Bug fix
Description:
Fix h5tools routines to not try to call MPI_Init() unless an MPI-based
VFD is actually used.
Platforms tested:
FreeBSD 4.9 (sleipnir) w/parallel
Linux 2.4 (verbena) w/parallel
New Feature. (Contributed by Robb)
Description:
Allow h5ls to specify a VFL with the '--vfl=' command line flag.
Add MPI-I/O & MPI-POSIX VFL drivers to list of drivers available for
h5ls and h5dump.
Platforms tested:
FreeBSD 4.9 (sleipnir) w/parallel
h5committested
new library function H5Pdelete_filter
deletes one or all filters from a dataset creation property list
this was done for the NONE option of h5repack, added tests for this feature
added a test for the new function in /test/dsets.c
Description:
Solution:
Platforms tested:
linux
solaris
AIX
Misc. update:
added h5repack and h5diff support for copying and differences of references to dataset regions
modified the behaviour in the diff of attributes, when a difference in name is detected
in the attribute cycle (number of attributes of object), instead of exiting the
cycle, rather continue
Description:
Solution:
Platforms tested:
linux
solaris
AIX
Misc. update:
h5repack new features
Description:
addded the copy routines for hard links
changed the traversal structure to store information about the hard links
added tests
Solution:
Platforms tested:
linux
solaris
IRIX
Misc. update:
h5repack new features
Description:
added debugging functions and a hard link generated dataset for the test suite
Solution:
Platforms tested:
linux
solaris 2.7
IRIX
Misc. update:
code clean, bug fix
Description:
the attributes of the root group were not being compared
removed compiler warnings on IRIX and solaris
Solution:
added a special function to compare the attributes of the root group
Platforms tested:
linux
IRIX 6.5
solaris 2.7
Misc. update:
bug fix
Description:
sleipnir was complaining about a missing header declaration
Solution:
added the include
Platforms tested:
linux (small)
Misc. update:
h5diff new features
Description:
added comparison for attributes
adeded comparison for all dataset datatypes
added tests for the new features
changed the output format
Solution:
Platforms tested:
linux
solaris 5.7
IRIX 6.5 (64)
Misc. update:
Bug fix
Description:
Variable length strings and sequences with NULL pointers were not handled
by library, causing problems access the data. This also affected fill values
for variable-length datatypes.
Solution:
Address the issues in the library by detecting NULL sequences/strings
and avoid trying to convert them.
Patched up dumper to display NULL sequences/strings.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
h5diff new feature
Description:
added compare for attributes
a new options flag (-a) was added to the options structure. it is 0 by default (no compare )
the output of the compare is the same that for datasets, and all the other flags also apply for attributes
(the memory compare is done in the same function diff_array)
all the other requirements for compare of datasets (type, space) are identical too
Platforms tested:
linux
solaris 2.7
IRIX
Misc. update:
h5diff improvment
Description:
changed a call to exit(1) for return -1 for user friendiness in the h5diff function
in the case that H5Fopen fails
Solution:
Platforms tested:
linux (small change )
Misc. update:
h5diff new features
Description:
added the diff for variable lenght, opaque, enum, and bitfield datasets
Solution:
Platforms tested:
linux
solaris 2.7
IRIX
Misc. update:
h5diff new features
bug fix
Description:
implemented the diff for STRING and ARRAY types
fixed a bug. when the datasets are empty, do not try to compare them .
the check empty is made with H5Dgetstorage_size
Solution:
Platforms tested:
linux
solaris 5.7
IRIX
Misc. update:
h5diff new features
Description:
implemented diff for compound types. so far it only compares the integer and float classes
of these compound types. this is done with a new recursive function
that compares datum by datum
Platforms tested:
linux
solaris 2.7
IRIX
Misc. update:
h5repack new features
Description:
added a copy routine for all types
added a copy routine for attributes
commnented some debug messages in h5trav
added the verbose option to some h5diff messages
Platforms tested:
linux
solaris 2.5
IRIX
Misc. update:
Code cleanup
Description:
Change field member count and indices for compound and enumerated types from
'int' to 'unsigned' to better reflect actual use.
Cleaned up a few other minor compiler warnings, etc.
Platforms tested:
FreeBSD 4.9 (sleipnir)
Linux 2.4 (verbena)
too minor to require h5committest
Bug fixes and code cleanup
Description:
Corrected output of array separator when vlen separator was needed.
datatypes.
Parts of formatting cleanup to greatly reduce the amount of trailing
whitespace emitted in output.
Platforms tested:
FreeBSD 4.9 (sleipnir)
h5committest
Code cleanup
Description:
Remove various "fixtype" routines which duplicate (and actually pre-date)
the functionality in H5Tget_native_type in favor of having the tools call
H5Tget_native_type(). This provides the same functionality (actually better
functionality, since the old "fixtype" routines didn't handle alignment of
compound fields correctly) and reduces the amount of code to maintain.
Add additional tests to dump out a "complex" compound datatype which
exercises more code in the library for aligning compound fields correctly.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Updated the copyright notice--mostly by rearranging
some text to make them consistent.
Solution:
Platforms tested:
"h5committested"--sol is down, so, no SUn test.
Misc. update:
Bug Fix
Description:
The SUBDIRS macro is now defined as "" in the config/commence.in
file. We shouldn't have definitions of this macro before the
inclusion of config/commence.in.
Solution:
Placed all definitions of SUBDIRS after config/commence.in inclusion.
Platforms tested:
Modi4 (Small fix yet again).
Misc. update:
Bug fix/new feature
Description:
Teach h5dump/h5ls to display variable-length datatypes correctly.
Change "raw byte" output of array elements from "0xde8141b1a818" to
"de:81:41:b1:a8:18" so that it's easier for users to read.
Platforms tested:
FreeBSD 4.8 (sleipnir)
h5committest
Misc. update:
Patch provided by Robb Matzke (matzke@llnl.gov)
Bug Fix (Bug #806)
Description:
When compiling/installing with the command "make install" (without
performing a "make" beforehand) the tools weren't being made. This
was because the `install' command in the Makefiles only relied upon
public libraries, not private ones (which the one in the tools
directory is).
Solution:
Had the `install' command be dependent upon an "AUX_LIB" macro which
includes libraries which are needed but aren't distributed (that is,
they're staticly compiled).
Platforms tested:
Linux
Migrate from configure macros of XYZ_ABC to H5_XYZ_ABC
Description:
configure generates many macros definitions on the fly and
were stored in src/H5config.h which is included by H5public.h.
But other software that uses hdf5 may also run their own configure.
There can be a clash in macro name space. We decided awhile ago
to prepend all generated macros with "H5_" to avoid conflicts.
The process has started and this commit completes it (at least attempt
to).
Solution:
Many macros symbols (e.g. SIZEOF_xxx and HAVE_xxx were changed to
H5_SIZEOF_xxx and H5_HAVE_xxx). Then H5private.h no longer includes
H5config.h. This cuts H5config.h away from HDF5 source code.
Pending issues:
The module of fortran and pablo are to be resolved in a different
commit.
Platforms tested:
eirene (parallel), arabica (solaris 7 --enable-fortran, --enable-cxx)
