Commit Graph

482 Commits

Author SHA1 Message Date
M. Scot Breitenfeld
6eab04894e HDFFV-10223 Shared libraries fail test on OSX with fortran enabled with cmake
This is now fixed via the HDFFV-10325 fix.
2017-12-07 08:56:04 -06:00
M. Scot Breitenfeld
1ccdb2e23f fixed check output string to match test 2017-06-09 12:19:50 -05:00
M. Scot Breitenfeld
2b2a1d605e Fix for shared fortran libraries on mac (HDFFV-2772). 2017-05-18 16:32:26 -05:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Quincey Koziol
0313cbb91d Final merge of page buffering branch to develop 2017-03-13 21:30:37 -07:00
Allen Byrne
cdd4df5127 Fix test output file name 2017-01-12 12:24:10 -06:00
Allen Byrne
244faaa0d0 HDFFV-10094: upgrade cmake command conventions
Also converted tests to use macros
2017-01-11 14:02:34 -06:00
Allen Byrne
e1bcae8a6a Update cmake min version and cmake command convention 2017-01-10 17:10:03 -06:00
M. Scot Breitenfeld
a5c15d7b59 Enabled commented out code,
HDFFV-9498 -- PGI COMPILER BUG: READ(...,pos,) fails for pgf90 causes offset test to fail
2017-01-06 15:25:21 -06:00
Allen Byrne
bb94c5efde Merge pull request #67 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '052ca6a74199005efe7f324f2a3ac508b18cdc27':
  Correct name and usage of cmake variable
  Add STGZ to mac cpack list
  Merge from master cmake_conf project
2016-10-14 11:46:02 -05:00
Allen Byrne
052ca6a741 Correct name and usage of cmake variable 2016-10-10 12:32:06 -05:00
M. Scot Breitenfeld
de07b2d224 Fix:HDFFV-9987
With HDF5-1.10 you cannot specify default dataspace for Fortran (H5S_ALL_F)

Resolution:
 Made H5S_ALL_F INTEGER(HID_T) to match C.
2016-10-10 10:25:09 -05:00
M. Scot Breitenfeld
f9364c0080 removed the use of C_SIZEOF for non BIND(C) derived type 2016-10-03 13:26:39 -05:00
M. Scot Breitenfeld
e45ee9fa96 Fixed test to use storage_size instead of c_sizeof when available. 2016-09-29 14:52:26 -05:00
M. Scot Breitenfeld
9fbebbe6d7 Fixed: Fortran_DOUBLE was being set to C_LONG_DOUBLE when C_LONG_DOUBLE is not available. 2016-09-29 11:52:12 -05:00
M. Scot Breitenfeld
064073307a Removed duplicate FCFLAG. 2016-09-29 10:49:08 -05:00
M. Scot Breitenfeld
41b22417b7 Added path to source include files when building buidiface. 2016-09-26 12:08:18 -05:00
M. Scot Breitenfeld
7e5fcd3a4a Added rule to build buildiface program, without a rule, build would add repeated compile options when using the NAG compiler. 2016-09-26 11:49:06 -05:00
M. Scot Breitenfeld
8eb76e1f65 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2016-09-22 12:48:53 -05:00
M. Scot Breitenfeld
392b8ce3c9 HDFFV-9973 Fortran library fails to compile and fails tests with NAG compiler
Fixes issues with KIND = BYTE assumptions.
2016-09-22 12:02:02 -05:00
Allen Byrne
583af563d9 Add missing target depends command 2016-09-21 12:22:16 -05:00
Allen Byrne
bc1d833a80 Fix typo 2016-09-21 10:49:48 -05:00
Allen Byrne
e219ee88e4 Add gen file technique to HL and test fortran libraries 2016-09-21 10:46:03 -05:00
Scot Breitenfeld
a4e4094c76 [svn-r30259] Fixed: HDFFV-9965: HDF5 Fails to build when sizeof or c_sizeof is not available in Fortran
Added the use of 'storage_size' if 'c_sizeof' is not available.

Tested (jelly, intel)
2016-08-05 13:30:53 -05:00
Scot Breitenfeld
0c2964383b [svn-r30078] Fixed -- HDFFV-9675 Removed unused variables in Fortran Library.
Tested Jelly.
2016-06-15 08:56:20 -05:00
Allen Byrne
7b291f3531 [svn-r29866] Add files to clear test generated files tests. 2016-05-04 10:24:16 -05:00
Allen Byrne
74f3326a67 [svn-r29862] Convert source list names from *_SRCS to *_SOURCES.
Add/convert most tools to use new HDF5_TOOLS_DIR instead of HDF5_TOOLS_SRC_DIR CMake VAR.
2016-05-04 10:06:05 -05:00
Dana Robinson
a1035bd806 [svn-r29336] Removed unused variables from Fortran code.
Updated gnu Fortran flags.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ Fortran
2016-03-08 01:38:33 -05:00
Allen Byrne
63249be0e1 [svn-r29226] HDFFV-9552: merge in java code. 2016-02-28 21:43:00 -05:00
Dana Robinson
19a8216bd5 [svn-r29182] Re-commit of HDFFV-8740 fix, which adds the ability to configure
external dataset storage path behavior.

This check-in fixes a bug in the original check-in where the
external path stored in the file struct was not copied on reopen
causing subsequent dataset operations to fail.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ fortran and C++
           autotools parallel (MPICH 3.1.4) w/ fortran
2016-02-22 16:40:03 -05:00
Scot Breitenfeld
fe2b65f3e4 [svn-r29172] Fixed double word typo in #ifdef H5_FORTRAN_HAVE_C_SIZEOF 2016-02-19 16:12:32 -05:00
Scot Breitenfeld
5126111606 [svn-r29165] Various rododoc fixes. Effects comments only. 2016-02-19 14:09:34 -05:00
Scot Breitenfeld
1b2c30753d [svn-r29155] HDFFV-9652: Add fortran wrappers/test for collective metadata functions
Tested: h5committest.new
2016-02-19 09:24:11 -05:00
Scot Breitenfeld
39fa385594 [svn-r29092] Fixed uninitialized return value from fortran API. 2016-02-11 16:50:22 -05:00
Scot Breitenfeld
c418bc964d [svn-r29062] HDFFV-9564: Implement VDS Fortran wrappers.
Tested: h5committest.new
2016-02-08 09:01:29 -05:00
Dana Robinson
9af344117c [svn-r27794] Reintegration merge of features/autotools_rework branch with trunk
NOTES:

- Developers will have to run autogen.sh before building with the autotools.

- autogen.sh takes the -p option to mimic the old bin/reconfigure behavior.

- The generated error, overflow and version headers have been left in place.

- The generated H5LT parser code has also been left in place.

- There are no changes for CMake users at this time.

Tested on: h5committest
2015-09-15 15:38:57 -05:00
Quincey Koziol
1023374492 [svn-r27768] Description:
Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.

    This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.

    Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros.  (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)

    Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    Linux/64 3.10.x (kituo) w/serial & parallel
    Linux/64 2.6.x (ostrich) w/serial
2015-09-13 22:58:59 -05:00
Allen Byrne
10da31a926 [svn-r27745] Merge trunk revision 27744 2015-09-10 09:11:17 -05:00
Dana Robinson
b106502c57 [svn-r27683] Restored the _POSIX_C_SOURCE flag that had been commented out
and modified the fortran/test/ Makefile.am to remove the build
error with Intel Fortran.

Tested on: h5committest
2015-09-05 17:56:59 -05:00
Allen Byrne
4906383c0f [svn-r27676] Fix dependencies of generated file 2015-09-04 08:55:29 -05:00
Allen Byrne
cbf5bb6b78 [svn-r27674] Attempt to fix race condition on windows 2015-09-03 16:45:17 -05:00
Scot Breitenfeld
33a2e52c6e [svn-r27663] Removed the lines:
# Source files are used for both the library and fortranlib_test.
# Automake will complain about this without the following workaround.
fortranlib_test_FCFLAGS=$(AM_FCFLAGS)
fortranlib_test_CFLAGS=$(AM_CFLAGS)

because they caused Fortran build rules (.f90.o, .F90.o) to be ignored, causing the CPP flags to be passed to the Fortran compiler, causing the xlf compiler to fail.

Tested: ostrich (xlf), h5committest
2015-09-02 11:33:12 -05:00
Allen Byrne
f72ed2d8dc [svn-r27648] Fortran executables depend on modules created by test library, add command to explictly enforce the building of the library before building executables. 2015-09-01 09:56:39 -05:00
Scot Breitenfeld
17f5ee3624 [svn-r27647] Added compiler check for PGI and CMake version.
CMake must be > v3.3 to compile with PGI due to
CMake bug in earlier versions.
2015-09-01 09:00:14 -05:00
Dana Robinson
59aa015d9f [svn-r27638] Merged r27500-27631 from trunk. 2015-08-31 23:36:17 -05:00
Scot Breitenfeld
e6f9fc5f7f [svn-r27625] Added preprocessor commands for PGI compiler.
tested: h5committest
2015-08-31 13:49:17 -05:00
Allen Byrne
6635d4c003 [svn-r27586] HDFFV-9497: Add back ALLOW_UNSUPPORTED OPTION.
Added new option SKIP_HDF5_FORTRAN_SHARED
2015-08-26 11:48:42 -05:00
Scot Breitenfeld
2faae30c8d [svn-r27585] disabled the test "test_userblock_offset"; it fails for unknown reasons on platypus with pgf90 compiler when reading the streamed file back. 2015-08-26 10:13:43 -05:00
Scot Breitenfeld
4939ee2419 [svn-r27580] Fix for:
HDFFV-9283
Add H5Dget_offset fortran wrapper

tested: h5committest
2015-08-25 16:49:36 -05:00
Scot Breitenfeld
1436a07905 [svn-r27537] Added new FCCPPFLAGS to avoid passing CPPFLAGS to the fortran pre-processor compiler (This mainly causes issues with the xlf compilers)
Tested: h5committest
2015-08-20 11:01:26 -05:00