Commit Graph

15636 Commits

Author SHA1 Message Date
Neil Fortner
62d7562fbd Merge branch 'develop' into talos-0176 2016-09-23 09:51:16 -05:00
Allen Byrne
08d84691ed Merge pull request #29 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit 'c635d463115efdd60bbcd9654644d6b298fd7cd3':
  Add missing command to set shared generated file
2016-09-19 10:21:36 -05:00
Allen Byrne
c635d46311 Add missing command to set shared generated file 2016-09-19 10:20:49 -05:00
Allen Byrne
99d6246fc2 Merge pull request #27 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '3585b373508ca5ea940fbf6e7d0ffeed1968a6bf':
  Add default site names
  Separate fortran generation into static and shared folders.
2016-09-19 09:28:52 -05:00
Allen Byrne
3585b37350 Add default site names 2016-09-16 15:57:28 -05:00
Allen Byrne
8efb84b9a8 Separate fortran generation into static and shared folders. 2016-09-16 15:21:43 -05:00
Allen Byrne
6d5ee49ff3 Merge pull request #26 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit 'bea6ab9ea44eab3503e7fc3c6f1e7ea0d7c1557a':
  Revert to using old set command
2016-09-16 11:24:44 -05:00
Allen Byrne
bea6ab9ea4 Revert to using old set command 2016-09-16 11:23:38 -05:00
Allen Byrne
1a617e3c5d Merge pull request #25 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '6a3551eba007e826968361d3525cfa2b9139e553':
  Change string to list - older usage
2016-09-16 10:09:20 -05:00
Allen Byrne
6a3551eba0 Change string to list - older usage 2016-09-16 10:08:36 -05:00
Allen Byrne
fc57f73409 Merge pull request #23 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '1963f50928089c0ec4a1ff11d54f652a4ab0a498':
  Add option to submit to Cdash
  Change UPDATE_TYPE to git
  Update CMake java functions
2016-09-15 16:11:44 -05:00
Allen Byrne
1963f50928 Add option to submit to Cdash 2016-09-15 16:07:08 -05:00
Allen Byrne
a6bff1b7eb Change UPDATE_TYPE to git 2016-09-15 13:32:26 -05:00
Allen Byrne
04634520cf Update CMake java functions 2016-09-15 13:32:01 -05:00
Binh-Minh Ribler
052efd9bde Merge pull request #11 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_cppapi:develop to develop
Purpose: Code cleanup
Description:
    - Used FP_EPSILON in comparing float values to verify read data
    - Casted C macro to fix mismatched types in verify_val calls
Platforms tested:
    Linux/32 2.6 (jam), Linux/64 (platypus), Darwin (osx1010test)

* commit '478f771243b4e7b7c416dde22b5dcde13e1f3541':
  Purpose: Code cleanup Description:     - Used FP_EPSILON in comparing float values to verify read data     - Casted C macro to fix mismatched types in verify_val calls Platforms tested:     Linux/32 2.6 (jam)     Linux/64 (platypus)     Darwin (osx1010test)
2016-09-07 12:25:34 -05:00
Larry Knox
e2f7b36b36 Merge pull request #18 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '03169f5b19e64ab568e13bc883ef5047542b632e':
  Restrict git commit hash in tar file names to first 7 characters with --short option.
2016-09-06 14:05:33 -05:00
Allen Byrne
2c6720aacb Merge pull request #17 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '9bcb5305db7226d06076aef5aada8c07fff1c41c':
  Add longer timeout to cache tests - test has consistently exceeded default timing.
2016-09-06 14:05:03 -05:00
lrknox
03169f5b19 Restrict git commit hash in tar file names to first 7 characters with
--short option.
2016-09-06 13:14:45 -05:00
Allen Byrne
9bcb5305db Add longer timeout to cache tests - test has consistently exceeded
default timing.
2016-09-06 10:13:28 -05:00
Larry Knox
d9489260e4 Merge pull request #14 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '49ea5bd2a9f23d53f94377457376c91f51e1d287':
  Removed -p option from invocation of autogen.sh by h5vers script to allow running h5vers on machines without /usr/hdf/bin/AUTOTOOLS.
2016-09-02 15:52:23 -05:00
lrknox
49ea5bd2a9 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop 2016-09-02 15:42:31 -05:00
lrknox
78096ab08a Removed -p option from invocation of autogen.sh by h5vers script to
allow running h5vers on machines without /usr/hdf/bin/AUTOTOOLS.
2016-09-02 15:40:53 -05:00
Larry Knox
f6e22b669e Merge pull request #12 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '1bad18cc24e0108dea2a9e48402bba9d32e3b96c':
  Add bin/pkgscrpts files to MANIFEST.
  dd bin/pkgscrpts directory with scripts to package deployed unix binaries into tarfiles.
2016-09-02 13:07:11 -05:00
lrknox
1bad18cc24 Add bin/pkgscrpts files to MANIFEST. 2016-09-02 12:57:27 -05:00
lrknox
96e9dccf3e dd bin/pkgscrpts directory with scripts to package deployed unix binaries
into tarfiles.
2016-09-02 11:02:10 -05:00
Larry Knox
eb45597647 Merge pull request #9 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-9978-build-scripts-release-bbrelease to develop
* commit 'a4c60918a741e029c9ace1a8737f414cc0f49903':
  Added .gitignore and .gitattributes files with contents from the last git mirror or the hdf5 repository prior to the manual migration of the hdf5 svn repository to the git repository in bitbucket. Added entries to MANIFEST for the 2 new files.
2016-09-02 08:40:59 -05:00
Binh-Minh Ribler
478f771243 Purpose: Code cleanup
Description:
    - Used FP_EPSILON in comparing float values to verify read data
    - Casted C macro to fix mismatched types in verify_val calls
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-09-01 22:14:22 -05:00
Neil Fortner
b1eb1b3ee8 Replace assertion in H5O_dtype_decode_helper for number of array dimensions with a check and error. The assertion was inappropriate because it is operating on data read from the file, which the library does not always have direct control of. 2016-09-01 17:24:24 -05:00
lrknox
a4c60918a7 Added .gitignore and .gitattributes files with contents from the last
git mirror or the hdf5 repository prior to the manual migration of the
hdf5 svn repository to the git repository in bitbucket.
Added entries to MANIFEST for the 2 new files.
2016-09-01 16:15:15 -05:00
Allen Byrne
130e0a6638 Merge pull request #7 in HDFFV/hdf5 from ~BYRN/hdf5_adb:bugfix/HDFFV-9431-cpp_testhdf5 to develop
* commit '9842d2ae5f5956ea29e55c4e8d4ce9709882c879':
  Add VFD name to test folder
2016-09-01 15:22:17 -05:00
Allen Byrne
9842d2ae5f Add VFD name to test folder 2016-09-01 11:08:18 -05:00
Larry Knox
09642faf32 Merge pull request #6 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-9978-build-scripts-release-bbrelease to develop
* commit '5372b04bab6e36df2c3aa641307c2a93eccc35e9':
  Merge pull request #4 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_8 to hdf5_1_8
2016-08-31 12:38:54 -05:00
Larry Knox
5372b04bab Merge pull request #4 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_8 to hdf5_1_8
* commit '5aee5213190f145b5a734f5dc76a67c82f7d6b82':
  emoved .gitattributes and .gitignore, as the manual migration did not create them. Corrected bbrelease script  to create new release version with revision hash.
  Translate svn commands to git commands for chkmanifest and bbrelease scripts with source in git repository. Removed the -p option from the command to run autogen.sh.  It interfered with running chkmanifest on a machine with the correct autotools versions but without access to /usr/hdf/bin/AUTOTOOLS.  The autogen.sh script says the option is for HDF group use only and is likely to be removed.  The same effect can be achieved by adding /usr/hdf/bin/AUTOTOOLS to the beginning of PATH.
  Removed the -p option from the command to run autogen.sh.  It interfered with running chkmanifest on a machine with the correct autotools versions but without access to /usr/hdf/bin/AUTOTOOLS.  The autogen.sh script says the option is for HDF group use only and is likely to be removed.  The same effect can be achieved by adding /usr/hdf/bin/AUTOTOOLS to the beginning of PATH.
2016-08-31 12:17:06 -05:00
Larry Knox
095d4fd2cb Merge pull request #3 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-9978-build-scripts-release-bbrelease to develop
* commit 'b368f0de8d53ca536e95f71d88504cd1ee3ea33c':
  Removed the -p option from the command to run autogen.sh.  It interfered with running chkmanifest on a machine with the correct autotools versions but without access to /usr/hdf/bin/AUTOTOOLS.  The autogen.sh script says the option is for HDF group use only and is likely to be removed.  The same effect can be achieved by adding /usr/hdf/bin/AUTOTOOLS to the beginning of PATH.
2016-08-31 11:49:21 -05:00
Allen Byrne
dce6ead200 Merge pull request #2 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '203b2b2e75816bfd0f4d54ecd2cb1f41b1247447':
  Windows returns -1 instaed of 255 as on linux for the test
2016-08-30 12:56:46 -05:00
lrknox
b368f0de8d Removed the -p option from the command to run autogen.sh. It interfered
with running chkmanifest on a machine with the correct autotools
versions but without access to /usr/hdf/bin/AUTOTOOLS.  The autogen.sh
script says the option is for HDF group use only and is likely to be
removed.  The same effect can be achieved by adding
/usr/hdf/bin/AUTOTOOLS to the beginning of PATH.
2016-08-30 10:58:12 -05:00
Allen Byrne
203b2b2e75 Windows returns -1 instaed of 255 as on linux for the test 2016-08-30 10:27:07 -05:00
Allen Byrne
3b878ea9d9 Merge pull request #1 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:HDFFV-9978-build-scripts-release-bbrelease to develop
* commit 'ba5652ffc27be96fa7275b039ce2c8e249751657':
  Translate svn commands to git commands for chkmanifest and bbrelease scripts with source in git repository.
2016-08-29 17:01:20 -05:00
lrknox
ba5652ffc2 Translate svn commands to git commands for chkmanifest and bbrelease
scripts with source in git repository.
2016-08-29 16:42:53 -05:00
Allen Byrne
b947f7e911 [svn-r30321] HDFFV-9974: Correct parsing of UD filter parameters.
Verified by user, who reported issue.
2016-08-25 13:57:27 -05:00
Vailin Choi
169014d154 [svn-r30319] Fix for daily test failure on emu -m64 for the checkin #30310.
Tested on emu (-m64 & -m32), platypus, mayll, moohan, osx1010test, quail, kituo, ostrich, kite.
2016-08-24 15:12:18 -05:00
Allen Byrne
42d55a0f7d [svn-r30318] whitespace cleanup 2016-08-24 14:50:39 -05:00
Allen Byrne
2d6dd8ea64 [svn-r30317] Whitespace cleanup 2016-08-24 14:47:56 -05:00
Allen Byrne
4b471dea84 [svn-r30316] Use dns name for CDash instead of ip address 2016-08-22 13:31:38 -05:00
Allen Byrne
241dc68b48 [svn-r30315] HDFFV-9972: Fix test reference and change default for H5Iget_name in JNI API. 2016-08-22 13:07:01 -05:00
Allen Byrne
3c331b231a [svn-r30314] HDFFV-9971: Change the usage of a CMake variable for the build type to the recommended variable name. Updated documentation. 2016-08-22 12:22:38 -05:00
Allen Byrne
737bb56735 [svn-r30313] HDFFV-9972: unsatisfied link error under debug on Windows.
Added windows name suffix for debug to CMake cmd_arg for examples and test.
Fix issues discovered under debug testing;
   Create a version of H5Iget_name that correctly returns the name.
   Rework PIN_JAVA_STRING macro and usage to eliminate possible memory leaks by using if-else instead of mid-routine return.
   Update example to use new H5Iget_name API.
   
   Tested: windows under debug
2016-08-22 12:05:00 -05:00
Allen Byrne
f14e4b3e20 [svn-r30312] HDFFV-9706: Commit changes as discussed in HDF5-379. 2016-08-22 11:36:59 -05:00
Binh-Minh Ribler
b1c4fd77d9 [svn-r30311] Purpose: Fix bug HDFFR-9920 cont.
trunk:
Description:
    Continued rearranging the classes to model the relationship of HDF5
    objects more accurately.  The changes included:
    - in the baseclass list of Attribute, changed "public IdComponent" to
      "public H5Location", because location sometime can be specified with
      attribute
    - moved H5A wrappers in H5Location to H5Object because H5A functions
      can't be called on attribute id
    - removed the stubs Attribute::iterateAttrs and Attribute::renameAttr
    - removed Attribute::getFileName and Attribute::flush, because
          H5Location has them
    - result of the modified partial class diagram, regarding Attribute

                                IdComponent
                                     |
                                H5Location   AbstractDs
                                /       \   /
                        H5Object     Attribute
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-08-22 01:29:29 -05:00
Vailin Choi
ae18cf66d8 [svn-r30310] Fix daily test failure for previous checkin #30308.
Tested on platypus and mayll.
2016-08-21 19:21:20 -05:00