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Author SHA1 Message Date
Dana Robinson
5ce2a17804 Removes staff email addresses from the repository 
Removes redundant C library headers from hl library
 2020-08-06 17:58:07 -07:00
Dana Robinson
72363de1c0 Merge pull request #2730 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:file_locking_squash_2 to develop 
* commit '47ad0ac7237b464e939fe54dd129a151944d9706':
  Renames BEST-EFFORT to BEST_EFFORT for file locking env var
  Updated the file locking Fortran property list wrappers and added a test.
  Fixed missing parens in VFDs
  Minor change to header comments in file locking C++ changes.
  Squash merge of file locking fixes
 2020-08-06 18:31:41 -05:00
Dana Robinson
47ad0ac723 Renames BEST-EFFORT to BEST_EFFORT for file locking env var 2020-08-06 15:09:59 -07:00
Dana Robinson
7391f5f26c Merge branch 'develop' into file_locking_squash_2 2020-08-06 15:08:28 -07:00
Jerome Soumagne
302dfeb11b Merge pull request #2715 in HDFFV/hdf5 from ~JSOUMAGNE/hdf5:fix_vlen_ref to develop 
* commit 'ef6db167a86e6c065d46963dbd75cd325fe83813':
  H5R: fix encoding of references that are part of compound types
 2020-08-06 14:22:29 -05:00
Dana Robinson
ee274b97f8 Merge pull request #2738 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop 
* commit '91ca481ff152e7a6b0326fcdb59e506141d2d32a':
  Reverts H5FDsplitter.c changes so they don't conflict with Quincey's big cleanup patch
  Fixes -Wnull-dereference warnings around the cache logging calls
  Fixes -Wnull-dereference warning in hl/src/H5DS.c
  Adds -Wnull-dereference to the warnings we ignore in flex/bison generated code (that we have no control over).
  Fixes warnings in the splitter VFD and tests
 2020-08-06 14:11:16 -05:00
Dana Robinson
91ca481ff1 Reverts H5FDsplitter.c changes so they don't conflict with Quincey's 
big cleanup patch
 2020-08-06 08:41:27 -07:00
Dana Robinson
bd6f3bcdab Fixes -Wnull-dereference warnings around the cache logging calls 2020-08-05 23:14:40 -07:00
Dana Robinson
b1c78579da Fixes -Wnull-dereference warning in hl/src/H5DS.c 2020-08-05 22:56:15 -07:00
Dana Robinson
e327843f7a Adds -Wnull-dereference to the warnings we ignore in flex/bison 
generated code (that we have no control over).
 2020-08-05 22:51:34 -07:00
Dana Robinson
8e7f3e38a7 Fixes warnings in the splitter VFD and tests 2020-08-05 22:13:38 -07:00
Dana Robinson
482ade4657 Merge pull request #2737 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop 
* commit '65e92e1d56dd2e04ebe7b7713fee9e9e38cd8849':
  Warning fixes in tools and h5test.c
 2020-08-05 21:35:41 -05:00
Dana Robinson
65e92e1d56 Warning fixes in tools and h5test.c 2020-08-05 17:15:57 -07:00
Dana Robinson
f59bb712de Merge pull request #2733 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop 
* commit 'be02566f49f953bc80c5b5018871138e201ea633':
  Fixes indenting in tools test scripts
 2020-08-04 12:12:45 -05:00
Dana Robinson
be02566f49 Fixes indenting in tools test scripts 2020-08-04 09:14:36 -07:00
Dana Robinson
b2c90cc84e Updated the file locking Fortran property list wrappers and added 
a test.
 2020-08-03 18:43:19 -07:00
Dana Robinson
bd685b0e80 Fixed missing parens in VFDs 2020-08-03 15:47:46 -07:00
Dana Robinson
6e71992502 Minor change to header comments in file locking C++ changes. 2020-08-03 09:35:17 -07:00
Dana Robinson
bc1bed2c55 Squash merge of file locking fixes 2020-08-03 09:11:27 -07:00
Dana Robinson
33c0016eb6 Merge pull request #2727 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop 
* commit 'b9de162eae800a9459f0f1f07d2b043f73f8a907':
  Minor normalizations with 1.12 branch
  Fixed bad parens in H5trace.c
 2020-08-02 18:22:54 -05:00
Dana Robinson
b9de162eae Minor normalizations with 1.12 branch 2020-08-01 10:26:22 -07:00
Dana Robinson
4486905131 Merge branch 'develop' into develop_minor 2020-08-01 10:26:11 -07:00
Dana Robinson
66ce984dee Merge pull request #2723 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop 
* commit '08dca47475f41e93348cf0c2ea708e787c232014':
  Minor normalizations with hdf5_1_10
 2020-08-01 11:36:59 -05:00
Dana Robinson
64ffb37ff6 Fixed bad parens in H5trace.c 2020-07-31 12:23:57 -07:00
Dana Robinson
08dca47475 Minor normalizations with hdf5_1_10 2020-07-31 11:40:29 -07:00
Allen Byrne
5007f82225 Merge pull request #2722 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'fc57490e02835ddfce644135e93e893f77b379d3':
  Mingw copy disabled
 2020-07-31 13:26:17 -05:00
Allen Byrne
fc57490e02 Mingw copy disabled 2020-07-31 07:50:11 -05:00
Dana Robinson
50f404c887 Merge pull request #2720 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop 
* commit 'c8ba30d965f0342e5725a11cb562dfb22c8a8d24':
  Minor normalization with 1.10 branch
 2020-07-30 20:16:17 -05:00
Dana Robinson
c8ba30d965 Merge branch 'develop' into develop_minor 2020-07-30 15:23:54 -07:00
Allen Byrne
88aa0d5c76 Merge pull request #2718 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'ff4a9d0ec2e85cf15f769006e92e756a79869ab8':
  Warnings reduction in tools
 2020-07-30 11:46:39 -05:00
Allen Byrne
ff4a9d0ec2 Warnings reduction in tools 2020-07-30 11:26:14 -05:00
Allen Byrne
2ece66e999 Merge pull request #2716 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '6a1cf090c6a2f970084c714a2f75a31d68a0a6a8':
  Correct reference file
  Correct h5diff filenames
 2020-07-29 15:40:05 -05:00
Allen Byrne
6a1cf090c6 Correct reference file 2020-07-29 12:56:03 -05:00
Allen Byrne
1f7fa50137 Correct h5diff filenames 2020-07-29 08:24:30 -05:00
Binh-Minh Ribler
cf4e78b3c9 Merge pull request #2711 in HDFFV/hdf5 from bmr-HDFFV-11120 to develop 
Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)

* commit '707e30c6be1954c0027374124207e46caae68cbc':
  Fixed typos in error messages.
  Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869)
 2020-07-28 19:08:19 -05:00
Jerome Soumagne
ef6db167a8 H5R: fix encoding of references that are part of compound types 
Add corresponding test and some debug information
 2020-07-28 16:36:19 -05:00
Binh-Minh Ribler
707e30c6be Fixed typos in error messages. 2020-07-28 12:20:13 -05:00
Dana Robinson
b201a78b33 Merge pull request #2714 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5s_set_extent_none to develop 
* commit 'e4603ff8a171e82de6373ba6eddcf59d5eeab5aa':
  Updated the Java tests to deal with H5Sset_extent_none changes
  Fixed additional typos in tselect.c comments.
  Fixes typo in tselect.c
  Updates H5Sset_extent_none() to set H5S_NULL
 2020-07-28 11:29:04 -05:00
Dana Robinson
e4603ff8a1 Updated the Java tests to deal with H5Sset_extent_none changes 2020-07-28 08:28:38 -07:00
Allen Byrne
10e59f6ba4 Merge pull request #2697 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '5857bb817019b8513f796c9564de3f1845f9a44a':
  Only one line needed to compare
  Revert err file
  revert error-stack enable
  Add release notes for tools
  add test file ext
  Correct file name in test
  Tools refactor
 2020-07-28 07:13:18 -05:00
Dana Robinson
c78326eb92 Fixed additional typos in tselect.c comments. 2020-07-27 17:40:25 -07:00
Dana Robinson
dbba42c306 Fixes typo in tselect.c 2020-07-27 17:38:41 -07:00
Dana Robinson
91f5320ff0 Updates H5Sset_extent_none() to set H5S_NULL 
The API call used to set the internal H5S_NO_CLASS value which
produced errors when such a dataspace was passed to many other API
calls.

Fixes HDFFV-11027
 2020-07-27 17:32:01 -07:00
Allen Byrne
5857bb8170 Only one line needed to compare 2020-07-27 16:15:50 -05:00
Allen Byrne
799f2891c2 Revert err file 2020-07-27 15:47:10 -05:00
Dana Robinson
6e740457cc Minor normalization with 1.10 branch 2020-07-27 11:09:05 -07:00
Binh-Minh Ribler
303be6d7de Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into bmr-HDFFV-11120 2020-07-22 16:15:47 -05:00
Binh-Minh Ribler
88e458ac43 Fix HDFFV-11120 and HDFFV-11121 (CVE-2018-13870 and CVE-2018-13869) 
Description:
    When a buffer overflow occurred because a name length was corrupted
    and became very large, h5dump produced a segfault on one file and a
    memcpy parameter overlap on another file.  This commit added checks
    that detect a read pass the end of the buffer to prevent these error
    conditions.
Platforms tested:
    Linux/64 (jelly)
    SunOS 5.11 (emu)
 2020-07-22 16:13:26 -05:00
Allen Byrne
e0b86594c2 revert error-stack enable 2020-07-20 16:46:49 -05:00
Allen Byrne
c0bc9d0e60 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '74e09473c825610d203565e5ed9deb156256d6ea':
  Minor normalization with 1.10.
 2020-07-20 14:08:55 -05:00