Commit Graph

13338 Commits

Author SHA1 Message Date
Scot Breitenfeld
17fd0e9ce4 [svn-r23088] Changed Fortran examples to reflect changes in documentation via Barbara;
mainly program name changes. Two new examples added: h5_extend.f90 h5_subset.f90 and
example fileexample.f90 was removed.

Tested: jam (gnu compilers)
2012-12-10 17:30:38 -05:00
Raymond Lu
fc9ed51a3a [svn-r23087] I updated MANIFEST to include the new files hl/src/H5DO.c, H5DOpublic.h, H5DOprivate.h. I included H5DOpublic.h into hl/src/hdf5_hl.h.
Tested on koala.
2012-12-10 14:08:30 -05:00
HDF Tester
f89d080191 [svn-r23085] Snapshot version 1.9 release 136 2012-12-09 11:14:57 -05:00
Allen Byrne
f45283113b [svn-r23083] Correct cmake statement to use SET instead of ADD_DEFINITIONS 2012-12-07 12:19:31 -05:00
Raymond Lu
c409265f9d [svn-r23082] I corrected an error for test_dectris.h5.
Tested on jam.
2012-12-06 14:48:50 -05:00
Raymond Lu
b7e1b629e9 [svn-r23081] ported revisions 22987 to 23080 from the trunk 2012-12-06 11:02:01 -05:00
Raymond Lu
6b1ef6ad02 [svn-r23079] I updated CMakefile for adding H5DO.c and H5DOpublic.h under hl/ directory.
Not test.
2012-12-05 16:11:49 -05:00
Raymond Lu
8f3a8710ca [svn-r23078] I took out O_SYNC flag from the code. I used it to do performance test. But
we decided not to support it.

Tested on koala.
2012-12-05 15:15:54 -05:00
Raymond Lu
bbeea7dd99 [svn-r23077] I adjusted the dataset and chunk to smaller sizes.
Tested on koala.
2012-12-05 11:57:30 -05:00
Raymond Lu
0c4cec81b2 [svn-r23075] I revised the code and test according to Quincey's review. I also added more test cases.
Tested on koala.
2012-12-04 14:47:35 -05:00
HDF Tester
0de4e03305 [svn-r23071] Snapshot version 1.9 release 135 2012-12-02 09:57:47 -05:00
Allen Byrne
5697dc8f80 [svn-r23066] HDFFV-8265: create .def file during configure, added F2003 optional functions and refactor ISO_C_BINDING usage in cmake files
Tested: local cmake
2012-11-29 09:50:21 -05:00
Allen Byrne
c7440f2f36 [svn-r23064] HDFFV-8202: Add diff display to cmake output on error. Merged changes from runTest.cmake. 2012-11-28 16:37:37 -05:00
Allen Byrne
b3c12e8d55 [svn-r23057] HDFFV-8265: create .def file during configure
Tested: windows
2012-11-27 10:53:30 -05:00
Albert Cheng
19a00efd98 [svn-r23055] Bug fix: HDFFV-8233
testh5stat.sh fails in LLNL uDawn. The test actually ran as expected
but it did not prepare for the extra error messages from the MPI
process.

Solution:
This sort of problem has been fixed by using the output filters in
output_filter.sh. testh5stat.sh is updated to use the output filters.

Tested:
uDawn.
2012-11-26 15:45:17 -05:00
Allen Byrne
e5d4ba944f [svn-r23053] Remove deleted file from CMake build list 2012-11-26 08:56:29 -05:00
Scot Breitenfeld
e53f4cce8a [svn-r23052] Description:
Removed example grpit.f90 which used undocumented/obsolete APIs, The equivalent and up-to-date example
to transverse through a file would be the example h5ex_g_traverse_F03.f90 in hdf5-examples.
2012-11-25 22:08:02 -05:00
HDF Tester
48b241d52d [svn-r23050] Snapshot version 1.9 release 134 2012-11-25 09:47:11 -05:00
Quincey Koziol
a20adf6924 [svn-r23048] Description:
Bring r20456 from Coverity branch to trunk:

fixed coverity 678, 679

Tested on:
    Mac OSX/64 10.8.2 (amazon) w/debug
    (too minor to require h5committest)
2012-11-21 17:25:46 -05:00
Allen Byrne
b1439fa810 [svn-r23044] Restore build configuration defines for cmake 2012-11-21 10:05:49 -05:00
HDF Tester
9ac4fea3b0 [svn-r23039] Snapshot version 1.9 release 133 2012-11-18 09:57:04 -05:00
Allen Byrne
670fb1977b [svn-r23038] Corrected last array assignment to use X-1 values for index. 2012-11-16 09:13:55 -05:00
Allen Byrne
b06253f597 [svn-r23037] Correct string variable handling/reference
Tested: local and windows
2012-11-16 09:03:49 -05:00
Allen Byrne
4e2e8d118c [svn-r23036] HDFFV-8202: cmake compare should show differences in log output
Tested: local linux
2012-11-15 16:18:17 -05:00
Allen Byrne
b23a2aebf0 [svn-r23035] Add scalar string test file and tests 2012-11-15 12:21:18 -05:00
Allen Byrne
3e7f74caf1 [svn-r23034] Add scalar string test file and tests 2012-11-15 12:20:05 -05:00
Albert Cheng
061f0b454c [svn-r23032] Updated the following sections with information from the v1.8 branch.
Supported Platforms
Tested Configuration Features Summary
More Tested Platforms
2012-11-14 13:10:03 -05:00
HDF Tester
82868270dc [svn-r23021] Snapshot version 1.9 release 132 2012-11-11 09:56:57 -05:00
Allen Byrne
a177131e71 [svn-r23020] HDFFV-498: lone colon test fails on cygwin and leaves a.exe file on system. Added test for CYGWIN and use a,exe instead of a.out.
Review: HHDF5-1-8-31

Tested: cygwin
2012-11-09 15:27:03 -05:00
Raymond Lu
6192c80307 [svn-r23019] I added dectris_hl_perf.c for testing performance.
Tested on koala.
2012-11-07 16:59:43 -05:00
Raymond Lu
e9a9c23a6d [svn-r23018] I forgot to add these new files in previous commit. 2012-11-07 12:11:22 -05:00
Raymond Lu
b7041a91cd [svn-r23017] I added a prototype function H5DOwrite_chunk in HL library for Dectris people to test performance. The library's API function H5PSIdirect_write
is still in.  I reorganized the internal library by adding H5D__pre_write function.

Tested on koala.
2012-11-07 12:08:46 -05:00
Allen Byrne
ee27a10d49 [svn-r23015] Update windows platforms 2012-11-06 13:54:08 -05:00
Raymond Lu
c5d62ca899 [svn-r23012] I added Sun's 5.9 C++ compiler problem as a known problem. It doesn't know a C99 predefined identifier __func__. 2012-11-05 15:29:31 -05:00
Quincey Koziol
308171a2ef [svn-r23010] Description:
Initialize cd_values pointer when cd_elemts is zero.

Tested on:
    Mac OSX/64 (amazon) w/debug
    Windows (via Allen's builds)
2012-11-05 13:21:11 -05:00
Quincey Koziol
b9d042d2d2 [svn-r22998] Description:
Clean up warnings and bring changes from Coverity branch back to trunk:

r20451:
Fixed coverity 810

r20454:
Purpose: Fix coverity issue 816

Description: Modified various file drivers to always check the return value from
H5P_get_driver_info.

r20455:
Purpose: Cleanup fix for coverity issue 816

Description: Removed redundant check for "fa" in H5FD_core_open.


Tested on:
    Mac OSX/64 10.8.2 (amazon) w/debug
    (Too minor to require h5committest)
2012-11-01 11:01:37 -05:00
Jonathan Kim
51c5bf8aa7 [svn-r22992] Purpose:
HDFFV-8146 - Remove "multi-chunk IO without optimization" sub-feature from MPI I/O optimization for chunked dataset feature

Description:
  The “multi-chunk IO without optimization” feature is removed and made the related xfer property (H5FD_MPIO_CHUNK_MULTI_IO) go directly to “multi-chunk-io” feature.
  Also update/fix/cleanup testings (chunk collective IO and actual chunk opt mode) accordingly.
    
Tested: 
    jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), fred (mac64-LE), Windows (32-LE cmake), cmake (jam)
2012-10-30 11:28:17 -05:00
Raymond Lu
0cf58a4755 [svn-r22987] ported revisions from 22742 to 22986 from the trunk 2012-10-29 13:59:05 -05:00
Larry Knox
57d23e5062 [svn-r22984] Removed references to windows files for legacy builds with Visual Studio that were removed.
Tested on jam.
2012-10-27 22:39:07 -05:00
Dana Robinson
88885a82ae [svn-r22953] Purpose:
Removed legacy Visual Studio solutions and projects, which will
	no longer be supported after HDF5 1.8.10.
2012-10-23 13:27:33 -05:00
Raymond Lu
e96bb5fed1 [svn-r22951] I added an item in the new feature about the conversion from enumeration to numerica datatypes. 2012-10-23 12:06:59 -05:00
Raymond Lu
e00ffb3e51 [svn-r22945] I fixed a few minor casting problems in enum.c. It's a followup commit for the test of the conversion function H5T__conv_enum_numeric (numeric type means integer or floating number).
Tested on tejeda - failed on tejeda and ostrich in the daily test.
2012-10-22 14:46:03 -05:00
Mark Evans
29dec8ea7c [svn-r22943] Changed the spelling of accessability to accessibility. 2012-10-22 11:39:27 -05:00
Dana Robinson
fe00929980 [svn-r22936] Purpose:
Reorganize Windows release docs

Tested on:
	N/A (docs only), ran chkmanifest
2012-10-21 21:51:48 -05:00
Quincey Koziol
8430e2d4de [svn-r22935] Description:
Clean up a few warnings and minor code issues during review of enum ->
int/float conversion changes.

Tested on:
    Mac OSX/64 10.8.2 (amazon) w/debug
    (too minor to require h5committest)
2012-10-20 22:44:32 -05:00
Jonathan Kim
961a24ac3c [svn-r22933] Purpose:
HDFFV-8145 h5diff slowness with version >= 1.8.7

Description:
    Improved speed when comparing HDF5 files with lots of attributes. Much slower performance was identified with release version from 1.8.7 to 1.8.10 compared to 1.8.6.
    
Tested: 
    jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), Windows (32-LE cmake), cmake (jam)
2012-10-19 16:28:14 -05:00
Quincey Koziol
14e7962b30 [svn-r22932] Description:
Update FreeBSD info.
2012-10-19 14:57:04 -05:00
Quincey Koziol
e9519f5e6a [svn-r22921] Description:
Review Coverity changes and bring them back to trunk. (QK & JK)

r20402:
Added #includes for h5tools.y or h5tools_utils.h as required to remedy implicit
function declarations which caused compiler warnings and coverity issues 703-4
and 708-11.

r20414:
This is related to the previous checkin r20399.  There were incorrect updates
which caused incorrect behavior when no file was given. Also possible segfault
when handling hyperslab options. Simplify the code changes.

r20449:
Description: Modified H5E_walk2_cb to check return value of H5I_object_verify.

r20450:
fixed coverity 813


Tested on:
    Mac OSX/64 10.8.2 (amazon) w/C++, FORTRAN, debug & threadsafe
    (too minor to require h5committest)
2012-10-18 14:47:39 -05:00
Quincey Koziol
0324f05566 [svn-r22915] Description:
Bring Coverity changes back to trunk:


r20399:
Change parse_command_line to free hand structure on error and only "leave()" at end of main.

r20400:
Purpose: Fix coverity issue 592

Description: Added void cast to call to H5F_sfile_assert_num() in
H5F_term)interface().  There is no need to check the return value of this
function in general, and there would be nothing to do even if it did fail.

r20401:
Added free(src_sizes) and free(src_offset). --gh


Tested on:
    Mac OSX/64 10.8.2 (amazon) w/C++, FORTRAN, threadsafe
    (too minor for h5committest)
2012-10-17 13:41:42 -05:00
Raymond Lu
1c45b31cc6 [svn-r22914] I checked in the conversion function H5T__conv_enum_numeric (numeric type means integer or floating number) and the C test for it. This is the work for Chicago.
Tested on jam, koala, and ostrich.
2012-10-17 13:38:38 -05:00