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Author SHA1 Message Date
Binh-Minh Ribler
9b6f4d4937 Adding new C++ wrappers 
Description:
    Added wrappers for H5Tencode to class DataType and H5Tdecode to
    classes DataType and its subclasses.

        // Creates a binary object description of this datatype.
        void DataType::encode()

        // Returns the decoded type from the binary object description.
        virtual DataType* DataType::decode() const;
        virtual DataType* ArrayType::decode() const;
        virtual DataType* CompType::decode() const;
        virtual DataType* DataType::decode() const;
        virtual DataType* EnumType::decode() const;
        virtual DataType* FloatType::decode() const;
        virtual DataType* IntType::decode() const;
        virtual DataType* StrType::decode() const;
        virtual DataType* VarLenType::decode() const;

Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
 2017-09-04 00:41:47 -05:00
Binh-Minh Ribler
883a235d5c Miscellaneous improvements (cont.) 
Description:
    Put back H5Location::getNumObjs and marked as deprecated in favor of
    Group::getNumObjs.
Platforms tested:
    Linux/32 2.6 (jam)
    Darwin (osx1010test)
 2017-08-25 12:07:04 -05:00
Binh-Minh Ribler
f4c4ab678b Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_cpp3 into develop 2017-08-24 13:47:44 -05:00
Binh-Minh Ribler
0e44181bbb Miscellaneous improvements 
Description:
    Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info)
    Switched reinterpret_cast to static_cast in H5Object::iterateAttrs
    Miscellaneous cleanup
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
 2017-08-24 13:46:39 -05:00
Vailin Choi
593e4038b3 Merge pull request #641 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop 
* commit '268f01fd477e0474fa5727a47abef214a5e4293b':
  Fix for daily test failure Fix for the compilation error from the PGI compiler.
 2017-08-24 11:46:53 -05:00
Vailin Choi
268f01fd47 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~vchoi/my_hdf5_fork into develop 2017-08-24 11:45:01 -05:00
Vailin Choi
38b4e97692 Fix for daily test failure 
Fix for the compilation error from the PGI compiler.
 2017-08-24 11:42:35 -05:00
Vailin Choi
f3b72e1bde Merge pull request #637 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop 
* commit '1ef8577a4aaaa4120a819ff36747fdca99abdc26':
  Modifications based on comments from pull request review (1) Remove unnecessary asserts (2) Add code to insert bad offset values to the test file in gen_bad_offset.c
  Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file Fix H5HL_offset_into() to return error when offset exceeds heap data block size. Also fix other places that call this routine to detect error return.
 2017-08-23 16:35:19 -05:00
Vailin Choi
1ef8577a4a Modifications based on comments from pull request review 
(1) Remove unnecessary asserts
(2) Add code to insert bad offset values to the test file in gen_bad_offset.c
 2017-08-23 16:23:09 -05:00
Allen Byrne
1b647b18fe Merge pull request #639 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '678c3ae1535b9b3b9faa53bc48250f1635778dd7':
  HDFFV-10188 force non-native type description
  HDFFV-10188 emu insists on printing non-native description
 2017-08-23 11:19:05 -05:00
Allen Byrne
678c3ae153 HDFFV-10188 force non-native type description 2017-08-23 10:18:08 -05:00
Allen Byrne
d200cd31a7 HDFFV-10188 emu insists on printing non-native description 2017-08-23 10:16:49 -05:00
Allen Byrne
b901326501 Merge pull request #636 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '3dcb1887085678f08c02b64f1a04a77cd607cc4c':
  HDFFV-10188 fix typo
  HDFFV-10188 add missing copy commands
  HDFFV-10188 Add tests and files
  HDFFV-10188 enable null space test
  HDFFV-10188 add release note
  HDFFV-10188 - Check for empty string first
  HDFFV-10188 error on NULL dataspace
 2017-08-22 15:29:35 -05:00
Vailin Choi
b07eb6efd0 Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file 
Fix H5HL_offset_into() to return error when offset exceeds heap data block size.
Also fix other places that call this routine to detect error return.
 2017-08-22 01:36:20 -05:00
Allen Byrne
3dcb188708 HDFFV-10188 fix typo 2017-08-21 13:06:57 -05:00
Allen Byrne
7acbb154d1 HDFFV-10188 add missing copy commands 2017-08-21 12:26:48 -05:00
Allen Byrne
138c3ee366 HDFFV-10188 Add tests and files 2017-08-21 11:56:31 -05:00
Allen Byrne
f695491f05 HDFFV-10188 enable null space test 2017-08-21 10:35:49 -05:00
Allen Byrne
6e8b9dcfd4 HDFFV-10188 add release note 2017-08-21 09:33:54 -05:00
Allen Byrne
164eee91cf HDFFV-10188 - Check for empty string first 2017-08-16 15:01:29 -05:00
Allen Byrne
46f8c941d7 HDFFV-10188 error on NULL dataspace 2017-08-04 16:45:40 -05:00
Scot Breitenfeld
a6d5bf1a86 Merge pull request #630 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit '2a1e499b0134ed319cd9d60a6521ba83b3a2cfa8':
  changed comments, (HDFFV-10037)
  changed the test for NAG fortran compiler, (HDFFV-10037)
 2017-08-03 10:30:26 -05:00
M. Scot Breitenfeld
2a1e499b01 changed comments, (HDFFV-10037) 2017-08-03 09:20:05 -05:00
M. Scot Breitenfeld
8138062d74 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2017-08-03 09:17:33 -05:00
M. Scot Breitenfeld
2332135332 changed the test for NAG fortran compiler, (HDFFV-10037) 2017-08-03 09:17:24 -05:00
Allen Byrne
00a50b6d72 Merge pull request #627 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '3635cc24b0759285eff37fe986e14e368a4a19b1':
  Fix misnamed file in test script
  Add h5repack tests for paged aggregation
 2017-08-02 15:27:11 -05:00
Allen Byrne
3635cc24b0 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'a83b6a7c6e6aca1a329c274282c691ffb417abc4':
  Moved H5PL diagnostic pragmas to comply with old gcc requirements that they be outside of functions.
 2017-08-02 13:24:31 -05:00
Allen Byrne
5615cc2a69 Fix misnamed file in test script 2017-08-02 12:42:40 -05:00
Dana Robinson
a83b6a7c6e Merge pull request #625 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5pl_commit to develop 
* commit '81340c609ba5049b34845ff2f06b2025ec5d5b22':
  Moved H5PL diagnostic pragmas to comply with old gcc requirements that they be outside of functions.
 2017-08-02 12:08:31 -05:00
Allen Byrne
02a56054b0 Add h5repack tests for paged aggregation 2017-08-02 10:53:17 -05:00
Dana Robinson
81340c609b Moved H5PL diagnostic pragmas to comply with old gcc requirements that they 
be outside of functions.
 2017-08-02 08:32:31 -07:00
Vailin Choi
8b8e7ae232 Merge pull request #620 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop 
* commit '59e94f5009a1f738d9924be942448f8cf6355b00':
  Add h5repack tests for paged aggregation Add tests to h5repack.sh.in to verify options added for paged aggregation work as expected.
 2017-08-02 01:49:42 -05:00
Scot Breitenfeld
560073c253 Merge pull request #624 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit '00d97d556b3e57129d8c7bbecf8b15497b3f056b':
  added test for NAG compiler and use the FC_BASENAME for NAG detection, (HDFFV-10037)
  added test for NAG compiler and use the FC_BASENAME for NAG detection, (HDFFV-10037)
 2017-08-01 16:19:22 -05:00
Allen Byrne
6f9db7ed26 Merge pull request #623 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'f4e9bc21fa3d3d678ca80083dbd412b34c3ab91b':
  HDFFV-10256 add release note
  HDFFV-10256 Add test
  HDFFV-10256 correct len of string copy to the len of esc string
 2017-08-01 15:45:40 -05:00
Allen Byrne
f4e9bc21fa HDFFV-10256 add release note 2017-08-01 15:45:17 -05:00
M. Scot Breitenfeld
00d97d556b added test for NAG compiler and use the FC_BASENAME for NAG detection, (HDFFV-10037) 2017-08-01 15:44:55 -05:00
M. Scot Breitenfeld
2d932366b2 added test for NAG compiler and use the FC_BASENAME for NAG detection, (HDFFV-10037) 2017-08-01 15:33:43 -05:00
Allen Byrne
e1a81b17e0 HDFFV-10256 Add test 2017-08-01 13:52:10 -05:00
Allen Byrne
538e910368 HDFFV-10256 correct len of string copy to the len of esc string 2017-08-01 13:36:51 -05:00
Dana Robinson
464926f2a3 Merge pull request #621 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5pl_commit to develop 
* commit '9bcf8b2f2568083449ae3f9b6c2efbf6ed7f413a':
  Minor tweaks in response to code review.
  Fixed a failing Java plugin test.
  Major rework of H5PL package code before bringing VOL changes over.
 2017-08-01 11:02:41 -05:00
Scot Breitenfeld
80745c7508 Merge pull request #622 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit '6e551a270bde6214b0e533e9cd9e845d2f9f4789':
  Removed extra Fortran flags, (HDFFV-10037)
 2017-08-01 09:47:02 -05:00
M. Scot Breitenfeld
6e551a270b Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2017-08-01 08:46:31 -05:00
M. Scot Breitenfeld
cf2da9a3d3 Removed extra Fortran flags, (HDFFV-10037) 2017-08-01 08:46:23 -05:00
Dana Robinson
9bcf8b2f25 Minor tweaks in response to code review. 2017-08-01 04:59:36 -07:00
Dana Robinson
fd0d8738e0 Merge branch 'develop' into h5pl_commit 2017-08-01 04:12:03 -07:00
Vailin Choi
59e94f5009 Add h5repack tests for paged aggregation 
Add tests to h5repack.sh.in to verify options added for paged aggregation work as expected.
 2017-07-29 01:10:25 -05:00
Scot Breitenfeld
823f6a1333 Merge pull request #619 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit '668b90b96dcb237208dcedd63e0f2b7da8a0328c':
  Rearranged where the substitution occurs.
 2017-07-28 13:33:01 -05:00
M. Scot Breitenfeld
668b90b96d Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2017-07-28 09:07:01 -05:00
M. Scot Breitenfeld
c08ee77858 Rearranged where the substitution occurs. 
libtool does not pass the correct argument linking (-WL,-WL,,) for the
    NAG Fortran compiler on Linux (other OSs have not been tested).
    Therefore, detect if we are using the NAG Fortran compiler, and replace
    the wl="-Wl," for Fortran to wl="-Wl,-WL,," in the libtool file. (HDFFV-10037)
 2017-07-28 09:05:39 -05:00
Allen Byrne
6e03d114c2 Merge pull request #617 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '04d6a3ec3c91cb30dce5dd5abb1b67021527c2fb':
  if PARALLEL copy seconf file to PAR folder
 2017-07-27 15:27:24 -05:00