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94d14191fa
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812 Commits

Author SHA1 Message Date
Richard Warren
94d14191fa Change API names for get/set bitio_count. Also added H5_mpi_set_bigio_count to H5private.h. 2019-10-23 14:41:45 -04:00
Richard Warren
abb43d3d3a Remove debugging logic from the new t_bigio test 2019-10-08 15:03:13 -04:00
Richard Warren
06db420929 Expanded t_bigio.c to include Jordan's test from HDFFV-10539 2019-10-08 13:23:32 -04:00
Richard Warren
a97c0d418d At the suggestion of the PR reviewers, moved the mpio_create_large_type to H5mpi.c and renamed the function appropriately. Also moved some support functions to set and get the vvalue where we transistion to using derived datatypes. 2019-10-07 17:22:51 -04:00
Richard Warren
a074eeda11 Made code review edit suggested by Jerome, plus various code updates to files that I touched to eliminate compile warnings (on my Linux box). 2019-10-07 08:56:05 -04:00
Richard Warren
21a18a1cd2 Make the initial bug fixes to allow >2GB writes with Independent IO 2019-10-05 10:18:17 -04:00
Dana Robinson
fbb0728f54 Marked up H5Fget/set_mpi_atomicity() to use the VOL. 2019-09-26 19:13:13 -07:00
Vailin Choi
62750441cd Add comment to add tests later to verify conflicting values for MPI-specific properties on multiple opens. 2019-09-02 12:59:48 -05:00
Allen Byrne
1efd23ff02 Whitespace and HD prefix changes 2019-08-28 11:11:32 -05:00
Allen Byrne
43ff3fdc33 fix get gethostname for windows 2019-08-28 10:19:03 -05:00
Allen Byrne
a6df73c723 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'fb8296371cf45654a9252ed01b635519205da3de':
  Minor tweaks to new H5P MPI code based on code review feedback.
  Fixed a bug in the cache image code that was introduced by the HD changes.
  Added H5Pset/get_mpi_params calls and unified them with the MPI-I/O VFD info in H5FDmpio.c.
 2019-08-27 16:56:20 -05:00
Allen Byrne
09d13b3c13 OESS-29 Fix HD prefix in perform and enable test compile 2019-08-27 16:49:10 -05:00
Dana Robinson
477bd6cd77 Merge branch 'develop_minor_pr' into H5Pset_fapl_mpi 2019-08-27 13:28:55 -07:00
Dana Robinson
7dfe176924 Fixed a bug in the cache image code that was introduced by the HD 
changes.
 2019-08-27 13:26:22 -07:00
Dana Robinson
9a4f86997a Fixed typo from HD changes 2019-08-27 12:20:12 -07:00
Dana Robinson
89928e7c21 Merge branch 'develop' into H5Pset_fapl_mpi 2019-08-27 12:19:03 -07:00
Dana Robinson
3bcbce5538 Added H5Pset/get_mpi_params calls and unified them with the MPI-I/O 
VFD info in H5FDmpio.c.
 2019-08-26 10:26:31 -07:00
Allen Byrne
ba974c031d OESS-29 Update HD prefix mostly 2019-08-24 14:07:33 -05:00
Quincey Koziol
5d6f27b32b Merge branch 'develop' into shared_file_ptr 2019-08-21 15:36:17 -05:00
Dana Robinson
e747237a9c Removed unnecessary H5S_FRIEND and dead code. 2019-08-20 13:16:20 -07:00
Quincey Koziol
f285c76ef2 First pass of converting H5PB_* routines to use shared file pointers. 2019-08-19 18:48:06 -05:00
Allen Byrne
98c8c6e45b Mostly whitespace in testpar, addl changes for tmp dir 2019-08-15 10:28:40 -05:00
Quincey Koziol
5fe1216a4e Merge pull request #1819 in HDFFV/hdf5 from ~KOZIOL/hdf5:develop to develop 
* commit '905d40aa6f6eb603c5507e7967130760e3a2e43c':
  Fix return type for H5Sselect_intersect_block().
  Updated H5TRACE macro.
  Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, along with tests and minor cleanups and refactorings.
 2019-08-04 18:38:36 -05:00
Allen Byrne
0147a6c713 Fix VFD tests and repack 2019-08-03 17:28:50 -05:00
Scot Breitenfeld
bc1e6c5097 Merge pull request #1829 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit '4cb865fc5938a303c197aedf46f90021e2f4b3d6':
  enabled commented-out code
 2019-08-01 15:01:26 -05:00
M. Scot Breitenfeld
4cb865fc59 enabled commented-out code 2019-08-01 11:37:13 -05:00
Quincey Koziol
605889fde8 Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, along 
with tests and minor cleanups and refactorings.
 2019-07-30 15:34:53 -05:00
Allen Byrne
6a932198aa HDFFV-10529 Update CMake tests to use test fixtures 2019-07-23 16:24:56 -05:00
Allen Byrne
0a9180c074 HDFFV-10845 update mingw cmake changes 2019-07-17 16:08:43 -05:00
Allen Byrne
f724e86727 HDFFV-10845 use of TARGETFILE disables auto emulator 2019-07-17 11:58:04 -05:00
Allen Byrne
d586a457b2 HDFFV-10845 C_FLAGS need set correctly for win32 vs mingw 2019-07-17 11:58:02 -05:00
Allen Byrne
88ab4b144b fix var name 2019-07-09 12:07:41 -05:00
Allen Byrne
f241ff8ad9 Fix compile error with ifdef H5_HAVE_GETHOSTNAME 2019-07-08 15:50:14 -05:00
Dana Robinson
5aa8bc154d Fixed the heap overflow in t_filters_parallel 2019-06-21 14:13:16 -07:00
Dana Robinson
b4bd49ffdd Fixed some low-hanging fruit from -fsanitize in t_filters_parallel. 2019-06-21 13:18:09 -07:00
Allen Byrne
e7f16c6f2c HDFFV-10805 Add option to only build shared targets 
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
 2019-06-18 07:46:25 -05:00
Larry Knox
8a4f679fda Combine "collective group and dataset write" and "independent group and 
dataset read" tests into one test.  The second test is dependent on the
file created by the first test, and will not pass when run by itself.
 2019-05-03 16:08:22 -05:00
Allen Byrne
813d8fd597 Add final list of single testphdf5 tests 2019-05-02 16:20:15 -05:00
Allen Byrne
b6bebb245b Pull a test from default testphdf5 2019-05-02 12:07:37 -05:00
Allen Byrne
c643cc0531 Pull out another failing test 2019-05-02 10:27:49 -05:00
Allen Byrne
c030a7123d Correct var usage syntax 2019-05-01 14:46:27 -05:00
Allen Byrne
725f75baa7 Correct varname 2019-05-01 13:24:02 -05:00
Allen Byrne
e0de04d355 Separate out MPI tests that fail on MPI version 2019-05-01 12:31:55 -05:00
Vailin Choi
2886cd9e45 HDFFV-10365: Changes as described in the RFC: H5Sencode/H5Sdecode Format Change. 
This also addresses HDFFV-10255: H5Sencode/decode performance issue.
 2019-04-06 16:55:14 -05:00
Quincey Koziol
deeb302747 Specify the default VOL connector to use with an environment variable. 
This implicitly adds support for changing the VOL connector for command-line
tools or any application linked with the library.

Also, add 'make check-vol' support for all directories, clearing up necessary
issues in testing scripts, etc.
 2019-03-09 21:41:38 -06:00
Allen Byrne
122b63a5a2 HDFFV-10703 Update CMake commands to latest standard 2019-02-15 15:48:24 -06:00
Quincey Koziol
10cdff5ca4 Merge pull request #1540 in HDFFV/hdf5 from merge_hyperslab_changes_01 to develop 
* commit 'fb5d1a37c11bca613175a48262a2147e99c9dede':
  Align develop with incoming hyperslab_updates branch changes.
 2019-02-13 18:13:18 -06:00
Allen Byrne
b95f05638c TRILAB-111 fixes for parallel testing 2019-02-13 15:53:59 -06:00
Quincey Koziol
b5305b25a6 Align develop with incoming hyperslab_updates branch changes. 2019-02-12 21:51:15 -06:00
Jordan Henderson
34508f0620 Merge in latest from develop 2019-02-11 19:13:39 -06:00