Commit Graph

1240 Commits

Author SHA1 Message Date
Allen Byrne
8e41b14811 [svn-r29601] Cleanup case of CMake commands in tools.
Update CTestCustom file for new tests.
Add connection from HDF5_ENABLE_USING_MEMCHECKER cmake option to library define USING_MEMCHECKER.
2016-03-31 09:02:24 -05:00
Allen Byrne
d9ab44fe46 [svn-r29557] Add comments to CMake macros and do append error file
revise_chunks rev 29556
2016-03-24 10:59:00 -05:00
Dana Robinson
5a9a9e8f0e [svn-r29534] Normalization w/ revise_chunks in preparation for big merge.
tools directory

Also fixes a minor Java test output error.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial w/ Java, Fortran, & C++
2016-03-23 12:42:06 -05:00
Allen Byrne
7f8f2feaf9 [svn-r29450] Separate error compare from output compare 2016-03-16 12:35:51 -05:00
Allen Byrne
b8d2f399fd [svn-r29427] Correct name of build option in script 2016-03-15 14:47:06 -05:00
Allen Byrne
4ed758aa3d [svn-r29404] correct filename in comment 2016-03-14 13:33:12 -05:00
Allen Byrne
4c4cc0fa09 [svn-r29402] Add Java option 2016-03-14 13:12:30 -05:00
Allen Byrne
85711b31d8 [svn-r29399] HDFFV-9717: add overview section to javadocs 2016-03-14 12:51:41 -05:00
Larry Knox
5938b81835 [svn-r29382] Change LT_VERS_* to 1000, 0, 0 for HDF5 1.10.0 release. 2016-03-09 15:14:16 -05:00
Larry Knox
f5234cd194 [svn-r29379] Add individual LT_VERS_* variables for wrapper libraries: c++, fortran, java, hl, hl/c++, hl/fortran to so that the shared object version numbers can be incremented independently.
Disabled auto-increment of shared object version numbers by h5vers.

Files modified:
    config/lt_vers.am
    java/src/jni/Makefile.am
    hl/src/Makefile.am
    hl/c++/src/Makefile.am
    hl/fortran/src/Makefile.am
    c++/src/Makefile.am
    bin/h5vers
    fortran/src/Makefile.am
2016-03-09 13:55:31 -05:00
Larry Knox
d380f20a0d [svn-r29350] Revert h5check_version change to check LT_VERS_XXXX numbers rather than HDF5 library version numbers.
Svn revisions reverted:  29341, 29326
Branch features/h5check_version was created for further development.

Files changed
     test/tcheck_version.c
     test/testcheck_version.sh.in
     src/H5public.h
     src/H5.c
     config/lt_vers.am
     bin/h5vers

Tested with h5committest.new
2016-03-08 12:49:38 -05:00
Allen Byrne
3fabbf45f0 [svn-r29348] Correct script process for options 2016-03-08 12:18:17 -05:00
Dana Robinson
a1035bd806 [svn-r29336] Removed unused variables from Fortran code.
Updated gnu Fortran flags.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ Fortran
2016-03-08 01:38:33 -05:00
Dana Robinson
b18aaf39f0 [svn-r29332] Removed -Wunreachable-code from the gnu C++ flags.
This flag generates a large number of spurious warnings in our code
so we've disabled it for now.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ C++
2016-03-07 22:27:46 -05:00
Albert Cheng
2c36685010 [svn-r29326] HDFFV-9536: Changed H5check_version() to use libtool shared library version numbers instead of the library version numbers.
bin/h5vers: 
    Changed to copy the shared lib version from lt_vers.am to H5public.h
    (Thanks to Larry who made the changes.)
config/lt_vers.am:
    cosmetic change, nothing material.

src/H5public.h:
    Changed by bin/h5vers.

src/H5.c:
    Changed H5check_version() to use shared library version for compatibility
    checking.

test/tcheck_version.c:
test/testcheck_version.sh.in:
    Changed to use shared library version numbers instead of the HDF5 library
    version numbers for testing.

Tested: tested in Jam (C only), platypus and osx1010dev (enable fortran and C++).
2016-03-07 17:03:57 -05:00
Dana Robinson
b99b5d494e [svn-r29325] Removed -Wmissing-declarations from the gnu C++ flags. It's not used for C++.
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ C++
2016-03-07 16:35:51 -05:00
Allen Byrne
53a381894e [svn-r29314] Add Java option 2016-03-07 12:25:46 -05:00
Dana Robinson
5fabfb6079 [svn-r29312] Removed -Wnonnull from the gnu C++ flags. It's not used for C++.
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ C++
2016-03-07 11:58:11 -05:00
Allen Byrne
3247df1224 [svn-r29301] Update valgrind cacheinit file to match regular. 2016-03-07 08:29:12 -05:00
Allen Byrne
6e7e6bb3aa [svn-r29266] Header generation default should be OFF.
For Trunk - cacheinit.cmake should enable it ON
2016-03-04 10:22:29 -05:00
Allen Byrne
c9ea243157 [svn-r29233] Add ARGN option for soversion arguments 2016-02-29 16:07:27 -05:00
Allen Byrne
63249be0e1 [svn-r29226] HDFFV-9552: merge in java code. 2016-02-28 21:43:00 -05:00
Allen Byrne
016ebfcdf2 [svn-r29198] Remove if condition for test mask situation 2016-02-24 09:55:14 -05:00
Allen Byrne
f74042d4e8 [svn-r29190] Add checking for *.err file before trying to read 2016-02-23 15:50:02 -05:00
Dana Robinson
b3df4e9c8d [svn-r29142] Updated the Intel files in config to use the new NO_SYMBOLS flags
and modified the failsafe configure flags in ibm-aix to use the
new scheme.
2016-02-17 13:15:58 -05:00
Dana Robinson
52705fa6f0 [svn-r29139] Updated PGI compiler files to set NO_SYMBOLS_CFLAGS/FCFLAGS and
moved the -s (strip symbols) option from the production flags to the
no symbols flags.

Tested on: platypus w/ PGI 15.7 (C, C++, Fortran)
2016-02-17 10:08:33 -05:00
Dana Robinson
d334af98c1 [svn-r29134] Updated config/solaris to use the latest configure option
and compiler flag scheme.

Tested on: Solaris 11.1 (emu) w/ SunPro 5.12 CC/FC/CXX
           autotools serial
2016-02-17 04:54:07 -05:00
Dana Robinson
77f2f1c132 [svn-r29131] Updated the GNU g++ compiler config file to use the new debug/
production, etc. system.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial - prod/debug w/ C++
2016-02-16 21:16:27 -05:00
Dana Robinson
ad0925c214 [svn-r29129] Added NO_SYMBOLS_CFLAGS, etc. to allow stripping symbols when
--disable-symbols is specified and to ensure that production
mode (where symbol stripping is usually a part of the FLAGS)
doesn't conflict with --enable-symbols. This will allow better
(though still limited) debugging of production/optimized code.

The PGI, XLC, Intel, and Solaris files were not modified and
do not generate the symbol removal flag at this time. They'll
be updated in future check-ins. In the meantime, production
mode on those platforms still usually strips symbols.

This check-in also updates the Cygwin-specific files to use
the new autotools FLAGS and option scheme when uncommon
(non-gnu, etc.) Fortran compilers are used.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial (prod/debug w/ and w/o symbols)
           symbol presence/absence checked with objdump
2016-02-16 20:09:04 -05:00
Dana Robinson
e7c1236543 [svn-r29090] Changed "smart quotes" to ASCII ' and " in r28960 code.
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools parallel (MPICH 3.1.4)
           CMake serial (CMake 3.3.2)
2016-02-11 14:37:14 -05:00
Dana Robinson
2fb4f0b35e [svn-r29023] Fixed typos in symbols flags that prevented using -g, etc.
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial autotools
2016-02-01 14:28:38 -05:00
Dana Robinson
1454a45826 [svn-r28996] Autotools configure updates to allow separation of build type, debug
symbols, asserts, profiling, and optimization.

Also much refactoring, improved help, and --enable-<foo> options will
now emit errors on nonsense (e.g.: --enable-foo="asdfasdf").

The libhdf5.settings.in file was also reformatted.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial and parallel autotools w/ various options
2016-01-27 16:45:23 -05:00
Dana Robinson
7abd70b809 [svn-r28990] Removed spurious BIND() warnings from Fortran.
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial autotools w/ Fortran
2016-01-27 14:12:38 -05:00
Dana Robinson
20a3462089 [svn-r28977] Added autotools g++ compiler flags/warnings file to config/
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ C++
2016-01-27 01:23:40 -05:00
Dana Robinson
8bbdc947c4 [svn-r28972] Removed option to clear file buffers from autotools, CMake, and library.
Buffers that will be written to disk will now always be cleared since
not doing this has huge security implications.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0, x86_64) gcc 5.2.1
           serial autotools
           parallel autotools (MPICH 3.1.4)
           serial CMake
2016-01-26 16:26:12 -05:00
Dana Robinson
8aa7c27fb7 [svn-r28963] Updated the gnu Fortran configure files to set flags when the gnu compiler
is used. The gnu-fflags file was never included.

Tested on ostrich
2016-01-23 19:34:29 -05:00
Larry Knox
0d714830a8 [svn-r28960] Fix for HDFFV-9439
Escape quotes in fortran version output to find fortran version for libhdf5.settings

Tested with buildhdf5 on platypus, ostrich, moohan and mayll.
2016-01-22 13:18:04 -05:00
Quincey Koziol
f017eb6fc0 [svn-r28777] Description:
Add --enable-memory-alloc-sanity-check option to configure, to track and
sanity check memory allocations within the library.  This is orthogonal to the
--enable-using-memchecker option and can be used with/without it.

Tested on:
    MacOSX/64 10.11.2 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-01-03 17:06:52 -05:00
HDF Tester
6d8b831b31 [svn-r28730] Snapshot version 1.9 release 233 2015-12-27 23:20:23 -05:00
Dana Robinson
f53c939bd0 [svn-r28581] Brought flock changes over from revise_chunks as well as a few
minor tweaks from H5private.h.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial only, autotools and CMake (3.3.2)
2015-12-11 03:19:10 -05:00
Dana Robinson
af371007e8 [svn-r28538] Merge of r28479 from revise_chunks.
Fixes OS X compilation problems and brings some Linux symbols in
line with the Autotools when building with CMake.

Tested on: 64-bit OS X 10.11.1 El Capitan (Darwin 15.0.0)
           Xcode 7.1 Apple LLVM 7.0.0 (clang-700.1.76)
2015-12-08 15:49:12 -05:00
Dana Robinson
8de50ab664 [svn-r28463] Merge of -r28460 from revise_chunks. Removes -std=c99 from
C++ flags under CMake.

Tested on: Ubuntu 15.10 (x86_64 Linux 4.2.0)
    gcc 5.2.1, CMake 3.3.2
2015-11-24 14:29:21 -05:00
Allen Byrne
54aa68df1a [svn-r28403] Update to include cdash submit options 2015-11-19 13:32:41 -05:00
Jerome Soumagne
7791549252 [svn-r28188] Fix inline/__inline__/__inline detection with CMake after autotools changes 2015-10-22 11:23:01 -05:00
Allen Byrne
37ed7e8b5f [svn-r28184] correct import targets 2015-10-22 10:47:29 -05:00
Allen Byrne
aa4284b2a3 [svn-r28174] HDFFV-9550: Add VS2015 fix for timezone. 2015-10-21 16:22:06 -05:00
Allen Byrne
7d34c32445 [svn-r28160] Update comment about VS versions 2015-10-21 11:28:17 -05:00
Allen Byrne
78c820b1ee [svn-r28158] Merge from CMAMKE_EXT_MOD repo.
Add VS2015 support.
2015-10-21 10:44:41 -05:00
Allen Byrne
83d7feb63c [svn-r28154] Correct define vs variable usage 2015-10-20 17:13:26 -05:00
Allen Byrne
6a6e921d2f [svn-r28152] Correct define vs variable usage
Add VS2015
2015-10-20 17:11:10 -05:00