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Author SHA1 Message Date
Jacob Smith
9103fd5953 Undo some formatting modifications. 
Update MANIFEST.
 2019-06-21 12:05:54 -05:00
Jacob Smith
27d5742b39 Merge branch 'develop' into bugfix/repack_external_storage 2019-06-20 12:37:27 -05:00
Jacob Smith
63fc460c13 Add forgotten files to include from h5repack testfiles for tests. 2019-06-20 12:30:20 -05:00
Jordan Henderson
2e973f7e12 Merge pull request #1754 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to develop 
* commit '6c62678939b66400247dbbf4f9d0c32381a956d1':
  Fix minor typo in H5S_select_iter_release
 2019-06-19 18:54:33 -05:00
Jordan Henderson
6c62678939 Fix minor typo in H5S_select_iter_release 2019-06-19 18:06:05 -05:00
Jacob Smith
2ba7b8f5e0 Fix failing automated reporting. 
Add 8-bit big-endian testfile.
 2019-06-19 17:15:05 -05:00
Jerome Soumagne
ca1ee7fae1 Merge pull request #1753 in HDFFV/hdf5 from ~JSOUMAGNE/hdf5:topic_fix_objcopy_leak to develop 
* commit '552cc1b4a4d1757d64f1b930135e0320a10ce8ce':
  Fix memory leak in objcopy test after H5Aread of vlen data
 2019-06-19 16:24:56 -05:00
Allen Byrne
cc267767af Merge pull request #1751 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '9397d67d91eb628b3b9096501cdab0a33335564c':
  HDFFV-10616 add h5fc script
 2019-06-19 14:03:44 -05:00
Jerome Soumagne
552cc1b4a4 Fix memory leak in objcopy test after H5Aread of vlen data 2019-06-19 14:03:21 -05:00
Allen Byrne
9397d67d91 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'b9ec6a6400a556b1250c249e158c4fffafccd550':
  fixed pass_through vol
 2019-06-19 13:55:27 -05:00
Scot Breitenfeld
b9ec6a6400 Merge pull request #1746 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit 'a67c578e4b9275fa12b427b6e13021536838a448':
  fixed pass_through vol
 2019-06-19 13:52:21 -05:00
Allen Byrne
d1b4eda28a HDFFV-10616 add h5fc script 2019-06-19 10:42:37 -05:00
Dana Robinson
4d20db43be Merge pull request #1750 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:ohdr_test_memory_issue to develop 
* commit '6a1e9a1fbe9606d0dd3452092cab17794e131e64':
  Fixed a problem in the ohdr test where hard-coded strings passed to H5Awrite() triggered -fsanitize failures.
 2019-06-19 10:23:04 -05:00
Dana Robinson
6a1e9a1fbe Fixed a problem in the ohdr test where hard-coded strings passed 
to H5Awrite() triggered -fsanitize failures.
 2019-06-18 17:28:37 -07:00
Dana Robinson
c6e21cede7 Merge pull request #1748 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:links_iterate_zero_bug to develop 
* commit '0a75da70a61d41a0bf20a5c617f3eb678ed0b103':
  Yanked qsort assert
  Switched to HGOTO_DONE() in the links code.
  Updated the HDqsort() macro to ensure we don't pass NULL buffers to qsort(3) in the future.
  Fixed a bug in the links code where iterating over an empty group would pass a NULL pointer to qsort(3), which is undefined behavior.
 2019-06-18 17:36:42 -05:00
Allen Byrne
8973ba46c6 Merge pull request #1745 in HDFFV/hdf5 from ~BYRN/hdf5_merge_adb:develop to develop 
* commit '6cd728796dee1cbc5b1fdf28900b23b7a6870b67':
  HDFFV-10805 Add option to only build shared targets
 2019-06-18 16:32:06 -05:00
Dana Robinson
0a75da70a6 Yanked qsort assert 2019-06-18 12:52:42 -07:00
Dana Robinson
b8c24388ec Switched to HGOTO_DONE() in the links code. 2019-06-18 12:27:51 -07:00
Dana Robinson
ea966597d5 Updated the HDqsort() macro to ensure we don't pass NULL buffers to 
qsort(3) in the future.
 2019-06-18 12:23:06 -07:00
Dana Robinson
d767e6a067 Fixed a bug in the links code where iterating over an empty group would 
pass a NULL pointer to qsort(3), which is undefined behavior.

Fixes HDFFV-10829
 2019-06-18 11:42:53 -07:00
Allen Byrne
6cd728796d Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '10535e0376d88e218cab782322bfc06f35835f31':
  Reset the other convenience pointer because why no
  Fixed a memory bug where a pointer is used after it's been freed.
 2019-06-18 13:42:03 -05:00
Dana Robinson
10535e0376 Merge pull request #1747 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:vds_memory_bug to develop 
* commit '8d67b440f7d94f1b191ce154a41685bcaa90fd12':
  Reset the other convenience pointer because why no
  Fixed a memory bug where a pointer is used after it's been freed.
 2019-06-18 12:52:27 -05:00
Dana Robinson
8d67b440f7 Reset the other convenience pointer because why no 2019-06-18 10:24:58 -07:00
Allen Byrne
d118a47a92 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '712a2a13d8add828d053135a172abb2e819d59ad':
  Fixed a warning in H5CX.c concerning incorrect use of freeing VOL connector info.
  Add H5S_SEL_ITER_SHARE_WITH_DATASPACE selection iterator creation flag, to share dataspace's selection with iterator (and with caution about not modifying or closing the dataspace while the iterator is open).
  Fix misc. typos, etc. from code review
  New hyperslab selection routines and new public selection iterator routines.
 2019-06-18 12:12:24 -05:00
Dana Robinson
daaa56de3e Fixed a memory bug where a pointer is used after it's been freed. 
This is going to need a release note when it's moved to 1.10.
 2019-06-18 09:59:36 -07:00
M. Scot Breitenfeld
a67c578e4b fixed pass_through vol 2019-06-18 11:39:21 -05:00
Dana Robinson
712a2a13d8 Merge pull request #1744 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:H5CX_warning to develop 
* commit '579793a7acebcb22d1adc2421a6c1b99618f3ee9':
  Fixed a warning in H5CX.c concerning incorrect use of freeing VOL connector info.
 2019-06-18 10:32:52 -05:00
Quincey Koziol
1802d4cb14 Merge pull request #1740 in HDFFV/hdf5 from merge_hyperslab_04 to develop 
* commit 'd20139399750246f55c902940987e0048a40c268':
  Add H5S_SEL_ITER_SHARE_WITH_DATASPACE selection iterator creation flag, to share dataspace's selection with iterator (and with caution about not modifying or closing the dataspace while the iterator is open).
  Fix misc. typos, etc. from code review
  New hyperslab selection routines and new public selection iterator routines.
 2019-06-18 09:39:00 -05:00
Quincey Koziol
d201393997 Merge branch 'develop' into merge_hyperslab_04 2019-06-18 09:24:14 -05:00
Allen Byrne
e7f16c6f2c HDFFV-10805 Add option to only build shared targets 
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
 2019-06-18 07:46:25 -05:00
Dana Robinson
579793a7ac Fixed a warning in H5CX.c concerning incorrect use of freeing 
VOL connector info.
 2019-06-17 20:09:45 -07:00
Quincey Koziol
49f14964c3 Add H5S_SEL_ITER_SHARE_WITH_DATASPACE selection iterator creation flag, to 
share dataspace's selection with iterator (and with caution about not modifying
or closing the dataspace while the iterator is open).
 2019-06-17 18:19:05 -05:00
Dana Robinson
f73a190d2c Merge pull request #1743 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:warnhist to develop 
* commit '72dd01b76bf0f521b95fc3ed10b5c305f7445fc6':
  Added a warning summary script for gcc to bin
 2019-06-17 15:57:46 -05:00
Dana Robinson
72dd01b76b Added a warning summary script for gcc to bin 2019-06-17 13:35:08 -07:00
Quincey Koziol
73331f73dd Fix misc. typos, etc. from code review 2019-06-17 10:45:36 -05:00
Quincey Koziol
0656cd47d9 Merge branch 'develop' into merge_hyperslab_04 2019-06-17 10:35:36 -05:00
Vailin Choi
f7c2a75404 Merge pull request #1729 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/HDFFV-10800-h5ocopy-failure to develop 
* commit 'dfdc27b04b2e8bcd1985ba90ce6553d8b3805fda':
  Fix release notes based on feedback from pull request.
  Fix for HDFFV-10800 H5Ocopy failure: The value for the H5F_LIBVER_V18 index in H5O_fill_ver_bounds[], the format version bounds array for fill value message, should be version 3 not 2.
 2019-06-17 10:28:58 -05:00
Dana Robinson
cbc95dee3c Merge pull request #1741 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to develop 
* commit 'dbad1589008e2ef9e713c712ca5ffbf7c97159d0':
  Fixed problem with H5Fdelete "test" and split VFD.
 2019-06-16 11:40:57 -05:00
Dana Robinson
dbad158900 Fixed problem with H5Fdelete "test" and split VFD. 2019-06-15 21:00:48 -07:00
Quincey Koziol
0525ee122f New hyperslab selection routines and new public selection iterator routines. 2019-06-15 21:25:28 -05:00
Dana Robinson
462b924eca Merge pull request #1739 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:aapl_test to develop 
* commit 'ad168f5a7a08f6afd9ee506ce7c884fff994002a':
  Added the creation and use of an attribute access property list to testhdf5.
 2019-06-15 17:25:01 -05:00
Dana Robinson
ad168f5a7a Added the creation and use of an attribute access property list to 
testhdf5.
 2019-06-15 12:44:36 -07:00
Larry Knox
68fb1c9f37 Merge pull request #1738 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit '6c3f90ae222a8d4e8d8edf172a6745028209b75c':
  Update MANIFEST for move of h5cc.in and h5redeploy.in to bin directory.
 2019-06-15 14:30:03 -05:00
Dana Robinson
c9d41341d6 Merge pull request #1713 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:vol_dev_headers to develop 
* commit '9ef56483f6447b60cf7568e2022aa5d8f193427c':
  Added missing DELETE enum value.
  Split VOL connector routines into separate headers: * H5VLconnector.h for terminal connector things * H5VLconnector_passthru.h for passthrough connector things
 2019-06-15 14:18:04 -05:00
Larry Knox
6c3f90ae22 Update MANIFEST for move of h5cc.in and h5redeploy.in to bin directory. 2019-06-15 12:34:07 -05:00
Dana Robinson
9ef56483f6 Merge branch 'develop' into vol_dev_headers 2019-06-14 14:18:06 -07:00
Larry Knox
d5a262c424 Merge pull request #1736 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit '04dc4ef436b087cfc45030b9183386598d1b4bae':
  Moved h5cc.in and h5redeploy.in from tools/misc to bin directory.  They should always be built and installed whether tools are enabled or disabled.  Also added Makefile.am to bin to build h5redeploy and to install and uninstall them.  h5cc is created from h5cc.in by configure.
 2019-06-14 15:20:45 -05:00
Dana Robinson
a2890b5d09 Added missing DELETE enum value. 2019-06-14 13:00:17 -07:00
Dana Robinson
278dc38530 Merge branch 'develop' into vol_dev_headers 2019-06-14 12:48:57 -07:00
Scot Breitenfeld
7b97bcf972 Merge pull request #1737 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit 'a0f9e97769e1aa4890b1481182f55b8373d431fa':
  fixed linked library for testing
 2019-06-14 14:43:09 -05:00