Commit Graph

16734 Commits

Author SHA1 Message Date
Allen Byrne
71c223c082 Move execeutable command after declaration 2017-05-17 13:09:13 -05:00
Allen Byrne
23d9fe2649 HDFFV-9055 add test files 2017-05-17 10:06:17 -05:00
Allen Byrne
3ee87f72ad HDFFV-9055 Handle H5T_ARRAY types
Create variables just for diff_array function
Whitespace updates
2017-05-16 15:58:17 -05:00
Allen Byrne
858155c19b Merge pull request #519 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '71637634ac96b6167b384ebb461ce3b9ea66b4f8':
  HDFFV-9995 Clarify help text
  HDFFV-10128 Fixed string length with no null fixed
2017-05-16 14:54:53 -05:00
Allen Byrne
71637634ac HDFFV-9995 Clarify help text 2017-05-16 10:16:44 -05:00
Allen Byrne
4f0b92bdd5 HDFFV-10128 Fixed string length with no null fixed 2017-05-16 09:28:49 -05:00
Dana Robinson
2e6d95a1a1 Updated the gnu-flags config file to remove gcc 3.x and 4.0 configurations
as well as other minor rework and cleanup.
2017-05-16 00:27:30 -04:00
Larry Knox
3e1a06e649 Merge pull request #516 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '56c3ec98207bb6c4b3e6a7b9523c2a1e849879c3':
  HDFFV-10128 add test to check null term Test is another dataset
  HDFFV-10128 Fix null term strings
2017-05-15 17:12:57 -05:00
Vailin Choi
8e8a30bdd4 Merge pull request #515 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '54dff331778a660824961fdf6359e4eae998a13c':
  Incorporate additional code changes for the H5DOread_chunk patch from GE Heathcare (HDFFV-9934) This is the similar set of changes that was checked in to 1.8 branch: Incorporate the code changes that were missing from the original patch: (1) Additional tests in hl/test/test_dset_opt.c (2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty Tested on platypus, ostrich, kituo, mayll, osx1010test, moohan, quail, emu.
2017-05-15 13:31:47 -05:00
Allen Byrne
56c3ec9820 HDFFV-10128 add test to check null term
Test is another dataset
2017-05-15 12:33:58 -05:00
Vailin Choi
54dff33177 Incorporate additional code changes for the H5DOread_chunk patch from GE Heathcare (HDFFV-9934)
This is the similar set of changes that was checked in to 1.8 branch:
Incorporate the code changes that were missing from the original patch:
(1) Additional tests in hl/test/test_dset_opt.c
(2) Fix in src/H5Dchunk.c for direct access when an entry is in chunk cache but not dirty
Tested on platypus, ostrich, kituo, mayll, osx1010test, moohan, quail, emu.
2017-05-15 10:25:15 -05:00
Allen Byrne
7078993d63 HDFFV-10128 Fix null term strings 2017-05-12 14:40:39 -05:00
Dana Robinson
5e60a0e10e Merge pull request #512 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop to develop
* commit 'f95ef72a5e9827dfa63e4722938a58a8c9d686c0':
  Merged HDFFV-10187 direct chunk overwrite bugfix to develop from 1.10 branch.
2017-05-11 23:26:06 -05:00
Dana Robinson
f95ef72a5e Merged HDFFV-10187 direct chunk overwrite bugfix to develop from 1.10 branch. 2017-05-11 23:31:57 -04:00
Allen Byrne
a23da99bdb Merge pull request #506 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '0cb8152b8e97d659e076b42340509c41b3919754':
  HDFFV-10186 Need to pull the flag into the script
2017-05-11 09:12:11 -05:00
Allen Byrne
0cb8152b8e HDFFV-10186 Need to pull the flag into the script 2017-05-11 09:03:21 -05:00
Allen Byrne
fcdf2ace7d Merge pull request #503 in HDFFV/hdf5 from ~BYRN/hdf5_adb:bugfix/HDFFV-10186-tbitnopaque-test to develop
* commit 'ec0935a924a84b18b29473b4fcec7c3f4e1aca76':
  HDFFV-10186 xml test also needs endianess aware files
  HDFFV-10186 - h5tools_str_append is not printf
  HDFFV-10186 braces formatting
  Fix reference file contents
  HDFFV-10186 Add endianess to bitfield and fix tests
2017-05-10 16:38:36 -05:00
Larry Knox
46937e9032 Merge pull request #505 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'c8a5520d3aa3a526460c81507f2f985dc534b14f':
  Call to H5Dopen has H5dopen2 arguments at line 12704 of test/dsets.c - changed to H5Dopen2 to fix failure with --with-default-api-version=v16 configure option.
2017-05-10 16:10:41 -05:00
lrknox
c8a5520d3a Call to H5Dopen has H5dopen2 arguments at line 12704 of test/dsets.c -
changed to H5Dopen2 to fix failure with --with-default-api-version=v16
configure option.
2017-05-10 14:44:58 -05:00
Allen Byrne
ec0935a924 HDFFV-10186 xml test also needs endianess aware files 2017-05-10 12:45:06 -05:00
Allen Byrne
7dc0c79c54 HDFFV-10186 - h5tools_str_append is not printf 2017-05-10 12:20:15 -05:00
Allen Byrne
dd45c3694f HDFFV-10186 braces formatting 2017-05-10 11:09:55 -05:00
Allen Byrne
772e6e9a7f Fix reference file contents 2017-05-10 11:00:37 -05:00
Allen Byrne
445c805a4c HDFFV-10186 Add endianess to bitfield and fix tests 2017-05-10 10:59:13 -05:00
Allen Byrne
9d50ed5287 Merge pull request #501 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit 'e4e261173f85de6f83651abd6950793d7b930a20':
  HDFFV-10186 more whitespace formatting
2017-05-10 10:46:37 -05:00
Allen Byrne
e4e261173f HDFFV-10186 more whitespace formatting 2017-05-10 10:12:19 -05:00
Allen Byrne
900a110c89 Merge pull request #497 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '4f36f613a6de09d8ec197b7e5a4a72dbdb9417a2':
  HDFFV-10186 Whitespace change Mostly tabs to spaces Remove Modifications comments
2017-05-10 08:48:46 -05:00
Vailin Choi
dc0276a81c Merge pull request #498 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '8482314d7db83c47947af8ca50457cdb1ddae366':
  Fix for HDFFV-10051 Fix missing declaration for H5D__layout_compact_dirty_test(). Tested on mayll and osx1010test.
2017-05-09 17:34:15 -05:00
Vailin Choi
8482314d7d Fix for HDFFV-10051
Fix missing declaration for H5D__layout_compact_dirty_test().
Tested on mayll and osx1010test.
2017-05-09 17:30:20 -05:00
Allen Byrne
4f36f613a6 HDFFV-10186 Whitespace change
Mostly tabs to spaces
Remove Modifications comments
2017-05-09 16:52:05 -05:00
Vailin Choi
e062a77e0e Merge pull request #494 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit 'd436db6c6efdfe7e9dbe06a642715116ef0eb5e3':
  Fix for the two issues reported in HDFFV-10051 Modifications made based on the review comments from pull request #494 Tested on moohan, mayll, kituo, platypus, ostrich, osx1010test, quail, emu.
  Fix for the two issues reported in HDFFV-10051: (1) Repeated open/close of a compact dataset fails due to the increment of ndims in the dataset structure for every open. --This is done only for chunked dataset via H5D__chunk_set_sizes(). (2) layout "dirty" flag for a compact dataset is not reset properly after flushing the data at dataset close. --Reset the "dirty" flag before flushing the message to the object header via H5O_msg_write(). Tested on moohan, kituo, platypus, ostrich, osx1010test, quail, emu.
2017-05-09 13:18:26 -05:00
Allen Byrne
850a5956c0 Merge pull request #496 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '5263bc9029dcf06779a0ec2b89688912443a4bfa':
  HDFFV-10186 Whitespace changes Mostly replacing tabs with spaces Removed empty mod sections
2017-05-09 12:41:38 -05:00
Allen Byrne
5263bc9029 HDFFV-10186 Whitespace changes
Mostly replacing tabs with spaces
Removed empty mod sections
2017-05-09 10:41:00 -05:00
Vailin Choi
d436db6c6e Fix for the two issues reported in HDFFV-10051
Modifications made based on the review comments from pull request #494
Tested on moohan, mayll, kituo, platypus, ostrich, osx1010test, quail, emu.
2017-05-08 22:14:20 -05:00
Vailin Choi
6a4f1187cc Fix for the two issues reported in HDFFV-10051:
(1) Repeated open/close of a compact dataset fails due to the
increment of ndims in the dataset structure for every open.
--This is done only for chunked dataset via H5D__chunk_set_sizes().
(2) layout "dirty" flag for a compact dataset is not reset
properly after flushing the data at dataset close.
--Reset the "dirty" flag before flushing the message to the object header
via H5O_msg_write().
Tested on moohan, kituo, platypus, ostrich, osx1010test, quail, emu.
2017-05-06 23:40:44 -05:00
Larry Knox
7916b84582 Merge pull request #491 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '28f4873e7fc93de865c3e180f09d7221569f64ff':
  Update one missed version string.
  Update release_docs/HISTORY-1_10.txt and RELEASE.txt after HDF5 1.10.1 release.
2017-05-05 16:58:26 -05:00
Allen Byrne
58e9796e38 Merge pull request #493 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '6d0d9d46dab559c04bba0b8810a3e0630ce44ad2':
  Fix typo in name of ddl file in command
2017-05-05 16:57:45 -05:00
Allen Byrne
6d0d9d46da Fix typo in name of ddl file in command 2017-05-05 16:54:28 -05:00
lrknox
28f4873e7f Update one missed version string. 2017-05-05 10:47:23 -05:00
lrknox
e2ad2751dc Update release_docs/HISTORY-1_10.txt and RELEASE.txt after HDF5 1.10.1
release.
2017-05-05 10:45:24 -05:00
Allen Byrne
494029c27d Merge pull request #490 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '9076e74d38f10d9d71a41ceeb118777468b6b530':
  Fix name to copy
2017-05-05 10:15:20 -05:00
Allen Byrne
9076e74d38 Fix name to copy 2017-05-05 10:05:59 -05:00
Allen Byrne
b8533e75af Merge pull request #488 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit 'c90f72a0d44ab53d16e0c7979363565dff30cf24':
  Correct name of file to copy
2017-05-04 16:47:45 -05:00
Allen Byrne
c90f72a0d4 Correct name of file to copy 2017-05-04 16:42:32 -05:00
Allen Byrne
e10313d556 Merge pull request #487 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '412f68103ecc9e75a895dd057ad28d0e456f3a58':
  Use correct var types for data
2017-05-04 14:10:37 -05:00
Allen Byrne
412f68103e Use correct var types for data 2017-05-04 13:32:58 -05:00
Allen Byrne
5d921b8fee Merge pull request #486 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '006e56802196ee6a43261aec7027815ad24ad3db':
  Remove duplicate defines
  Add test file to list and fix test typo
  Make test scripts fail if result files are created
2017-05-04 13:15:48 -05:00
Allen Byrne
006e568021 Remove duplicate defines 2017-05-04 11:41:47 -05:00
Allen Byrne
bcaf579ac4 Add test file to list and fix test typo 2017-05-02 15:54:40 -05:00
Allen Byrne
7608b264e4 Make test scripts fail if result files are created 2017-05-02 12:36:02 -05:00