Commit Graph

157 Commits

Author SHA1 Message Date
lrknox
726d7d3af5 Add "-rpath /nowhere" to *_la_LDFLAGS for plugin test libraries. This
allows them to be successfully linked but not installed.  The change was
added for the HDF5 1.8.20 release, but is also needed for all other HDF5
branches.
2017-10-09 15:33:09 -05:00
Vailin Choi
b07eb6efd0 Fix for HDFFV-10216 segfault in H5G_node_cmp3 with corrupt h5 file
Fix H5HL_offset_into() to return error when offset exceeds heap data block size.
Also fix other places that call this routine to detect error return.
2017-08-22 01:36:20 -05:00
Vailin Choi
804a88fafd Fix for HDFFV-10160
Modifications to fix the assertion/abort failure when the application does not close the file.
2017-06-29 01:11:44 -05:00
lrknox
be49a94226 Comment out install-exec-hooks to remove libdynlib* files. Allen did
the same for hdf5_1_10 and hdf5_1_10_1 because the hooks don't reliably
work.  In the develop branch they are causing make install failures
because the autotools' install commands sometimes attempt to chmod these
files when they no longer exist.
2017-04-28 16:37:22 -05:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
lrknox
7bd516f2ea Our best effort to build dynamic plugin tests and not install them with
"make install".  It seems the install-exec-hook doesn't remove the last
to be installed.
2017-04-21 14:32:45 -05:00
lrknox
6ef69b7b17 Add targets for plugin test libraries to avoid linking to external libs. 2017-04-20 16:51:21 -05:00
Allen Byrne
0b226bd28b HDFFV-10170 undo patch 2017-04-18 11:04:22 -05:00
Allen Byrne
9b234d74bb Add plugin options for libs 2017-04-18 10:38:14 -05:00
Allen Byrne
e718e2ab31 HDFFV-10170 fix command syntax 2017-04-17 13:51:45 -05:00
Allen Byrne
9363223fb6 HDFFV-10170 chnage test libs to noinst type 2017-04-13 13:37:56 -05:00
Quincey Koziol
0313cbb91d Final merge of page buffering branch to develop 2017-03-13 21:30:37 -07:00
Quincey Koziol
a9808853d5 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into develop_merge_cache_image_06 2017-01-28 23:27:08 -08:00
Quincey Koziol
1949d5756d Cache image feature and testing 2017-01-28 23:19:37 -08:00
Dana Robinson
2cac1c0637 Moved remaining SWMR-related test files to develop. 2017-01-26 14:34:12 -05:00
lrknox
8452976de5 tools/test/h5diff/testh5diff.sh.in:
Add code to delete copies of test .h5 files copied from
         tools/testfiles/vds to tools/test/h5diff/testfiles when running
         "make check" for an in-source build.

    tools/test/misc/testh5repart.sh.in:
         Change the name of the temporary test directory from "testfiles"
         which is also used for 2 h5mkgrp test files under source control to
         "testrepart" to avoid deleting source controlled files when running
         "make check" in the source directory.

    Fix test scripts that remove source-controlled files during "make check" when run in-source.
    Fix test scripts that don't remove test files because they add files to test directories but don't remove them if the build directories are the same as the source directory.

    Fix any test source file or Makefile.am files for tests that leave data files are removed by neither "make check" nor "make distclean".
2017-01-12 22:20:11 -06:00
Dana Robinson
e41a15b7f0 Added a missing test file needed for the flushrefresh script. 2016-12-30 10:06:07 -05:00
Quincey Koziol
eefddf2813 Bring new/updated tests from revise+chunks branch: flush1/flush2 update and
flushrefresh test.  (Also refactor of message send / wait code)
2016-12-19 20:44:54 -08:00
Quincey Koziol
f8cfbee05e Merge SWMR-related testing to existing tests. 2016-12-18 02:19:26 -08:00
Quincey Koziol
b772be716d Merge SWMR-oriented accumulator tests from revise_chunks to develop. 2016-12-18 00:41:13 -08:00
Quincey Koziol
64a339183f Bring SWMR support in to the main development branch. (Finally!) More tests
and the tool and API wrappers will be coming in over the weekend.
2016-12-02 08:07:04 -08:00
Quincey Koziol
0d12ce44b2 Add cache logging test. 2016-11-03 23:27:10 -07:00
Dana Robinson
7f817fea7c Merge branch 'develop' into evict_on_close 2016-09-14 17:02:43 -04:00
Allen Byrne
0e99aa203a [svn-r30240] JAVA-1920: Create a filter plugin test that has a filter which calls a HDF5 function. 2016-08-01 13:17:36 -05:00
Dana Robinson
75aa26981b [svn-r30084] First pass at the evict-on-close feature.
The features is controlled via H5Pset/get_evict_on_close()
and is currently enabled by default (it will be disabled
by default in the final implementation).

There is a bug in the code where the eviction of tagged
metadata fails due to some of the metadata being dirty,
resulting in error return values and test failures.
2016-06-15 13:55:59 -05:00
Quincey Koziol
7a9e13afdb [svn-r30068] Description:
Bring metadata cache corking to trunk.

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-06-13 12:49:39 -05:00
Quincey Koziol
ac72823bc2 [svn-r29844] Description:
Minor rearrangements, to align with revise_chunks branch

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-04-30 22:18:00 -05:00
Quincey Koziol
f7aff7d5cf [svn-r29738] Description:
Bring "single" chunk index from revise_chunks branch to trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production (w/check-vfd)
    (h5committest forthcoming)
2016-04-18 23:21:12 -05:00
Quincey Koziol
36062736a5 [svn-r29722] Description:
Bring over more dataset tests from the revise_chunks branch.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-04-17 02:26:51 -05:00
Quincey Koziol
a916ea97b8 [svn-r29716] Description:
Add missing testfiles from dsets.c to the 'clean' target.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-04-16 03:40:06 -05:00
Dana Robinson
0dd0ffd5c1 [svn-r29421] Fix for HDFFV-9516.
Corrects a problem where H5Dget_access_plist() returns a dapl that
does not contain all dapl fields.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
2016-03-15 12:43:34 -05:00
Dana Robinson
19a8216bd5 [svn-r29182] Re-commit of HDFFV-8740 fix, which adds the ability to configure
external dataset storage path behavior.

This check-in fixes a bug in the original check-in where the
external path stored in the file struct was not copied on reopen
causing subsequent dataset operations to fail.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ fortran and C++
           autotools parallel (MPICH 3.1.4) w/ fortran
2016-02-22 16:40:03 -05:00
Dana Robinson
5655e5a91a [svn-r29084] Revert of:
r29069 and 72 (gheap cleanup)

r29041 and 43 (HDFFV-8740 external storage)

These cause problems in the daily tests. They will be
re-introduced when their respective problems have been
addressed.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial (check-vfd) w/ Fortran and C++
           autotools parallel w/ Fortran
           CMake serial
2016-02-10 23:40:10 -05:00
Dana Robinson
be36958b77 [svn-r29072] test/gheap stack size cleanup.
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial autotools (also w/ Valgrind)
2016-02-08 23:18:53 -05:00
Dana Robinson
c746447b0d [svn-r29041] Patch from Steffen Kiess that allows a relative path to be specified
for external dataset files set via H5Pset_external().

Resolves HDFFV-8740

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial
2016-02-04 10:35:17 -05:00
Quincey Koziol
9ceca0f89a [svn-r28710] Description:
Bring r28708 from revise_chunks branch:

    Fix earray, farray and btree2 use of incorrect file pointer when two files
are opened and used to access the data structure.  Misc. minor code cleanups
as well.

Tested on:
    MacOSX/64 10.11.2 (amazon) w/serial & parallel
    h5committest forthcoming
2015-12-19 09:42:15 -05:00
Quincey Koziol
0695d6366a [svn-r27835] Description:
Sync w/trunk.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest not required on this branch)
2015-09-20 21:18:45 -05:00
Neil Fortner
d23cc2da70 [svn-r27806] Fix property list serialization for values encoded by H5Pset_chunk_cache to be
compatible between 32 and 64 bit systems.
Expand cross platform property list encode/decode testing.
Fix warning in H5P__fill_value_enc.

Tested: jam, koala, ostrich (h5committest), ummon
2015-09-16 14:55:38 -05:00
Neil Fortner
5d12a79db2 [svn-r27145] Add some testing for printf-style source dataset name resolution.
Various bug fixes, including a temporary fix for printf with FIRST_MISSING view.
Other cleanup.

Tested: ummon
2015-06-03 13:00:58 -05:00
Neil Fortner
bfc69905ac [svn-r26411] Add support for I/O in very simple cases (virtual mapping and file space are
both H5S_ALL).
Note make check  fails in h5dump test (unrelated to this checkin).

Tested: ummon
2015-03-09 16:59:50 -05:00
Neil Fortner
88b7d8d34c [svn-r26261] Commit working but incomplete prototype. Does not perform I/O.
Tested: ummon
2015-02-20 16:53:35 -05:00
Neil Fortner
1199ab1f48 [svn-r26198] INCOMPLETE, UNWORKING CODE
Commit progress through 1610 CST 2/17/15
2015-02-17 16:11:22 -05:00
Dana Robinson
5ae7ad342d [svn-r24993] Purpose:
Adds write tracking to the core VFD, which can be configured
via the H5Pset/get_core_write_tracking() API call. When enabled
and writing to the backing store is enabled, this feature will
track writes and only write out the changed bytes on flush/close.

Tested on:
    32-bit LE linux (jam) w/ Fortran and C++
    64-bit BE linux (ostrich)
    64-bit Darwin 12.5.0 (kite)

All were tested using the core VFD w/ paging on (core_paged
in the VFD list). Make check-vfd was also tested on jam.
2014-04-08 22:35:16 -05:00
Allen Byrne
c6fe8c70b2 [svn-r24932] HDFFV-8290: Remove unnecessary $(srcdir) and use AM_CPPFLAGS instead of INCLUDES. Update automake to 1.14.1
h5committest
2014-03-31 12:07:05 -05:00
Allen Byrne
819b8099e2 [svn-r24392] Cleanup testfiles from scripts. Update lists of files to be cleaned. CMake update to clean testfiles.
Tested: local cmake, autools, and h5committest
2013-11-01 16:15:37 -05:00
Raymond Lu
bada3f7a86 [svn-r23656] Issue 8380 H5Zunregister caused seg fault: I added some protection measures:
1. If any opened object uses the filter, let it fail.
  2. Flush all opened files to push any cached data to files.

Tested with h5committest.
2013-04-29 14:23:04 -05:00
Raymond Lu
72e84fcd82 [svn-r23513] I added a test case in plugin.c for testing using filter for groups and created a dummy filter library for this test case.
Tested on jam and koala.
2013-04-01 18:28:48 -05:00
Larry Knox
e679eed61b [svn-r23511] Replaced install-data-local with install-exec-hook in test/Makefile.am.
tested with h5committest
2013-04-01 17:45:02 -05:00
Raymond Lu
ed621aae38 [svn-r23494] I added another filter library dynlib2.c for plugin.c test. The test script moves the libdynlib2.so to /tmp then runs
plugin.c.

Tested on jam and koala.
2013-03-29 15:59:15 -05:00
Allen Byrne
5e5e9e3987 [svn-r23493] Correct improper addition 2013-03-29 15:46:48 -05:00