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Author SHA1 Message Date
Allen Byrne
a08b3adece Add new versioned filename to list 2019-09-26 08:43:41 -05:00
Larry Knox
9c88755922 Merge pull request #1948 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit 'd931415bb96aae645832898c2f9eee0d02fe69b4':
  Update N_FSINFO_VERSION_BOUNDS to H5F_LIBVER_NBOUND.
 2019-09-25 18:07:40 -05:00
Larry Knox
d931415bb9 Update N_FSINFO_VERSION_BOUNDS to H5F_LIBVER_NBOUND. 2019-09-25 17:56:39 -05:00
Larry Knox
a563949da4 Merge pull request #1947 in HDFFV/hdf5 from ~BYRN/hdf5_merge_adb:develop to develop 
* commit 'd08db4f8550ee023f2303f3064308c1fa9854552':
  Remove file script
  Update versioning to next major version
 2019-09-25 17:36:24 -05:00
Allen Byrne
d08db4f855 Remove file script 2019-09-25 17:35:52 -05:00
Allen Byrne
b2f52d0b07 Update versioning to next major version 2019-09-25 17:28:17 -05:00
Allen Byrne
46f81a33dd Merge pull request #1944 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit 'b04e1ad058fd98fc0b303586dd5f6f19aa645ed0':
  Update develop branch version to 1.13.0 after creation of hdf5_1_12 branch.
 2019-09-25 16:23:52 -05:00
Larry Knox
b04e1ad058 Update develop branch version to 1.13.0 after creation of hdf5_1_12 
branch.
 2019-09-25 16:21:23 -05:00
Larry Knox
6632780f41 Merge pull request #1943 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit '2a4bc8c63e842d5e7551e6e75a9ca95c0c2d2886':
  Merge Binh-Minh's changes for code improvement to chunk_info.c (PR #1942) to develop branch.
 2019-09-25 15:10:37 -05:00
Larry Knox
2a4bc8c63e Merge Binh-Minh's changes for code improvement to chunk_info.c (PR #1942) 
to develop branch.
 2019-09-25 14:30:54 -05:00
Jake Smith
f77d8f04fd Merge pull request #1756 in HDFFV/hdf5 from ~JAKE.SMITH/hdf5:bugfix/repack_external_storage to develop 
* commit '9a388325ebaec339f67ddd210ca31ddcc3ede973':
  Update to current external file population.
  Revert else-if to single line.
  Change print calls to HD-wrapped. Minor formatting tweaks (inc. regressions and in-file style-matching).
  Refactor h5repackgentest to have more modular internals, for easier addition of new tests. Update manifest and test script for new hdf5 external-storage .h5 files.
  Refactoring.
  Add copyright/disclaimer to repack gentest. Minor formatting tweaks.
  Minor formatting adjustments.
  Undo some formatting modifications. Update MANIFEST.
  Add forgotten files to include from h5repack testfiles for tests.
  Fix failing automated reporting. Add 8-bit big-endian testfile.
  First pass at repack consolidating external storage if layout given. Checks out manually, tests still complain.
  Formatting changes, mostly.
  Add initial failing test for h5repack copying external data into new file.
  Modify code comments for clarity. Some minor reformatting.
  Some minor reformatting. Replace tabs with spaces.
  Add test that uses the family member FAPL setting.
  refactor h5repack_main.c -- remove some redundancy, formatting
  Fit help message to 80 character width and clarify some details.
 2019-09-24 16:43:30 -05:00
Jacob Smith
9a388325eb Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage 2019-09-24 16:40:02 -05:00
Allen Byrne
9c73ed788a Merge pull request #1940 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '8a2a500fef227e4f813f0059b365869268354048':
  Fix missing option and incorrect close
 2019-09-24 16:12:51 -05:00
Jacob Smith
4ecc50bc13 Update to current external file population. 2019-09-24 15:29:56 -05:00
Jacob Smith
1f7d556ccd Revert else-if to single line. 2019-09-24 15:22:38 -05:00
Allen Byrne
8a2a500fef Fix missing option and incorrect close 2019-09-24 14:49:37 -05:00
Dana Robinson
6b60b95dbb Merge pull request #1939 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop 
* commit '6eb506eff76b5455f8aac8889c6809aca2d8be52':
  Revert "Moved NDEBUG guards to H5EA_DEBUG in H5EA package."
  Revert "Fix for H5EA debug package when built in release mode."
 2019-09-24 10:42:32 -05:00
Dana Robinson
6eb506eff7 Revert "Moved NDEBUG guards to H5EA_DEBUG in H5EA package." 
This reverts commit 431123503d387bce30b1f6db7dc4ad3a33bc51bb.
 2019-09-24 05:20:30 -05:00
Dana Robinson
40b2eae5e9 Revert "Fix for H5EA debug package when built in release mode." 
This reverts commit 911b1ca67fdf7c2f3a32dd42c591e4e9b2fa1950.
 2019-09-24 05:19:44 -05:00
Jacob Smith
35a9e9c50f Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage 2019-09-23 17:23:02 -05:00
Jacob Smith
1070468dac Change print calls to HD-wrapped. 
Minor formatting tweaks (inc. regressions and in-file style-matching).
 2019-09-23 16:25:25 -05:00
Jacob Smith
aa797af31b Refactor h5repackgentest to have more modular internals, for easier 
addition of new tests.
Update manifest and test script for new hdf5 external-storage .h5 files.
 2019-09-23 16:21:37 -05:00
Larry Knox
7997eb8c84 Merge pull request #1937 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'cf9eff93e05c9e68d82ebb1fc1e02319e428af35':
  Remove obsolete symbol
  small syntax changes
 2019-09-23 12:39:01 -05:00
Allen Byrne
cf9eff93e0 Remove obsolete symbol 2019-09-20 09:30:36 -05:00
Allen Byrne
0c49a77c19 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '93e8bbd9f47d6a2eace95f2ed3b2dd4b6336940a':
  Renamed get/set_time() calls in the tools library to avoid name clash when building static parallel HDF5 w/ static linking to OpenMPI.
 2019-09-19 16:57:51 -05:00
Dana Robinson
93e8bbd9f4 Merge pull request #1936 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop 
* commit 'a6930a2bcfd37ea3610baafb608faec883286315':
  Renamed get/set_time() calls in the tools library to avoid name clash when building static parallel HDF5 w/ static linking to OpenMPI.
 2019-09-19 16:42:46 -05:00
Allen Byrne
aa8c7b31d7 small syntax changes 2019-09-19 16:32:40 -05:00
Dana Robinson
a6930a2bcf Renamed get/set_time() calls in the tools library to avoid name 
clash when building static parallel HDF5 w/ static linking to OpenMPI.
 2019-09-19 13:50:49 -07:00
Allen Byrne
80b371f32e Merge pull request #1926 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '8cddc96f73e8f90f67792405f5142b419e9061d7':
  Change unused variable to generic form
  Whitespace cleanup
  Add missing HD prefix
  HDFFV-10740 - skip copying dirs in for loops
  Correct HDF5 options to tristate values.
  HDFFV-10905 fix test scripts for no zlib
  HDFFV-10903 - fix VFD constants in JNI
 2019-09-19 14:15:54 -05:00
Allen Byrne
8cddc96f73 Change unused variable to generic form 2019-09-19 13:42:46 -05:00
Allen Byrne
ddf23c80fc Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '4d4a88a9f3775d1c6be820208a2699ae38d586b4':
  Fix for H5EA debug package when built in release mode.
 2019-09-19 08:48:07 -05:00
Dana Robinson
4d4a88a9f3 Merge pull request #1932 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop 
* commit '911b1ca67fdf7c2f3a32dd42c591e4e9b2fa1950':
  Fix for H5EA debug package when built in release mode.
 2019-09-18 16:28:09 -05:00
Dana Robinson
911b1ca67f Fix for H5EA debug package when built in release mode. 2019-09-18 13:25:02 -07:00
Allen Byrne
6f34503a5a Whitespace cleanup 2019-09-18 12:11:12 -05:00
Allen Byrne
4775b6a3d9 Add missing HD prefix 2019-09-18 11:15:58 -05:00
Allen Byrne
624d5d9a8e HDFFV-10740 - skip copying dirs in for loops 2019-09-18 11:04:09 -05:00
Allen Byrne
671649f6f2 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '57f1a2124c65283fc48c4ca700392e1682d0e754':
  Moved NDEBUG guards to H5EA_DEBUG in H5EA package.
 2019-09-18 08:46:11 -05:00
Dana Robinson
57f1a2124c Merge pull request #1930 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop 
* commit '431123503d387bce30b1f6db7dc4ad3a33bc51bb':
  Moved NDEBUG guards to H5EA_DEBUG in H5EA package.
 2019-09-17 20:17:14 -05:00
Dana Robinson
431123503d Moved NDEBUG guards to H5EA_DEBUG in H5EA package. 2019-09-17 16:53:18 -07:00
Allen Byrne
8e686c8211 Correct HDF5 options to tristate values. 2019-09-17 15:43:27 -05:00
Allen Byrne
564d710e93 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'ab52a0effa605ad6d75cb77cf708bba795cba641':
  Added MPICH_SKIP_MPICXX and OMPI_SKIP_CXX to H5public.h to avoid inadvertant linking to the deprecated MPI C++ wrappers. Fixes HDFFV-10893.
 2019-09-17 14:43:36 -05:00
Allen Byrne
3790ba38a1 HDFFV-10905 fix test scripts for no zlib 2019-09-17 14:38:26 -05:00
Dana Robinson
ab52a0effa Merge pull request #1927 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop 
* commit 'f5a84c9856888446e329dd36bff842e5a2db708c':
  Added MPICH_SKIP_MPICXX and OMPI_SKIP_CXX to H5public.h to avoid inadvertant linking to the deprecated MPI C++ wrappers. Fixes HDFFV-10893.
 2019-09-17 14:07:00 -05:00
Dana Robinson
f5a84c9856 Added MPICH_SKIP_MPICXX and OMPI_SKIP_CXX to H5public.h to avoid inadvertant 
linking to the deprecated MPI C++ wrappers. Fixes HDFFV-10893.
 2019-09-17 10:52:16 -07:00
Allen Byrne
adce9e7f4e HDFFV-10903 - fix VFD constants in JNI 2019-09-17 10:30:04 -05:00
Allen Byrne
f2760f6117 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '046e6e8770212dc020279aba1d7a5c9aa5ec5913':
  Added a release note for HDFFV-10892 (fcntl lock bug).
  Fix segfault after H5VL_loc_params_t fix merge
 2019-09-17 09:24:36 -05:00
Dana Robinson
046e6e8770 Merge pull request #1924 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop 
* commit '387d2e671c597a51b4166667a16e740a8e1449fa':
  Added a release note for HDFFV-10892 (fcntl lock bug).
 2019-09-16 18:18:02 -05:00
Jordan Henderson
1215cec501 Merge pull request #1923 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to develop 
* commit 'db1022ef5dad4ee450ca092b8b471040f405bbcf':
  Fix segfault after H5VL_loc_params_t fix merge
 2019-09-16 17:39:04 -05:00
Dana Robinson
387d2e671c Added a release note for HDFFV-10892 (fcntl lock bug). 2019-09-16 15:17:31 -07:00
Jordan Henderson
db1022ef5d Fix segfault after H5VL_loc_params_t fix merge 2019-09-16 15:35:09 -05:00