bug fix
calling h5tools_get_fapl running the mpio driver caused H5FD_pl_copy to
fail silently in some conditions. a MPI call was made before MPI_Init.
solution: corrected the MPI call to be made after MPI_Init and added error return
conditions to H5FD_pl_copy and h5tools_get_fapl
tested on copper parallel, mir, shanti
h5ls uses -S flag to display datatype in a machine-readable form. Since
VMS is not a case sensitive system, triple quotes around S are needed; fixed.
h5ls -w80 -v -S tattr2.h5
test still reports failure due to line 311 in the tattr2.ls file "Modified: XXXX..."
Document it for now in the command file.
the last one
h5ls -w80 -v -S tattr2.h5
h5ls prints "native" for all types instead of the complete datatype definition.
I will look into the problem next.
Checkpoint further work on object deletion code for fractal heaps. I
believe everything is finally working for this sub-task. More regression tests
soon, but I don't foresee any problems.
Machines:
FreeBSD 4.11 (sleipnir)
Linux 2.4 (chicago)
Refactored object deletion code for fractal heap to fix scaling problems.
Passing all previous tests again now.
Tested:
FreeBSD 4.11 (sleipnir)
Linux 2.4 (chicago)
Mac OS X (amazon)
Upgrade
Description:
chnaged it from doing CVS-managed files to SVN-managed files.
(The use of ed, is real ugly, but ed exists in all Unix systems.
May want to consider using awk which is a more powerful and will have
a cleaner implementation.)
it uses the API function H5Gcopy to copy groups and datasets from file
to file, read from a command line
note: the test script is not finished yet
tested on heping, copper, shanti
Updates on windows
Tested with
VS C/C++ 6.0 and Compaq fortran 6.6c
VS .Net 2003
Because
1. New source files added to the library
2. New program to test "h5dump -b" option
all.dsw and all.sln need to be updated. all.sln is used only for hdf5bt_net.bat and hdf5bt_intelc.bat.
The previous check-in forgot including the dependency of a new project file.
Updates on windows
Some new source files are added to support new implementation of external links, hdf5dll.dsp needs to updated.
Tested with
VS C/C++ 6.0 and Compaq fortran 6.6c
VS .Net 2003
Some new source files are added to support new implementation of external links, hdf5.dsp needs to updated.
Tested with
VS C/C++ 6.0 and Compaq fortran 6.6c
VS .Net 2003
Because
1. New source files added to the library
2. New program to test "h5dump -b" option
all.dsw and all.sln need to be updated. all.sln is used only for hdf5bt_net.bat and hdf5bt_intelc.bat.
1) Added trace file support to the metadata cache. This allows capture
of all metadata cache calls in trace files for purposes of optimization
and debuging.
2) Added an expunge entry function. This allows an entry to be deleteded
from the cache without writing it to disk even if it is dirty.
3) Added a function call to resize pinned entries.
4) Added code to deal with entries that are dirty on load. This is
needed in support of a bug fix which can alter object headers on
load to repair files.
5) Added progress reporting code to the "MDC API smoke check" test in
cache_api.c. To enable the progress reporting, set report_progress
to TRUE in mdc_api_call_smoke_check().
Tested with h5committest, and a parallel test on phoenix (dual athelon
linux box).
adjustment
Description:
These tests (fheap, btree2) are under development and are not used by
the library yet. Move them to the end so that their failure do not block
other current library code tests.
Platforms tested:
heping.
Feature
Description:
Revised Link APIs.
Solution:
New link APIs use H5L*
H5*create_expand do not create links to the objects created; this must
be done manually with H5Llink.
Added APIs to link an object given its ID (H5Llink), to copy links (H5Lcopy),
and changed creation APIs (H5Lcreate_hard and H5Lcreate_soft) and query
API (H5Lget_linkinfo instead of H5Gget_objinfo).
All old APIs are still supported in H5Gdeprec.c .
Platforms tested:
sol, mir, copper
Misc. update:
Forgot to update MANIFEST and release docs. Will do after checkin.
The snapshot release directory was temporarily moved to a different
directory called unstable_format. Since the format is now back to
the normal one, reverse the release directory to the normal place too.
Platforms tested:
No test since it was a trivial change.
Code checkpoint
Description:
Revise fractal heap code to support deletions in up to 2nd level deep
indirect blocks. Needs some revisions to support deeper indirect blocks...
Platforms tested:
FreeBSD 4.11 (sleipnir)
Linux 2.4 (chicago)
h5committest
Description: Some "" were missing causing incorrect results in passing an argument
string.
Solution: Added missing ""
Platforms tested: VMS server.
There are still problems with the tests that have
"string" as an argument, for example:
-d "/g1/g1.1/dset1.1.2[0;2;10]" tall.h5
On VMS "g1" and "dset" are translated in upper case causing h5dump
to fail. After figuring out the correct amount of " for VMS I encountered
another problem: corresponding DDL file does not have "" around
/g1/g1.1/dset1.1.2..... and therefore VMS diff fails.
Question: Since command to h5dump is
h5dump -d "/g1/g1.1/dset1.1.2[0;2;10]" tall.h5, why the second line in the
tall-5s.ddl has
h5dump -d /g1/g1.1/dset1.1.2[0;2;10] tall.h5? If one types the command
without "", it fails on UNIX.
Misc. update:
Update windows project file
Description:
Eliminate the link to non-existing HL headers.
Solution:
Platforms tested:
windows MSVS 6.0
Won't affect other platforms and too minor to check with other windows compilers.
Misc. update:
Description: More work on the test script: added all current UNIX tests.
Solution:
Platforms tested: VMS server; many tests failed but I think it is false negative.
will investigate, but for now, let's save the code.
Misc. update:
Bug #281
Description:
The previous fix for bug #281 was not safe. Files got corrupted in
some cases. Needs a more comprehensive fix for it. Undo the unsafe
fix for now.
Platforms tested:
h5committested.
new feature
Description:
added support for h5dump to dump binary data using the file type format
added one test to the test script that tests this
Solution:
Platforms tested:
mir
shanti
copper
Misc. update:
Added/adjusted Test Express mode.
Description:
btree2:
Added TestExpress mode to skip some long tests (the 5th recursive and
the two random tests.)
fheap:
Changed the express mode messages to be more informative.
Un-excluded some tests from express mode.
Platforms tested:
Red Storm.
