Commit Graph

385 Commits

Author SHA1 Message Date
Allen Byrne
12fd139e90 Update reference files and fix int as string 2019-12-03 14:43:05 -06:00
Allen Byrne
8888cfd25c Update to new error text 2019-12-02 14:58:57 -06:00
Allen Byrne
929490f6bc Update reference files to latest output 2019-12-02 12:01:40 -06:00
David Young
0108072f7a Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings level and fixing some code.' (commit 5c911d8baf)" 2019-11-27 11:26:02 -06:00
David Young
aa0f3cb1a8 Delete an unused variable. 2019-11-13 11:25:51 -06:00
David Young
2dd5bbfe16 Merge pull request #1984 in HDFFV/hdf5 from ~DYOUNG/netbsd:develop to develop
* commit '0b721858e46a317c370a24115032d5be41688f67':
  Make these scripts relocatable again: derive a relative path for the original installation prefix from the examples prefix.  Use that relative path to locate the current installation prefix, always.  Fall back to an absolute installation prefix if the relative path cannot be derived.
  Get the path to prefix right: needs a ../ to back out of subdirectory c/.
  Make this script relocatable again: derive a relative path for the original installation prefix from the examples prefix.  Use that relative path to locate the current installation prefix, always.  Fall back to an absolute installation prefix if the relative path cannot be derived.
  Let us override the examples directory using --with-examplesdir=DIR. This is handy for NetBSD where HDF5 examples are installed by convention in $prefix/share/examples/hdf5/ rather than in ${prefix}/share/hdf5_examples/, which is the HDF5 default.
  Follow longstanding execv convention for compatibility with NetBSD.
  Under the examples directories, always find the installed HDF5 executables and scripts using @prefix@ instead of a relative path, because the number of ../ in the relative path will be different on NetBSD than on other systems.
  Make the HDF5 configure script grok NetBSD.
  For portability, insulate the HDF5 library from some system macros.
  Not every system has perl installed in /usr/bin/, so change the shebang (#!) line to `/usr/bin/env perl` to locate perl on the PATH.
  For portability, use the POSIX sh(1) string-comparison operator `=` instead of `==`.
2019-11-05 15:36:09 -06:00
Allen Byrne
9affb7f12e Fix MPI test depends 2019-10-23 14:49:05 -05:00
Allen Byrne
685956cd4c Update format and fix missing prefix 2019-10-21 09:38:37 -05:00
Larry Knox
78268762bc Improvements in response to Allen's suggestions. 2019-10-09 11:04:15 -05:00
Larry Knox
d1f330fd61 Corrections and improvements to testh5dump.sh.in changes. 2019-10-09 09:36:26 -05:00
Larry Knox
21d69ca15f Fix errors in testh5dump.sh tests that grep for reference error messages. 2019-10-08 23:26:03 -05:00
Allen Byrne
d42203b1d4 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '4c558700ab33934e7358483c5d20fea4823baf9e':
  Update RELEASE.txt for reference changes
  Fix reference type comparison in h5dump
  Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim()
  Add new H5R API that abstracts object, region and attribute reference types
  Remove ability to loc by ref from H5VL layer
  Add support for retrieving object name by token
  Add H5VL_OBJECT_GET_TYPE to get object type
  Add H5VL_MAX_TOKEN_SIZE and H5VL_token_t
  Adapt Jerome's "file info" H5VL 'get' query to retrieve container token info.
  Fix H5VL_blob_get to return size of blob
  Add 'blob' callbacks to VOL, along with a native implementation to store them in the global heap, and changed the VL datatype conversion code to use blobs.
  Remove debugging logic from the new t_bigio test
  Expanded t_bigio.c to include Jordan's test from HDFFV-10539
  Another cleanup pass as suggested by the reviewers.
  Fix some typos and remove an unused prototype from H5Sprivate.h
  At the suggestion of the PR reviewers, moved the mpio_create_large_type to H5mpi.c and renamed the function appropriately.  Also moved some support functions to set and get the vvalue where we transistion to using derived datatypes.
  Made code review edit suggested by Jerome, plus various code updates to files that I touched to eliminate compile warnings (on my Linux box).
  No functional changes, just removed some tab characters
  Make the initial bug fixes to allow >2GB writes with Independent IO
2019-10-08 16:14:40 -05:00
Jerome Soumagne
c13078a0ed Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim() 2019-10-08 14:30:24 -05:00
Allen Byrne
403c0445fb Change reference test to grep for specific error 2019-10-07 14:00:54 -05:00
David Young
af1e100f49 For portability, use the POSIX sh(1) string-comparison operator =
instead of `==`.
2019-10-03 16:01:40 -05:00
Allen Byrne
bc61159318 HDFFV-10919 merge synching 2019-10-02 15:13:37 -05:00
Allen Byrne
643d298823 HDFFV-10918 add tests for h5repack ext storage 2019-10-01 16:38:48 -05:00
Allen Byrne
b2f52d0b07 Update versioning to next major version 2019-09-25 17:28:17 -05:00
Larry Knox
b04e1ad058 Update develop branch version to 1.13.0 after creation of hdf5_1_12
branch.
2019-09-25 16:21:23 -05:00
Jacob Smith
9a388325eb Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage 2019-09-24 16:40:02 -05:00
Jacob Smith
4ecc50bc13 Update to current external file population. 2019-09-24 15:29:56 -05:00
Jacob Smith
35a9e9c50f Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage 2019-09-23 17:23:02 -05:00
Jacob Smith
aa797af31b Refactor h5repackgentest to have more modular internals, for easier
addition of new tests.
Update manifest and test script for new hdf5 external-storage .h5 files.
2019-09-23 16:21:37 -05:00
Dana Robinson
93e8bbd9f4 Merge pull request #1936 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop
* commit 'a6930a2bcfd37ea3610baafb608faec883286315':
  Renamed get/set_time() calls in the tools library to avoid name clash when building static parallel HDF5 w/ static linking to OpenMPI.
2019-09-19 16:42:46 -05:00
Dana Robinson
a6930a2bcf Renamed get/set_time() calls in the tools library to avoid name
clash when building static parallel HDF5 w/ static linking to OpenMPI.
2019-09-19 13:50:49 -07:00
Allen Byrne
4775b6a3d9 Add missing HD prefix 2019-09-18 11:15:58 -05:00
Allen Byrne
3790ba38a1 HDFFV-10905 fix test scripts for no zlib 2019-09-17 14:38:26 -05:00
Allen Byrne
09d13b3c13 OESS-29 Fix HD prefix in perform and enable test compile 2019-08-27 16:49:10 -05:00
Allen Byrne
392340062b Add HD prefix 2019-08-27 09:21:08 -05:00
Allen Byrne
ba974c031d OESS-29 Update HD prefix mostly 2019-08-24 14:07:33 -05:00
Allen Byrne
64e6665b54 Add HD prefix to tests 2019-08-15 16:46:15 -05:00
Allen Byrne
f5a250e77c Whitespace cleanup 2019-08-15 09:03:03 -05:00
Allen Byrne
c60ceb8c08 Merge reconciliation and VFD test fixes 2019-08-04 15:19:51 -05:00
Allen Byrne
0147a6c713 Fix VFD tests and repack 2019-08-03 17:28:50 -05:00
Allen Byrne
517cadac26 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'f97e11e7635a0cd8728d4604ca5dceb3925ba44c':
  Update comment and check for strtoumax.
  Modify CMakeLists.txt file for renamed h5tools_test_utils files.
  Add HD to string functions. Switched strtoul to strtoumax in H5FDs3comms.c. Removed unused functions and variables in s3 and hdfs TestH5Pfapl*.java. Update Copyright headers.
  Squashed commit of the following:
2019-07-29 16:10:45 -05:00
Jacob Smith
7d3e170763 Refactoring. 2019-07-29 14:58:39 -05:00
Allen Byrne
da2ec6163d Update libvers usage 2019-07-28 14:41:52 -05:00
Allen Byrne
a7d74160d0 Correct generator and add HD prefix 2019-07-26 16:18:39 -05:00
Larry Knox
8008294578 Squashed commit of the following:
Merge changes from update_merged_S3_HDFS branch into develop.

commit d5034315aea88629929ac0c9c59ebfafd5f21a31
Merge: 9c48823 d3fdcd8
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Thu Jul 25 08:24:53 2019 -0500

    Merge branch 'develop' into update_merged_S3_HDFS
2019-07-25 11:47:12 -05:00
Allen Byrne
6a932198aa HDFFV-10529 Update CMake tests to use test fixtures 2019-07-23 16:24:56 -05:00
Jacob Smith
ded30348ae Add copyright/disclaimer to repack gentest.
Minor formatting tweaks.
2019-07-22 17:34:01 -05:00
Jacob Smith
c7f8cb011d Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage 2019-07-22 17:09:54 -05:00
Jacob Smith
7ff3a63d5f Minor formatting adjustments. 2019-07-22 16:55:37 -05:00
Allen Byrne
ac8a1f02ab Add missing target root path, check other export macro 2019-07-17 11:58:05 -05:00
Allen Byrne
741ef0aaef HDFFV-10845 skip test if CMake command doesn't support ignore EOL 2019-07-17 11:58:05 -05:00
Allen Byrne
3ea746014a HDFFV-10845 copy files with windows EOL 2019-07-17 11:58:05 -05:00
Allen Byrne
95d3b41af0 HDFFV-10845 separate test used by copy windows files 2019-07-17 11:58:04 -05:00
Allen Byrne
0eb050d481 HDFFV-10845 mingw needs special windows reference files 2019-07-17 11:58:04 -05:00
Allen Byrne
f724e86727 HDFFV-10845 use of TARGETFILE disables auto emulator 2019-07-17 11:58:04 -05:00
Allen Byrne
7ba562a820 HDFFV-10845 fix configure check and PATHs 2019-07-17 11:58:03 -05:00