Description: Function prototype H5E_walk_t and structure H5E_error_t wasn't backward
compatible.
Solution: Make them compatible with v1.6 and provide new definitions of H5E_walk_stack_t
and H5E_error_stack_t.
Platforms tested: fuss and h5committest.
Purpose: Bug fix for VMS
Description: I am not sure why I didn't see this bug before ;-O.
H5_HAVE_FILE_VERSIONS macro was added (by me) to the wrong place
causing test program to get creation property list from a non-existing
file object. As a result test program failed with access violation
error.
Solution: Fixed.
Platforms tested: VMS server and copper (just in case)
Misc. update:
Description:
dsets.cpp: added a missing PASSED call to line up output better.
tattr.cpp: casted parameters to verify_val properly to fix compilation
errors on Windows, introduced from the previous checkin.
Platforms tested:
Linux 2.4 (heping) - very minor
Windows XP
Several bug fixes
Description:
Added config file for Cray X1 (previous file was misnamed)
Simplified some code in hyperslab.c test that seemed to have been
confusing compiler on Cray X1.
Fixed typo in config/commence.am
Cleaned up hl/src/Makefile.am
Solution:
All four fixes should be straightforward. The failure on Cray was
very difficult to debug, but involved arithmetic errors.
This change seems to fix it.
Platforms tested:
heping, copper, sol, some Cray X1 (more testing when system comes back up)
Description:
The file size test in C++ library failed on Copper because the
value returned by h5_get_file_size was intepreted incorrectly
due to different interger sizes.
Solution:
H5private.h: Added check to use stat64 and off64_t where appropriate.
h5test.c and h5test.h: used h5_stat_size_t in place of off_t.
tattr.cpp: used h5_stat_size_t in place of off_t.
Platforms tested:
Linux 2.4 (heping)
AIX 5.1 (copper)
SunOS 5.8 64-bit (sol) - still on going
Description: "using std::count" statement caused the problems on copper and kelgia
Solution: I believe this statement is not needed at all (will verify with
more daily tests and Binh-Minh). Removed.
Platforms tested: heping, mir with Intel compiler, copper with -q64,
shanti (there is a known failure in tatrr test)
Misc. update:
Anti-feature
Description:
Revert changes to H5G_stat_t struct, to make it compatible with the 1.6.x
branch again. The information that was added to the H5G_stat_t struct will
be reported through other API routines.
Platforms tested:
FreeBSD 4.11 (sleipnir) w/C++
Linux 2.4/64 (mir) w/C++ & Fortran
Solaris 2.9 (shanti)
Description: Brought VMS changes back. My previous note about
using std::count; should be in this log.
C++ on VMS doesn't support "using std::count"
Solution: IFDEF'ed with H5_VMS (until Binh-Minh has a chance to look into it and
propose a different solution)
Platforms tested: VMS server, heping
Misc. update:
Description: Brought VMS changes back (very minor):
In tfile.cpp file some tests for open and creation should fail on UNIX,
but this is not true on VMS since it has versioning of the files.
In dsets.cpp std::count was used, but it is not available on VMS; also
VMS didn't like "bogus" name for the filter function.
Solution: Used H5_HAVE_FILE_VERSIONS and H5_VMS variables to control the tests;
replaced "bogus" function with "filter_bogus" function
Platforms tested: VMS server, heping
Misc. update:
new feature
Description:
1) separated the HL library into "public" and "private" header files, with the same caracteristics as the basic library
2) added the public headers to hdf5.h (with a conditional include macro, defined in configure.in)
3) added the path to HL in all Makefile.am 's , because of the inclusion in hdf5.h
Solution:
Platforms tested:
linux 32, 64
AIX
solaris
with fortran and c++
(one packet table example fails)
Misc. update:
Code cleanup
Description:
Clean up some runtime errors from unsupported C99 types on Solaris 2.9
by wrapping them with ifdef's.
Platforms tested:
FreeBSD 4.11 (sleipnir)
Linux 2.4 32-bit (heping)
Linux 2.4 64-bit (mir)
Solaris 2.9 (shanti)
Misc. update:
Description:
Changed to alias string instead of std, i.e. H5std_string instead
of H5std, because the old way wasn't working when std didn't exist.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
HPUX 11.00 (kelgia) - this was the problematic platform but I wasn't
able to test before.
Description:
Changed to alias string instead of std, i.e. H5std_string instead
of H5std, because the old way wasn't working when std didn't exist.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
HPUX 11.00 (kelgia) - this was the problematic platform but I wasn't
able to test before.
Description:
Changed to alias string instead of std, i.e. H5std_string instead
of H5std, because the old way wasn't working when std didn't exist.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
HPUX 11.00 (kelgia) - this was the problematic platform but I wasn't
able to test before.
Description:
Corrected syntax for aliasing H5_std in the case of no std.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
Still couldn't test on kelgia; I'll check daily test tomorrow.
Description:
Added alias H5_std so either the global or std namespace can be
used, depending on H5_NO_STD.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
AIX 5.1 (copper)
Bug fix
Description:
Previous checkin did a bad thing; 'make clean' failed in example directories.
Solution:
Fixed commence.am so that examples no longer break, and fixed a mistake
in conclude.am.
Platforms tested:
heping (minor makefile change)
Misc. update:
Bug fix
Description:
make check-clean didn't clean results of example tests
Solution:
Fixed Makefiles so that check-clean recurses into example directories.
Also a little Makefile cleanup.
Platforms tested:
mir, modi4, heping, copper
Description: There was no macro name in ifdef statement
(it was commented out ;-))
Solution: Fixed the typo
Platforms tested: tested on heping with g++
Misc. update:
Description: insert method didn't work for VMS.
Solution: Used append methos to form the string; this may become the change
for all platforms after more testing
Platforms tested: heping, VMS server
Misc. update:
New feature.
Description:
Added the feature to make a release tarball for the documents tree too.
Platforms tested:
Feature code was created by James. I just did some touch up and
tested it by hand in heping. I am checking it in while he is absent.
Misc. update:
Description:
Removed the call to h5_test from dsets.cpp, since resetting
the library made the C++ global constants become invalid.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
Description:
Added missing member function H5File::flush
Fixed parameters passed to H5Awrite
Other typos
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
Added high-level example directories
Description:
Refactored common code out of examples Makefiles.am, added high-level
example directories, added packet table examples.
Solution:
Examples now draw from a common config/examples.am file, which
contains rules for installing, uninstalling, and cleaning examples.
High-level example directories are mostly empty, except for the
C and C++ packet table tests.
Platforms tested:
mir, sleipnir, copper, shanti
Code cleanup
Description:
Fix a bunch of warnings flagged by Windows compilers.
Platforms tested:
FreeBSD 4.11 (sleipnir)
Too minor to require h5committest
Description:
Added member function H5File::openFile and overloaded for convenience.
Added overloaded getObjinfo to skip the middle parameter.
Changed
StrType(const size_t& size);
to
StrType(const int dummy, const size_t& size);
because the first one clashed with
StrType(const hid_t existing_id);
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
HPUX 11.00 (kelgia)
Description:
There was a workaround for predefined types, in the C++ library,
implemented when the C++ library was handling the reference
counting of the object ids on its own. Currently, the C++ library
is using the available APIs from the C library for that purpose,
and there were bugs reported involving that part of the C++ library.
So, I decided to remove the workaround completely.
Also, improved the use of std members.
Platforms tested:
Linux 2.4 (heping)
SunOS 5.8 64-bit (sol)
Linux 2.4 w/PGI (colonelk)
Bug fix
Description:
Fortran type generation was broken in two ways. Fixed both.
Solution:
Firstly, there were a couple of path problems. Fixed a typo and
specified the full path of a file.
Secondly, the dependencies weren't right when building with HDF5-specific
commands (make lib, make check-s, etc.). Tweaked dependencies
to fix the problem.
Platforms tested:
mir, modi4, sleipnir
Configure feature
Description:
Added 'make trace' target.
Solution:
Added tracing to 1.7. This was done automatically in 1.6, but left out
of 1.7 until now (oops!).
Tracing in 1.7 only happens manually, when the user types 'make trace.'
Tracing automatically requires more framework than it's worth.
I also fixed a couple of tracing bugs and ran trace.
Platforms tested:
mir, sleipnir, modi4
Misc. update:
Bug fix
Description:
Before this checkin, 'gmake check-s' would fail if there was a file in
the current directory named 'check-s'.
This is fixed under gmake (not sure how to fix for other makes).
Solution:
check, progs, install, etc. are what gmake calls "phony" targets,
which means that no file should be created. These targets can be
specified by a line of the form
.PHONY: check progs install ...
Automake adds this line for targets it knows about, but HDF5 has a
lot of custom rules. This checkin adds a .PHONY line for those rules.
I believe that only gmake recognizes the .PHONY line (at least, pmake
doesn't seem to), but a partial solution is better than none.
This error should occur very rarely anyway (the user has to manually
create files with names like 'build-check-s' or '_test').
Platforms tested:
mir, sleipnir, modi4
Bug fix
Description:
Fixed a bug when using h5fc and h5c++ with static libraries.
Added high-level C++ and Fortran libraries to h5c++ and h5fc.
Solution:
Platforms tested:
mir, heping, shanti, sleipnir
Bug fix/feature
Description:
Added support for -shlib in h5fc and h5c++.
Made check-install use -shlib when only shared libraries have been installed.
Solution:
h5fc and h5c++ didn't recognize -shlib. Stole code from h5cc to link against
shared libraries.
When static libraries are disabled, the examples Makefiles will automatically
use the -shlib option to link against shared libraries. Thus,
--disable-static and make check-install should work together.
Platforms tested:
heping(disable-static, enable-static, fortran, c++), modi4 (disable-static, fortran, c++, parallel, enable-static)
Update copyrights.
Description:
Solution:
This should address almost all of the "simple" cases in the repository.
There's still work to do, but it's going to require actually thinking about
the files in question instead of just copying & pasting.
Bug fix
Description:
Failed parallel tests now cause make to exit with an error.
Solution:
Edited config/conclude.am to throw an error if parallel test programs fail.
Platforms tested:
heping, modi4
Update copyrights
Description:
Updated copyright information in hdf5/bin and top-level and added some
more files to be skipped to the chkcopyright config file.
Platforms tested:
None - just eyeballed
Bug fix
Description:
Changed configure.in to use an environment variable TR to set the path
to the tr utility.
Solution:
There are two kind of tr on Solaris with slightly different syntax.
HDF5's configure relies on the "standard" tr. Traditionally, HDF5ers
have needed to make sure that the "right" tr was found before the
wrong one in their path; now they can use an environment variable.
Platforms tested:
mir, shanti, sol
Misc. update:
Forgot to update release notes. Off to do that now.
Makefile bug fix
Description:
Previously, automake didn't output rules to build perform/mpi-perf or
the test/gen_* programs.
Now these can be built by typing 'make mpi-perf' (or 'make foo') or by
configuring with --enable-build-all.
Solution:
Automake doesn't like having rules for programs it doesn't build. Tricked
it by having these programs built "sometimes"--whenever the user enables
--build-all. This should be used mostly for testing and to ensure that
these helper programs compile.
***IMPORTANT***
These programs do *not* currently compile. When --enable-build-all is used
(not the default), gen_new_fill fails because it uses an old API. This is
an existing "bug" that has simply been exposed by this checkin.
Platforms tested:
sleipnir, modi4, sol
Misc. update:
bug fix.
Description:
When a parallel test script test fails, make would continue because the
way it was setup inside a for loop. Fixed it by issuing an exit 1 inside
the loop.
There was also a typo error in the newer command comparision that it
must be $${chkname} in order to be valid. Also, the test script itself
was not checked in the newer lists. All fixed.
Platforms tested:
h5committested and also hand tested in heping pp mode.
Description:
I couldn't get the HDF logo to appear, when the location for the
html files generated by doxygen is arbitrary. This arbitrary
directory doesn't contain the logo image file, which would be
placed in a planned directory.
The logo is removed now, but the image file is kept in the CVS
under hdf5/c++/src, just in case when I can find a solution.
Platforms tested:
Linux 2.4 (heping)
Windows XP
Misc. update:
New feature.
Description:
Added the time command to the make check target to report time usage
of the execute of each test and test scripts. This gives us some idea
how long each test takes and some vague idea it is compute bound or
not.
powerpc-ibm-aix5.x:
Change $RUNPARALLEL default setting to allow it being invoked by the
time command.
Platforms tested:
h5committested.
Feature
Description:
Added H5_CFLAGS, etc. to 1.7 branch.
Now compilation flags can be put in H5_*FLAGS and they'll be used when
building hdf5 but not in h5cc.
Platforms tested:
mir, sleipnir, modi4
Misc. update:
