More tests
Description:
Added tests to make certain that failed dataset, group, named datatype and
attribute creations clean up the file space they allocated before failing.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Refactored code
Description:
Moved duplicated "get_file_size()" function from a couple of tests into a
central location.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Improved tests
Description:
Added test for dangling attributes.
Also added code to test with weak, semi & strong file close degrees for
all tests.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Bug fix.
Description:
When a duplicate object was attempted to be created, the library would
leak file memory and object references in the file, potentially causing an
infinite loop when shutting the library down.
Solution:
Clean up after ourselves... :-)
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Bug fix
Description:
When objects were left open in a file, the API shutdown code would end
up closing property lists "out from underneath" files that were left open
pending the objects in the being closed. This caused problems later when
file objects would try to access their property list and fail to close,
causing an infinite loop in the library shutdown.
Solution:
Create some dependencies in the order that APIs are shut down, trying to
close "higher" level APIs before closing "low" level APIs. This still isn't
precise, but it does work correctly now.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Purpose: Bug fix
Description: On Windows Fortran szip test failed in debug mode.
It turned out that C-stub for H5Pget_filter_by_id didn't
calculate the correct value of namelen parameter that is
passed to the H5Pget_filter_by_id function. As a result
fortran parameter that hold creation property id was overwritten
and h5fdcreate_f failed.
Solution: Fixed the value of namelen parameter to the H5Pget_filter_by_id
function.
Platforms tested: Windows 2000 with VF both debu and release modes,
sol, verbena.
Misc. update:
Improvement
Description:
If $CXX is not defined, configure will try a list of possible
C++ compiler name. That is not always desireable.
Solution:
Change configure to combine all powerpc-ibm-aix* to one version.
Add xlC as the default $CXX value.
Platforms tested:
Tested in Copper only since the change affect AIX machine only.
Misc. update:
bug fix
Description:
Parallel binary generated in copper could not run without first
setting LIBPATH to some values. This is because libtool putting
a very restrictive libray path into the generated library.
Solution:
There had been hack in before for the other IBM SP systems
identified by hostname. Add copper to the list.
Also, narrow down the hostname patter for Nersc Seaborg
machine a little bit.
Platforms tested:
Copper parallel only since that is the only place it failed.
Misc. update:
Purpose: Code cleanup
Description: For some unknown to myself reason I used COMMON in the
HDF5 module that has to be included in all Fortran
HDF5 application. This is redundant and may cause
problems for optimization. Also COMMON is an "OLD"
feature and shouldn't be used.
Solution: Removed COMMON statements.
Platforms tested: modi4 sequential and parallel, arabica, vebena,
Windows with Visual Fortran.
Misc. update:
Bug fix.
Description:
the MPI_Get_count test does not work correctly (the macro name
MPI_GET_COUNT_WORKS is not even used in source code.) For some
reason, this test sometimes hangs in AIX.
Solution:
Blocked out the test for now and removed the code later when
things are verified to be correct.
Platforms tested:
h5committested.
ALso tested in Copper (32/64bit parallel, 32 bit serial).
Misc. update:
Windows portability fix
Description:
Change "long long"s in code to "long_long"s, which is the portable version
of this type.
Platforms tested:
FreeBSD 4.8 (sleipnir)
to small for h5committest
Description: H5Tget_native_type fails on Cray for compound datatype.
Solution: there's size comfusion in the library on H5T_get_native_int function
Platforms tested: Cray, h5committest
Misc. update:
Improvement
Description:
RUNPARALLEL is setup with default value when --enable-parallel but only if
CC is not set.
Solution:
set RUNPARALLEL to default value of using poe when --enable-parallel
or when an MPI compiler (e.g. mpcc_r) is used.
Platforms tested:
Copper for both 32 and 64 bit, serial and parallel.
(32bit parallel had a hang problem in configure which is a different but
known problem.)
Note that one still need to setenv AR "ar -X64" for 64bit configure.
Misc. update:
Purpose:
Bug Fix
Description:
There was another GNU-make-ism in the C++ examples Makefile.in
that I didn't clean up.
Solution:
Changed the "$<" to the name of the file to compile.
Platforms tested:
Copper (Small fix...problem was on Copper).
Misc. update:
Test bug fix
Description:
The fill time in a dataset with no fill value information created with an
older version of the library was getting set to H5D_FILL_TIME_ALLOC instead of
the new default H5D_FILL_TIME_IFSET and was causing H5Dcreate() calls with that
dataset creation property list to fail now.
Solution:
Set the new default in the fill time initialization for missing fill value
information.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Bug fix
Description:
The fill time in a dataset with no fill value information created with an
older version of the library was getting set to H5D_FILL_TIME_ALLOC instead of
the new default H5D_FILL_TIME_IFSET and was causing H5Dcreate() calls with that
dataset creation property list to fail now.
Solution:
Set the new default in the fill time initialization for missing fill value
information.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Driver error
Description:
The tmtimeo.h5 file was supposed to have been generated from gen_old_mtime.c
which was compiled with a pre-1.5.x version of the library, however it appears
to have been created with a newer version of the library and did not contain
the older form of the mtime object header information that was being tested for.
Solution:
Run a version of gen_old_mtime that was compiled & linked against an older
version of the library to generate the tmtimeo.h5 file.
Had to update the modification time used for testing in the mtime.c file
also.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Purpose: Maintenance for 1.6 release
Description: hdf5 project file did not have new H5Ptest.c and H5Stest.c functions
included.
Solution: Added new files to the project and included new project to the all_withf90.zip
file
Platforms tested: This is a pure Windows change; Windows 2000
Misc. update:
minor improvment
Description:
corrected an omission in the usage help output.
Added more parameters checks.
Solution:
Platforms tested:
Only in modi4.
Misc. update:
Purpose: Maintenance
Description: H5Stest.c and H5Ptest.c were missing from the hdf5 and hdf5dll
projects. That caused compilation to fail on Windows.
Solution: Added missing files to the projects.
Platforms tested: it is windows change only, so Windows 2002
Misc. update:
Purpose: Small bug fix
Description: Variable flag was declared twice. That caused compilation to fail
on True64 system.
Solution: Deleted one of the declarations.
Platforms tested: True64 at PSC and arabica. Change is trivial, so h5commitest
is not necessary.
Misc. update:
New feature/Bug fix
Description:
Add new fill time value - H5D_FILL_TIME_IFSET which writes the fill value
to a dataset if the user has defined one, otherwise not writing the fill value
to the dataset.
Platforms tested:
FreeBSD 4.8 (sleipnir) serial & parallel
h5committest
Bug fix
Description:
MPE instrumentation was out of date and wasn't reporting the correct name
of the API functions in the library.
Platforms tested:
IBM p690 (copper)
h5committest not performed because it doesn't test MPE.
Bug Fix
Description:
On HP-UX platforms, the "open()" function needs to specify that the
file being created has permissions S_IRWXU, which means that it gives
read/write/execute permissions to the user who created the file (how
nice of it!).
Solution:
Added the S_IRWXU flag to the open() function call.
Platforms tested:
HP-UX 11
Arabica,
Modi4,
Verbena
Misc. update:
Bug Fix
Description:
On Kelgia, the h5c++ script file needs to be explicitly chmod'ed to
executable.
Solution:
Placed this at the end of the configure script (just like in the
other configure scripts).
Platforms tested:
Kelgia (Very small fix...only needed to test it on one platform).
Misc. update:
Updating zip file for windows
Description:
Kent made two libraries libtest and libtestD for code in
hdf5/test/h5test.c. Some of the C++ tests are using h5test.c,
so I changed them to use the new libraries instead.
Solution:
Added libtest to project dsets_cpp and libtestD to project
dsets_cppdll.cpp and removed h5test.c from them.
Platforms tested:
Windows 2000 - should not effect non-windows platforms
Purpose: Maintenance for the third round of testing
Description: Increased the version number to 1.5.59 after creating
a tar ball for testing.
Solution:
Platforms tested:
Misc. update:
Updating zip file for windows
Description:
Added h5cpputil.h and h5cpputil.cpp to these projects:
dsets_cpp
dsets_cppdll
testhdf5_cpp
testhdf5_cppdll
Platforms:
Windows 2000 - should only effect this platform
Description: H5Tget_native_type fails for multiple kinds of datatype on Cray; it fails
fix-length string type, too.
Platforms tested: Cray, h5committest
Compatibility fix
Description:
The H5P[set|get]_fapl_mpiposix calls changed between v1.4.x and v1.5.x.
Solution:
Wrap them in the v1.4 backward compatibility #ifdefs and update tests, etc.
Platforms tested:
FreeBSD 4.8 (sleipnir) w/paralle & v1.4 compatibility
h5committest pointless
Bug fix
Description:
The dataset's modification time was getting set whenever raw data was
written with H5Dwrite. Unfortunately, this is a metadata change (which are
required to be performed collectively) and H5Dwrite may be called independently
from a parallel program, resulting in metadata cache corruption and/or program
hangs.
Solution:
Don't update the modification time when raw data it written. :-(
Platforms tested:
FreeBSD 4.8 (sleipnir) w/parallel
h5committest
Misc. update:
Noted in release notes and also sent to Frank for updating the docs.
Test bug fix
Description:
Chunked datasets with early space allocation and unlimited dimensions were
running into problems where the dataset's "layout" message was marked as
constant too early, preventing the dataset's dimensions from being extended.
Solution:
Change logic for marking the layout message constant to wait a bit longer.
Platforms tested:
FreeBSD 4.8 (sleipnir) w/parallel
h5committest
Bug fix
Description:
Chunked datasets with early space allocation and unlimited dimensions were
running into problems where the dataset's "layout" message was marked as
constant too early, preventing the dataset's dimensions from being extended.
Solution:
Change logic for marking the layout message constant to wait a bit longer.
Platforms tested:
FreeBSD 4.8 (sleipnir) w/parallel
h5committest
Purpose:
To facilitate finding functions, particularly in long Reference Manual
sections.
Solution:
Added alphabetized function listings. (NOTE: Aside from the H5I and H5Z
sections, this is not necessarily the final implementation; there will
likely be another revision in the presentation of this listing before it
is released.)
Platforms tested:
Safari, IE 5
Bug fix
Description:
Corrected an omission of a module needed by the testhdf5 program.
Platforms tested:
Only in modi4 as the change is small.
Misc. update:
Text cleanup
Description:
Re-worded some informative and error messages.
Remove/Updated outdated comments.
Platforms:
Linux 2.4 (eirene)
IRIX 6.5.11 (modi4)
Bug fix
Description:
h5cc was removed prematurely in "make clean". Moved it to be
removed in "make distclean" only.
Solution:
Platforms tested:
COpper.
Misc. update:
Bug fix.
Description:
Changed "x=(x++)%y" to "x=(x+1)%y", since the former was not guaranteed to
compile to the latter.
Platforms tested:
Eyeballed.
Misc. update:
Pointed out by: Forsythe, Christi <caforsy@sandia.gov>
Bug fix/new feature
Description:
Teach h5dump/h5ls to display variable-length datatypes correctly.
Change "raw byte" output of array elements from "0xde8141b1a818" to
"de:81:41:b1:a8:18" so that it's easier for users to read.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Misc. update:
Patch provided by Robb Matzke (matzke@llnl.gov)
Bug fix
Description:
The output from the modification time is highly system dependent, so
remove it from the h5ls output before comparing file with diff.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Bug fix
Description:
The output from the modification time is highly system dependent, so
remove it from the h5ls output before comparing file with diff.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Code cleanup/new features.
Description:
Clean up whitespace & formatting.
Make the -S (simple) output display a dataset's modification time in UTC
rather than local timezone.
Display variable-length datatype information.
Simplified & enhanced bitfield datatype information displayed.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
