Commit Graph

3473 Commits

Author SHA1 Message Date
Allen Byrne
a08b3adece Add new versioned filename to list 2019-09-26 08:43:41 -05:00
Allen Byrne
b2f52d0b07 Update versioning to next major version 2019-09-25 17:28:17 -05:00
Larry Knox
2a4bc8c63e Merge Binh-Minh's changes for code improvement to chunk_info.c (PR #1942)
to develop branch.
2019-09-25 14:30:54 -05:00
Jacob Smith
35a9e9c50f Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage 2019-09-23 17:23:02 -05:00
Jacob Smith
1070468dac Change print calls to HD-wrapped.
Minor formatting tweaks (inc. regressions and in-file style-matching).
2019-09-23 16:25:25 -05:00
Allen Byrne
624d5d9a8e HDFFV-10740 - skip copying dirs in for loops 2019-09-18 11:04:09 -05:00
Dana Robinson
78fda91295 Fixed some exit calls. 2019-09-06 18:06:26 -07:00
Binh-Minh Ribler
716125887d Reworked the previously refactorred code.
Platforms tested:
    Linux/64 (jelly)
    Linux/64 (platypus)
    Darwin (osx1011test)
2019-09-05 14:14:19 -05:00
Binh-Minh Ribler
339bf241be Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5-bmr into develop 2019-09-04 02:09:35 -05:00
Binh-Minh Ribler
714804b280 Improvement of test code
Description:
    Fixed tests to handle the case when a requested compression filter
    is not available.
Platform tested
    Linux/64 (jelly)
    Darwin (osx1011test)
2019-09-04 02:03:32 -05:00
Allen Byrne
781843da4b Fix CMake build of test needing compression libs 2019-09-03 12:07:29 -05:00
Binh-Minh Ribler
a8af828bbf Merge pull request #1908 in HDFFV/hdf5 from ~BMRIBLER/hdf5-bmr:develop to develop
- Added new chunk query functions: H5Dget_num_chunks(), H5Dget_chunk_info(), and H5Dget_chunk_info_by_coord()
- Fixed iterator issue in H5EA_iterate(), H5FA_iterate(), and H5D__none_idx_iterate()

* commit '96dab622e3bbe75d85b0cef3ca2bd5288cf4ac32':
  Fixed error code and error messages Tested on Jelly (very minor)
  Changed H5VL_NATIVE_DATASET_GET_CHUNK_INFO_BY_COOR to H5VL_NATIVE_DATASET_GET_CHUNK_INFO_BY_COORD per a review comment.
  Updated comments
  Updated based on reviews and refactored test code
  Code cleanup and refactor
  Re-ordered items w.r.t. date.
  Fixed typo
  Added notes about HDFFV-10677 and HDFFV-10661
  HDFFV-10677 and HDFFV-10661
2019-09-03 11:08:42 -05:00
Binh-Minh Ribler
96dab622e3 Fixed error code and error messages
Tested on Jelly (very minor)
2019-09-03 11:00:29 -05:00
Binh-Minh Ribler
bde9257f02 Updated comments 2019-09-01 01:25:59 -05:00
Binh-Minh Ribler
b679d11bcc Updated based on reviews and refactored test code 2019-09-01 01:13:08 -05:00
Allen Byrne
0b6f5e88cd Fix EXISTS test syntax 2019-08-29 14:43:35 -05:00
Binh-Minh Ribler
a633e33334 Code cleanup and refactor 2019-08-29 00:53:40 -05:00
Allen Byrne
43ff3fdc33 fix get gethostname for windows 2019-08-28 10:19:03 -05:00
Binh-Minh Ribler
e06bf9d263 HDFFV-10677 and HDFFV-10661
Description:
    - Added functions to query chunk information:
        H5Dget_num_chunks(dset_id, fspace_id, *nchunks)
            Gets the number of written chunks that intersect with the given
            dataspace.  However, in this version, the intersection is not
            yet completed.  Thus, the number of all written chunks will be
            returned.
        H5Dget_chunk_info_by_coord(dset_id, *offset, *filter_mask, *addr, *size)
            Given a chunk's logical coordinates, returns the chunk's filter,
            address, and size.
        H5Dget_chunk_info(dset_id, fspace_id, index, *offset, *filter_mask, *addr, *size)
            Given a chunk's index, returns the chunk's logical coordinates, filter,
            address, and size.  The chunk belongs to a set of chunks that have
            nonempty intersection with the specified dataspace.  However, in
            this version, the intersection is not yet completed, and the index
            is of all the written chunks.
        These functions comply with VOL.

    - Fixed some oversights found in the library for the tests in chunk_info.c
      to work correctly.  The returned value from a callback function was not
      checked in H5EA_iterate(), H5FA_iterate(), and H5D__none_idx_iterate().
      This oversight caused a callback function to continue iterating even though
      it's supposed to stop.
Platforms tested:
    Linux/64 (jelly)
    Linux/64 (platypus)
    Darwin (osx1011test)
2019-08-28 10:08:12 -05:00
Allen Byrne
ba974c031d OESS-29 Update HD prefix mostly 2019-08-24 14:07:33 -05:00
Quincey Koziol
5d6f27b32b Merge branch 'develop' into shared_file_ptr 2019-08-21 15:36:17 -05:00
Quincey Koziol
53eaeff26a Begin converting the H5MF interface to use shared file pointers instead
of top file pointers.
2019-08-20 21:07:13 -05:00
Dana Robinson
8c40dab59e Untangle #ifdef mess in ROS3 code. 2019-08-19 18:02:47 -07:00
Quincey Koziol
df36318b5f Rest of changes for 'top' file pointer to 'shared' file pointer for H5F__accum
routines.
2019-08-19 18:00:05 -05:00
Quincey Koziol
85a56a9c4f Partial H5F__accum_* routines. 2019-08-19 17:47:28 -05:00
Allen Byrne
9081fb266c Add missing HD prefix 2019-08-18 11:33:45 -05:00
Allen Byrne
96bf97f534 Update HD prefix and reconcile hl/cpp test 2019-08-16 13:23:29 -05:00
Allen Byrne
64e6665b54 Add HD prefix to tests 2019-08-15 16:46:15 -05:00
Allen Byrne
8ef09e5ce9 Correct name of folder 2019-08-15 11:07:24 -05:00
Allen Byrne
98c8c6e45b Mostly whitespace in testpar, addl changes for tmp dir 2019-08-15 10:28:40 -05:00
Jake Smith
396edbe6bf Merge pull request #1872 in HDFFV/hdf5 from ~JAKE.SMITH/hdf5:bugfix/ros3_hdfs_warns_squashed to develop
* commit '2e5cd3d2b2d953420252c80ab5e32ac95ac0c5b3':
  Fix compiler warnings with diabled ROS3 and HDFS VFDs. Fix misuse of [HD]strncpy and [HD]snprintf. Minor formatting changes. Fix test cleanup issue with java groups example.
2019-08-14 15:54:10 -05:00
Ray Lu
47e3d99f65 Merge pull request #1871 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:bugfix/directory_name_develop to develop
* commit '0b868668bac0d268120844adb9ad216a9a8e1395':
  Changed the directory name left out from the previous commit.
  Changed the name of the temporary directory from 'tmp' to a special name to avoid possible conflicts.
2019-08-14 15:49:57 -05:00
Jacob Smith
2e5cd3d2b2 Fix compiler warnings with diabled ROS3 and HDFS VFDs.
Fix misuse of [HD]strncpy and [HD]snprintf.
Minor formatting changes.
Fix test cleanup issue with java groups example.
2019-08-14 15:36:45 -05:00
Songyu Lu
0b868668ba Changed the directory name left out from the previous commit. 2019-08-14 15:22:06 -05:00
Songyu Lu
b234263bbf Changed the name of the temporary directory from 'tmp' to a special name to avoid possible conflicts. 2019-08-14 15:08:46 -05:00
Allen Byrne
2102be3259 HDFFV-10879 fix test varname 2019-08-14 13:50:25 -05:00
Allen Byrne
e42120c308 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'aeb145428f5e6bc51742fff031b0cf8cf6fbefbb':
  Updated h5trav.c to emit output that doesn't require ddl changes for map support.
  Fixed Map API CMake option
  Renamed H5Mdelete_key to H5Mdelete and H5Mset to H5Mput.
  Added ifdef for intel compilers, __GNUC__ has to be defined for header files which use it to work with intel compilers. This gives a warning for intel compiler about fallthrough, so added a check not to include fallthrough if using intel compilers.
  Added the map (H5M) API
2019-08-13 13:15:55 -05:00
Allen Byrne
ac4f82fcd4 Remove old code 2019-08-13 10:26:43 -05:00
Allen Byrne
a7281b117c Correct error test spelling and use 2019-08-13 10:25:05 -05:00
Dana Robinson
5b6bd7c922 Added the map (H5M) API 2019-08-13 01:36:42 -07:00
Allen Byrne
c476f02076 HDFFV-10879 fix reference file 2019-08-12 15:38:15 -05:00
Allen Byrne
07af403991 Add option to explicitly disable extra tests 2019-08-07 15:18:30 -05:00
Allen Byrne
9f12d83975 Cleanup HD prefix 2019-08-05 16:57:27 -05:00
Allen Byrne
1ef856f8b5 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '5fe1216a4e6af8feef0551f7bece8a0e193310a9':
  Fix return type for H5Sselect_intersect_block().
  Updated H5TRACE macro.
  Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, along with tests and minor cleanups and refactorings.
2019-08-05 06:44:11 -05:00
Quincey Koziol
5fe1216a4e Merge pull request #1819 in HDFFV/hdf5 from ~KOZIOL/hdf5:develop to develop
* commit '905d40aa6f6eb603c5507e7967130760e3a2e43c':
  Fix return type for H5Sselect_intersect_block().
  Updated H5TRACE macro.
  Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, along with tests and minor cleanups and refactorings.
2019-08-04 18:38:36 -05:00
Allen Byrne
c60ceb8c08 Merge reconciliation and VFD test fixes 2019-08-04 15:19:51 -05:00
Allen Byrne
0147a6c713 Fix VFD tests and repack 2019-08-03 17:28:50 -05:00
Larry Knox
0c374d65c6 Fix conflicting types for reset_raw_data_files() parameter in external_common.c changed from int to hbool_t.
Change 0 and 1 to FALSE and TRUE in calls to reset_raw_data_files().
2019-08-01 10:18:45 -05:00
Allen Byrne
8120ba8bc1 Fix missing export tag 2019-07-31 16:50:45 -05:00
Allen Byrne
519dfe549a Mostly whitespace cleanup and consistent test format 2019-07-31 15:06:45 -05:00