Commit Graph

2471 Commits

Author SHA1 Message Date
Neil Fortner
79771d3fac [svn-r26346] Add more test cases, refactor test code to reduce code duplication. Minor
fixes in src.
Note make check still fails in h5ls test.

Tested: ummon
2015-03-03 12:32:22 -05:00
Neil Fortner
952d00e7f0 [svn-r26306] Merge r26296 through 26304 from trunk to vds branch.
It should no longer be necessary to use --enable-using-memchecker
make check fails due to an issue with h5ls apparently unrelated to the merge

Tested: ummon
2015-02-25 17:06:18 -05:00
Mohamad Chaarawi
c4044e0c85 [svn-r26303] remove files with .clog2 extension generated by MPE when doing make clean. 2015-02-25 13:48:31 -05:00
Quincey Koziol
0ce8fddc73 [svn-r26301] Description:
Bring Neil's fix for error in H5S_extent_copy() back to the trunk.

Tested on:
    Mac OSX/64 10.10.2 (amazon) w/serial
    (h5committest forthcoming)
2015-02-25 12:29:30 -05:00
Quincey Koziol
2dae075569 [svn-r26300] Description:
Add H5Sis_regular_hyperslab() and H5Sget_regular_hyperslab() API routines,
along with tests.

Tested on:
    Mac OSX/64 10.10.2 (amazon) w/serial
    (h5committest forthcoming)
2015-02-25 12:05:16 -05:00
Neil Fortner
2ca5b16a9f [svn-r26296] Merge r26050 through 26295 from trunk to vds branch.
Tested: ummon
2015-02-24 16:53:56 -05:00
Neil Fortner
2811133914 [svn-r26293] Implement patching of virtual dataspace extent in mapping dataspaces when
opening virtual dataset.  Add tests for this.

Tested: ummon
2015-02-24 14:54:48 -05:00
Allen Byrne
8e48921d90 [svn-r26283] Correct test folder handling (merge from trunk) 2015-02-23 11:54:39 -05:00
Allen Byrne
c5da9e3270 [svn-r26282] Update source file list and test list 2015-02-23 11:20:53 -05:00
Elena Pourmal
7881deb15e [svn-r26268] Added VDS example.
I ran bin/reconfigure on jam and it modified test/Makefile.in. May be Neil fixed Makefile.am,
but didn't run reconfigure?

Tested on jam.
2015-02-21 22:26:08 -05:00
Neil Fortner
88b7d8d34c [svn-r26261] Commit working but incomplete prototype. Does not perform I/O.
Tested: ummon
2015-02-20 16:53:35 -05:00
Dana Robinson
a7f70203b4 [svn-r26225] Removes broken open() call work-around that was specific to the now
unsupported Code Warrior compiler. Also removes the H5_NO_SHARED_WRITING
symbol from the pubconf file.

Fixes: HDFFV-9080

Tested on: jam only, after bin/reconfigure
           (all platforms should see no source changes)
2015-02-19 00:24:09 -05:00
Allen Byrne
73bb11dda3 [svn-r26208] Update cmake minimums 2015-02-18 11:56:22 -05:00
Neil Fortner
a5460b731d [svn-r26199] INCOMPLETE, UNWORKING CODE
Fix doubled vds.c
2015-02-17 16:12:58 -05:00
Neil Fortner
1199ab1f48 [svn-r26198] INCOMPLETE, UNWORKING CODE
Commit progress through 1610 CST 2/17/15
2015-02-17 16:11:22 -05:00
Scot Breitenfeld
b28b5fade9 [svn-r26188] Merged autotools fixes into the trunk:
HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
2015-02-16 12:17:49 -05:00
Mohamad Chaarawi
74fbb9e327 [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.

tested with h5committest.
2015-02-16 11:17:03 -05:00
Allen Byrne
fc93c6fe70 [svn-r26106] Disable flush1/flush2 test under debug VFD on Windows. 2015-02-02 12:01:15 -05:00
Allen Byrne
e05c75ea4e [svn-r26074] fix test destination 2015-01-29 12:58:27 -05:00
Allen Byrne
eb3900554e [svn-r26036] HDFFV-8736: Patch H5PL.c and test for cygwin plugin support.
Tested: local linux and cygwin
2015-01-26 13:03:18 -05:00
Mohamad Chaarawi
a24e3e5c86 [svn-r25994] revert adding the has_mpi_atomicity feature flag and use the has_mpi
flag instead.
2015-01-21 13:57:55 -05:00
Allen Byrne
21ef17f951 [svn-r25990] Add VFD flush2 depends on flush1 property to test 2015-01-21 09:31:46 -05:00
Allen Byrne
aafac8d770 [svn-r25986] HDFFV-9060: Changed test folder to use different test folders for VFDs and regular. Needed to set srcdir env var and specify working folder to the folders where all the reference files were copied.
Tested: local linux
2015-01-20 14:44:28 -05:00
Mohamad Chaarawi
aac2bb6182 [svn-r25984] change the message flag H5O_MSG_FLAG_FAIL_IF_UNKNOWN to
H5O_MSG_FLAG_FAIL_IF_UNKNOWN_AND_OPEN_FOR_WRITE. Will add a new
H5O_MSG_FLAG_FAIL_IF_UNKNOWN_ALWAYS with the new avoid_truncate patch
coming later.

tested h5committest
2015-01-20 12:17:05 -05:00
Allen Byrne
671006a10d [svn-r25953] Comment out printf statement as it caused system resource issues on Windows. Test now executes in 1/10 of time.
Tested: local linux and Windows
2015-01-05 16:32:43 -05:00
Quincey Koziol
89e2c8822d [svn-r25766] Description:
Revert r25273, 25283 & 25439 (the hyperslab improvement changes).  They
are buggy and it's taking me a long time to correct the problem.  I'll check
in a revised form of the changes when I've got them straightened out.

Tested on:
    Mac OSX 10.10.0 (amazon) w/gcc 4.9.x, C++, FORTRAN
    Linux 2.6.x (jam) w/parallel
2014-11-03 15:13:25 -05:00
Mohamad Chaarawi
6735f59f7d [svn-r25750] use MPI_File_get_size() instead of stat when retrieving the file size for the MPIO driver. 2014-10-28 11:59:36 -05:00
Mohamad Chaarawi
26400c392b [svn-r25659] fix filename generation with prefix for perf test.
tested h5commitest, jam & platypus parallel.
2014-10-02 10:56:09 -05:00
Allen Byrne
148097511c [svn-r25607] Add 10 sec timeout to VFD - flush2 tests instead of default 20 min. 2014-09-22 13:46:21 -05:00
Mohamad Chaarawi
88fb6b1374 [svn-r25531] remove use of C99 PRI that failed on windows in dtypes.c
fix bugs where hid_t were assumed to be 32 bit ints or herr_t.
2014-08-11 14:13:45 -05:00
Mohamad Chaarawi
2a5454616a [svn-r25527] fix printf format warnings in dtypes test. 2014-08-11 09:19:43 -05:00
Mohamad Chaarawi
beb6f83cfd [svn-r25500] fix HDFFV-8888 - H5Ldelete_by_idx fails on non-existent group name.
tested Jam. minor change.
2014-07-31 14:26:19 -05:00
Quincey Koziol
33ea1ada24 [svn-r25496] Description:
Merge 64-bit ID changes from branch to trunk.  (Plus a few minor cleanups
that aren't on the branch)

Tested on:
    Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN
    (h5committested on branch already for a week)
2014-07-30 15:55:14 -05:00
Mohamad Chaarawi
bd66cdd5d6 [svn-r25468] some code refactoring to align trunk with VOL branch.
tested with h5committest.
2014-07-22 14:54:51 -05:00
Albert Cheng
f1f7b15e50 [svn-r25465] BUg fix: HDFFV-8881
testfrome.c has incorrectly exit code (using -1). Fixed by replacing them
with C defined EXIT_FAILURE. Verified by temporary decreaing MAXNUMTESTS
to introduce failure in testhdf to see the changed code did work.
Also replaced all other correctly coded exit codes with the C defined
EXIT_SUCCESS and EXIT_FAILURE. This would help portability for non-Unix
systems.

Tested: h5committest.
2014-07-22 14:06:18 -05:00
Quincey Koziol
61a411b02f [svn-r25450] Description:
Initial tweaks to align with VOL branch.

Tested on:
    Mac OSX/64 10.9.3 (amazon) w/gcc 4.9
    (h5committest not required, too small)
2014-07-21 11:05:04 -05:00
Mohamad Chaarawi
92cc75bfae [svn-r25401] add serial and parallel regression tests for zero dset read/write bug. 2014-07-09 14:01:25 -05:00
Mohamad Chaarawi
06ef71a37f [svn-r25397] - remove configure checks for MPI_File_get_size and Big
MPI_File_set_size as they are supported by most MPI implementations.
- fix bug in t_mpi.c (HDFFV-8856)
2014-07-07 13:22:48 -05:00
Allen Byrne
28ec2d2693 [svn-r25357] Change default timeout to 1200 seconds or 20 mins
adjust up for certain tests.
2014-06-25 09:15:13 -05:00
Allen Byrne
e90941e86a [svn-r25343] Add more vfd tests to smaller timeout limits 2014-06-23 16:57:13 -05:00
Allen Byrne
9c4e646c1a [svn-r25310] Add max time for VFD objcopy test 2014-06-18 08:39:37 -05:00
Quincey Koziol
ec408ef083 [svn-r25283] Description:
Correct error in new hyperslab selection test to use the right # of
dimensions for start/stride/count/block arrays.  Also, switch H5Sselect_select
to H5Smodify_select.

Tested on:
    MacOSX/64 10.9.3 (amazon) w/gcc 4.9.1, OpenMPI, C++, FORTRAN & threadsafe
    (Too minor to require h5committest)
2014-06-13 22:23:54 -05:00
Quincey Koziol
4ccb865c70 [svn-r25273] Description:
Bring in Chao/Neil/my changes to optimize hyperslab selection operations
further, along with 3 new public API routines: H5Scombine_hyperslab(),
H5Sselect_select() and H5Scombine_select(), along with many minor cleanups to
the code and fixing a few compiler warnings.

Tested on:
    Mac OSX/64 10.9.3 w/gcc 4.9.x and parallel w/OpenMPI
    (h5commttest forthcoming)
2014-06-13 01:23:57 -05:00
Allen Byrne
d74b7fb7b8 [svn-r25261] limit vfd flush1 test time 2014-06-11 14:23:00 -05:00
Allen Byrne
21474f8eee [svn-r25188] Implement change to cmake_ext_mod config folder
Tested: local linux
2014-05-14 14:50:28 -05:00
Larry Knox
c6e3e68297 [svn-r25117] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll back fix for removing rpaths from l
ib files.  The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath co
nfigure option was invoked.
Added instead configure variable hardcode_into_lib=no.  This removes rpath from lib files on Linux
and solaris machines.

Tested with h5committest on jam, koala, ostrich and platypus (cmake), and with configure option --disable-sharedlib-rpath on emu, platypus and quail.
2014-04-25 16:59:53 -05:00
Dana Robinson
7309bb5ab8 [svn-r25113] Fixed Subversion EOL and executable attributes. No code changes. 2014-04-25 16:27:37 -05:00
Quincey Koziol
95e0006dc2 [svn-r25097] Description:
Make progress toward moving from DXPL IDs to property list structures
within the library.  Also move the signature location code from the H5F
package to the H5FD package, where it's a better fit.  Also, clean up some
more compiler warnings along the way.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & parallel
    (h5committest forthcoming)
2014-04-25 09:32:17 -05:00
Quincey Koziol
3bdb116942 [svn-r25092] Description:
More migration to using H5F_io_info_t pointers and away from using
property list IDs internally.  Also, clean up some compiler warnings in the
cache code.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & parallel
    (h5committest forthcoming)
2014-04-24 11:30:24 -05:00
Quincey Koziol
7b6eae2ddf [svn-r25084] Description:
Begin process of migrating from using property list IDs internally to the
library to using the internal generic property list data structure.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/C++, FORTRAN & parallel
    (h5committest forthcoming)
2014-04-23 11:30:25 -05:00