Commit Graph

15478 Commits

Author SHA1 Message Date
Allen Byrne
740d4a3b6f [svn-r29888] Correct spelling of testfile name 2016-05-04 13:13:54 -05:00
Allen Byrne
5497968dfe [svn-r29887] Add missing testfiles for h5repack 2016-05-04 12:53:49 -05:00
Allen Byrne
3764d69e9e [svn-r29885] Fix memory leak when one dataset is vlen. 2016-05-04 11:39:28 -05:00
Allen Byrne
2f1b517021 [svn-r29884] VDS correction for get_space_status, with test change.
Add new files for repack tests.
Add repack tests for VDS files.
2016-05-04 11:38:08 -05:00
Allen Byrne
f962c3d963 [svn-r29883] Convert import test script to standard used by other test scripts. 2016-05-04 11:35:59 -05:00
Allen Byrne
ca8465513d [svn-r29882] Convert cache source files to library compatible by CMake and Windows 2016-05-04 11:29:52 -05:00
Allen Byrne
5e94747c52 [svn-r29881] Add include guards.
Remove unnecessary includes.
2016-05-04 11:18:11 -05:00
Allen Byrne
1bd3635781 [svn-r29880] Add HD to sleep function calls 2016-05-04 11:16:45 -05:00
Allen Byrne
0c0d6bd4df [svn-r29878] Add LD tests to CMake.
Add include guards and Windows guards to dectris_hl_perf.c file.
2016-05-04 11:14:45 -05:00
Allen Byrne
2d36359035 [svn-r29874] Move hl/tools/gif2h5 CMake code to subfolder. 2016-05-04 10:54:31 -05:00
Allen Byrne
f1633a5fe2 [svn-r29873] Java add missing APIs.
Adjust whitespace in H5.java for exception indentation.
Adjust whitespace in JNI for function signature formatting.
2016-05-04 10:52:40 -05:00
Allen Byrne
54316ab542 [svn-r29871] HDFFV-9743: Fix java examples Debug build commands.
rename examples clear-objects test names.
2016-05-04 10:38:52 -05:00
Allen Byrne
792f902854 [svn-r29868] Add/convert most tools to use new HDF5_TOOLS_DIR instead of HDF5_TOOLS_SRC_DIR CMake VAR. 2016-05-04 10:30:30 -05:00
Allen Byrne
8bd70914fc [svn-r29867] CMake whitespace cleanup 2016-05-04 10:29:16 -05:00
Allen Byrne
7b291f3531 [svn-r29866] Add files to clear test generated files tests. 2016-05-04 10:24:16 -05:00
Allen Byrne
949853b047 [svn-r29864] Add ignore test names for Valgrind process.
Add files to clear test generated files tests.
2016-05-04 10:19:34 -05:00
Allen Byrne
74f3326a67 [svn-r29862] Convert source list names from *_SRCS to *_SOURCES.
Add/convert most tools to use new HDF5_TOOLS_DIR instead of HDF5_TOOLS_SRC_DIR CMake VAR.
2016-05-04 10:06:05 -05:00
Quincey Koziol
2e3e3f9cd3 [svn-r29857] Description:
Bring H5LD* routines from revise_chunks branch to trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-05-03 01:27:55 -05:00
Quincey Koziol
a6ce3d4e45 [svn-r29850] Description:
Bring H5DOappend(), H5P[s|g]et_object_flush_cb, and H5P[s|g]et_append_flush
from revise_chunks branch to trunk.  Brings along updated metadata cache
entry tagging, and the internal object flush routine.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-05-01 05:24:56 -05:00
Quincey Koziol
ac72823bc2 [svn-r29844] Description:
Minor rearrangements, to align with revise_chunks branch

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-04-30 22:18:00 -05:00
Quincey Koziol
bd33a9d6da [svn-r29842] Description:
Bring [appropriate portions of] r29811, 29813, 29826, 29830, 29831 from
revise_chunks branch to the trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-04-30 01:10:38 -05:00
Quincey Koziol
f63b2c50ac [svn-r29815] Description:
Change 'value' pointer to H5Pset() from 'void *' to 'const void *'.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial
    (h5committest forthcoming)
2016-04-26 14:33:45 -05:00
Binh-Minh Ribler
75b926c96a [svn-r29803] Purpose: Code improvement
Description:
    The constructor FL_PacketTable added in 1.10.0 did not have good
    prototype; it didn't allow the property list to be default.  Marked
    it deprecated and added this one:

        FL_PacketTable(hid_t fileID, const char* name, hid_t dtypeID,
                       hsize_t chunkSize = 0, hid_t plistID = H5P_DEFAULT)
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-25 23:15:52 -05:00
Binh-Minh Ribler
cedc64c695 [svn-r29800] Purpose: Fix memory leak - HDFFV-9700
Description:
    Applied user's patch to fix memory leak.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-25 16:05:37 -05:00
Binh-Minh Ribler
853b4f417b [svn-r29796] Purpose: Fix warnings HDFFV-8615
Description:
    The "warning: deprecated conversion from string constant to âchar*â
    [-Wwrite-strings]" was already removed by adding const to char*
    parameter in the FL_PacketTable.  This change is to remove the use
    of literal strings in code for maintainability.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-25 14:14:51 -05:00
Dana Robinson
f50629ed52 [svn-r29793] Removed -Waggregate-return from gnu C++ flags.
This flag generates a large number of warnings and is considered obsolete
since its primary purpose seems to have been to support ancient compilers
that could not return an aggregate.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           Autotools serial w/ C++
2016-04-25 11:35:40 -05:00
Binh-Minh Ribler
0d5910683d [svn-r29786] Purpose: Add new wrapper
Description:
    Added wrapper for H5Tset_nbit: void DSetCreatPropList::setNbit() const.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-25 01:09:46 -05:00
Binh-Minh Ribler
32bdd82cc8 [svn-r29782] Purpose: Code improvement
Description:
    - Removed ArrayType::rank and ArrayType::dimensions and modified the methods
      ArrayType::getArrayNDims and ArrayType::getArrayDims to always call the
      C functions to get the rank and dimensions.
    - Overloaded ArrayType::getArrayNDims and ArrayType::getArrayDims to provide
      const version and marked the non-const version deprecated.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-24 10:52:09 -05:00
Quincey Koziol
4f831405cb [svn-r29779] Description:
Bring over some of the tool testing for the new chunk indices.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-04-24 03:21:09 -05:00
Quincey Koziol
b0980a5f54 [svn-r29776] Description:
Bring "file pointer patching" code & test from revise_chunks to trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-04-24 00:50:00 -05:00
Quincey Koziol
3ac0a74bf3 [svn-r29775] Description:
Another change for 'none' file pointers.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-04-24 00:37:18 -05:00
Quincey Koziol
b2d6d68d5d [svn-r29770] Description:
Bring 'none' chunk index from revise_chunks branch to trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (w/check-vfd)
    (h5committest forthcoming)
2016-04-23 00:03:00 -05:00
Binh-Minh Ribler
997392079b [svn-r29766] Description:
- Changed object in catch statements to reference (left over from previous)

Platforms tested:
    Linux/32 2.6 (jam) (very minor)
2016-04-22 15:32:18 -05:00
Binh-Minh Ribler
c37607eb58 [svn-r29759] Purpose: Code improvements
Description:
    - Changed object in catch statements to reference
    - Replaced old-style casts or reinterpret_cast with static_cast
    - Removed unused name H5Library::need_cleanup
    - Removed Exception::printError from documentation
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-22 06:22:34 -05:00
Larry Knox
c63f96d6e7 [svn-r29755] test/ohdr.c apply fix for HDFFV-9713 to not open test file in source with write permission.
config/linux-gnulibc1   reapply filx for HDFFV-9439 which was partially removed, probably by merge from revise_chunks branch.

Tested with h5committest.new on kituo, ostrich, osx1010dev and platypus.
2016-04-20 15:53:47 -05:00
Scot Breitenfeld
988c33527f [svn-r29745] HDFFV-9767
h5perf output; should be MB not MBs

FIX: changed output text from MBs to MB and KBs to KB
2016-04-19 10:00:53 -05:00
Quincey Koziol
5108468482 [svn-r29743] Description:
Close another FAPL in the test_missing_chunk() routine.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (w/check-vfd)
    (h5committest forthcoming)
2016-04-19 09:25:49 -05:00
Quincey Koziol
c02c88f874 [svn-r29742] Description:
Add missing source file for single chunk index.

Tested on:
    Windows (via daily testing
2016-04-19 09:18:30 -05:00
Quincey Koziol
f7aff7d5cf [svn-r29738] Description:
Bring "single" chunk index from revise_chunks branch to trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (w/check-vfd)
    (h5committest forthcoming)
2016-04-18 23:21:12 -05:00
Quincey Koziol
6ce67650fb [svn-r29736] Description:
Close FAPL that was leaked in zero_dims test.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production, including check-vfd
    (h5committest forthcoming)
2016-04-18 21:42:30 -05:00
Quincey Koziol
062055fe60 [svn-r29730] Description:
Add missing pre-generated files to list of test files to copy.

Tested on:
    Windows (Reported by Allen)
2016-04-18 09:56:48 -05:00
Quincey Koziol
36062736a5 [svn-r29722] Description:
Bring over more dataset tests from the revise_chunks branch.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-04-17 02:26:51 -05:00
Quincey Koziol
ce8905cc90 [svn-r29718] Description:
Bring changes from revise_chunks branch to trunk

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel, and production
    (h5committest forthcoming)
2016-04-16 03:50:45 -05:00
Quincey Koziol
81ef260f6b [svn-r29717] Description:
Correct chunk index computation for earrays and farrays, particularly when
copying datasets with H5Ocopy() and other operations (like H5Dget_storage_size)
that require iterating over all chunks.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-04-16 03:42:48 -05:00
Quincey Koziol
a916ea97b8 [svn-r29716] Description:
Add missing testfiles from dsets.c to the 'clean' target.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-04-16 03:40:06 -05:00
Quincey Koziol
d3574d0570 [svn-r29715] Description:
Clean up coding to increment/decrement underlying FAPL for multi/split
VFDs, to avoid copying property lists as much.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-04-16 03:39:01 -05:00
Quincey Koziol
be24e91aec [svn-r29714] Description:
Switch to use internal DXPL ID, to align with recent changes within the
library.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial & parallel
    (Too minor to require h5committest)
2016-04-16 03:36:47 -05:00
Quincey Koziol
ccdf15d88a [svn-r29712] Description:
Minor code cleanups to address typos & warnings.

Tested on:
    MaOSX/64 10.11.4 (amazon) w/serial & parallel
    (Too minor to require h5committest)
2016-04-16 03:34:27 -05:00
Binh-Minh Ribler
bd4d0d62bd [svn-r29710] Purpose: Code improvements
Description:
    - Replaced "goto out" and "out:" with "goto error" and "error:" to indicate
      the failure situations.
    - Replaced old-style casts with static_cast to remove warnings.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-15 14:08:28 -05:00
Dana Robinson
57b7130acf [svn-r29698] Switched true and false to TRUE and FALSE in a function in
test/external.c.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial (external test only)
2016-04-14 16:26:41 -05:00