_misc to develop
* commit 'ec7450c4b4b44a61b282535b981576d888286fca':
  Closed a wayward fapl ID in tools/test/misc/repart_test.c and tidied.
  Stripped C standard library headers from tools test code.
2017-07-19 20:08:34 -05:00
Dana Robinson
ec7450c4b4 Closed a wayward fapl ID in tools/test/misc/repart_test.c
and tidied.
2017-07-19 15:26:34 -05:00
Dana Robinson
bee8bce551 Merge branch 'develop' into tools_misc 2017-07-19 15:09:21 -05:00
Dana Robinson
ffc9b1d917 Stripped C standard library headers from tools test code. 2017-07-19 10:46:27 -05:00
Vailin Choi
558864b99d Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~vchoi/my_hdf5_fork into develop 2017-07-18 23:29:33 -05:00
Dana Robinson
fcd2d20460 Merge pull request #603 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:tools_misc to develop
* commit 'ee7816bbfb3f22d42d5db7d779efe54ae29528cb':
  Stripped C standard library headers (and a couple of macros) from the tools code. This is all handled in H5private.h, which should be included in all tools source files.
2017-07-18 12:50:57 -05:00
Vailin Choi
ba17f16e4c Skip test in test/fheap.c when:
a) multi/split drivers and
b) persisting free-space or using paged aggregation strategy
because the library will fail file creation (temporary) for the above conditions.
2017-07-17 23:31:21 -05:00
Vailin Choi
66efce85e7 Changes made based on RFC review comments
Test the changes in a branch via daily testing.
2017-07-17 23:28:31 -05:00
Dana Robinson
ee7816bbfb Stripped C standard library headers (and a couple of macros)
from the tools code. This is all handled in H5private.h, which
should be included in all tools source files.
2017-07-17 13:24:01 -05:00
Dana Robinson
274f71be17 Fixed a failing Java plugin test. 2017-07-14 12:58:29 -07:00
Dana Robinson
d4234d0a98 Major rework of H5PL package code before bringing VOL changes
over.

Brings coding standards in line with the rest of the library,
enforces better software engineering principles, and makes
everything more maintainable.
2017-07-14 09:18:33 -07:00
Allen Byrne
26390d02df Merge pull request #601 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit 'b3a212e54b86e15ea059d856db8685f43cc00829':
  HDFFV-10254 Fix spelling
  HDFFV-10254 release note
  HDFF-10254 - Copy test files with macro to avoid POST_BUILD failure
2017-07-13 13:37:12 -05:00
Allen Byrne
b3a212e54b HDFFV-10254 Fix spelling 2017-07-13 13:36:48 -05:00
Richard Warren
516f0e3661 Merge pull request #596 in HDFFV/hdf5 from GreaterThan-2GB-MPIO to develop
* commit '6a5aa46e936340ed540359290374fa909f9213a6':
  Added a brief outline for Large MPI-IO transfers into RELEASE.txt
  Fix up the ExpressMode check for skipping slow running tests.
  Include code fixes and additional modifications pointed out by code reviewers
  Commited changes to the development branch here to allow a pull request to be published
  Commit changes needed for pull request
2017-07-13 12:44:47 -05:00
Richard Warren
6a5aa46e93 Added a brief outline for Large MPI-IO transfers into RELEASE.txt 2017-07-13 10:12:08 -04:00
Allen Byrne
c22678f3fd HDFFV-10254 release note 2017-07-12 14:23:00 -05:00
Allen Byrne
78d1de482e HDFF-10254 - Copy test files with macro to avoid POST_BUILD failure 2017-07-12 14:18:01 -05:00
Vailin Choi
2da8e74cc5 Merge pull request #597 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '8935c921f7e50607cd91c86b2237ac39a9b600af':
  Fix for HDFFV-10217 infinite loop in H5VM_power2up(). The function H5VM_power2up() returns the next power of 2 for n. When n exceeds 2^63, it overflows and becomes 0 causing the infinite looping. The fix ensures that the function checks for n >= 2^63 and returns 0.
2017-07-11 18:36:01 -05:00
Richard Warren
32b0d6ca9f Fix up the ExpressMode check for skipping slow running tests. 2017-07-10 18:20:39 -04:00
Richard Warren
0c4c562cc5 Include code fixes and additional modifications pointed out by code reviewers 2017-07-10 16:17:26 -04:00
Vailin Choi
8935c921f7 Fix for HDFFV-10217 infinite loop in H5VM_power2up().
The function H5VM_power2up() returns the next power of 2 for n.
When n exceeds 2^63, it overflows and becomes 0 causing the infinite looping.
The fix ensures that the function checks for n >= 2^63 and returns 0.
2017-07-10 03:22:48 -05:00
Jordan Henderson
bd79a782b4 Suggested changes from code review 2017-07-07 13:31:43 -05:00
Jordan Henderson
104047e13b Amend header comment error
Suggested fix for allocating too small of a buffer for the chunk data
2017-07-06 14:21:26 -05:00
Jordan Henderson
610e76c75c Clean up remaining warnings 2017-07-06 08:02:29 -05:00
Richard Warren
64d33e5e6e Commited changes to the development branch here to allow a pull request to be published 2017-07-05 16:19:57 -04:00
Richard Warren
47a4cd816c Commit changes needed for pull request 2017-07-05 15:53:19 -04:00
Jordan Henderson
0531d92d74 Add prototype for H5D__cmp_filtered_collective_io_info_entry_owner 2017-07-05 14:36:54 -05:00
Dana Robinson
46450bd9d0 Merge pull request #594 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:test_misc13 to develop
* commit '191147ec90d72619632a24242c003ecb3bccfffd':
  * Yanked the smoke check that was recently introduced to test   the unused H5I_REFERENCE ID type in test_misc19(). This fails   when running testhdf5 and skipping the reference test since   the H5R package won't be initialized. H5I_REFERENCE will   be going away soon and the ID type is unused so there's really   no point to doing anything to test it. * Cleaned up test_misc13(), which is a basic test of userblock   functionality, to not emit warnings due to the large global   array.
2017-07-05 13:14:39 -05:00
Dana Robinson
191147ec90 * Yanked the smoke check that was recently introduced to test
the unused H5I_REFERENCE ID type in test_misc19(). This fails
  when running testhdf5 and skipping the reference test since
  the H5R package won't be initialized. H5I_REFERENCE will
  be going away soon and the ID type is unused so there's really
  no point to doing anything to test it.
* Cleaned up test_misc13(), which is a basic test of userblock
  functionality, to not emit warnings due to the large global
  array.
2017-07-05 09:35:24 -07:00
Jordan Henderson
0f78b954f2 Add comment for memory copy possibly not being necessary anymore for
Multi-Chunk I/O
2017-07-05 10:38:37 -05:00
Dana Robinson
9ac6413f80 Merge pull request #590 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:java_warnings to develop
* commit '5d6ed0b298e3a40051a975a466820030360e8a31':
  Turned off unused parameter warnings in gcc for Java constants.
2017-07-05 09:55:29 -05:00
Jordan Henderson
a2cdec5ab3 Remove use of H5E_CANTDISTRIBUTE error 2017-07-05 08:48:24 -05:00
Jordan Henderson
3ce78d0d8d Add comment for full overwrite special case 2017-07-05 08:40:09 -05:00