Commit Graph

3367 Commits

Author SHA1 Message Date
Dana Robinson
2bd041f878 Added H5Fdelete call and VOL support (but no VFD/native implementation). 2019-06-11 09:04:23 -07:00
Dana Robinson
a18727bc77 Added a VOL initialization property list type. 2019-06-05 04:34:36 -07:00
Neil Fortner
35a8a549f6 Refactor H5S__hyper_project_intersection to operate directly on span
trees, improving performance and removing the conditionn that the
extents be equal.
2019-05-31 19:26:56 -05:00
Dana Robinson
0afb76228e Added code that disallows unregistering the native VOL connector. 2019-05-24 13:39:45 -07:00
Allen Byrne
0b086c3db2 Correct message command syntax 2019-05-17 15:14:20 -05:00
Quincey Koziol
206276d6f4 Merge pull request #1605 in HDFFV/hdf5 from merge_hyperslab_update_01 to develop
* commit '08b009cc4ab2a8d8d289697d6d4688c0e5c53c6e':
  Clean up if-else chain.
  Remove thread-local copy of hyperslab operation generation value.
  Core changes to selection code from the hyperslab_updates branch.
2019-04-29 21:33:17 -05:00
Quincey Koziol
08b009cc4a Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01 2019-04-29 17:51:55 -05:00
Dana Robinson
0c896fcdf9 Missed an env check before strcmp. 2019-04-29 14:50:13 -07:00
Dana Robinson
5c234fb5fd Merge pull request #1677 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:is_accessible_test_love to develop
* commit 'e66bf948a7acba0ddc76239f6d02f17c8b10eb0f':
  Fix for split VFD and file cleanup when testing H5Fis_hdf5 and H5Fis_accessible in tfile.c.
  Improvements to the H5Fis_accessible() and H5Fis_hdf5() tests in tfile.c. * General code tidying. * Expanded tests to work with multi-file VFDs.
2019-04-26 15:59:34 -05:00
Dana Robinson
e66bf948a7 Fix for split VFD and file cleanup when testing H5Fis_hdf5
and H5Fis_accessible in tfile.c.
2019-04-26 12:10:54 -07:00
Allen Byrne
61e171cad3 Merge pull request #1678 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit 'e2eaac93386feadef194962cb258e660038d39f1':
  ESE-97 add vol_plugin test to CMake builds
2019-04-26 10:01:00 -05:00
Songyu Lu
2c9025dcb9 HDFFV-10760 Skipping external_env.c and vds_env.c for CMake to do VOL check and VFD check. Temporarily skipping external_env.c and vds_env.c for VFD check and VOL check in CMake following the example of links_env. Leave them for future work. 2019-04-25 11:55:45 -05:00
Allen Byrne
e2eaac9338 ESE-97 add vol_plugin test to CMake builds 2019-04-25 10:44:06 -05:00
Dana Robinson
568c3624de Improvements to the H5Fis_accessible() and H5Fis_hdf5() tests
in tfile.c.
* General code tidying.
* Expanded tests to work with multi-file VFDs.
2019-04-25 01:07:42 -07:00
Songyu Lu
562e8ec915 Changing file names and directory names to avoid possible conflict during parallel 'make check'. 2019-04-23 16:40:02 -05:00
Quincey Koziol
544a36e75e Merge pull request #1666 in HDFFV/hdf5 from ~KOZIOL/hdf5:unwrap_vol_callback to develop
* commit '62198c2436ac3787afb49fa990d1ba8204264dba':
  Add an 'unwrap' VOL callback, so that connectors can unwrap an underlying object without closing it.  (Especially needed for pass-through connectors)
2019-04-23 11:06:04 -05:00
Songyu Lu
2c47094d40 Changing file names to avoid possible conflicts during parallel test. 2019-04-22 10:23:38 -05:00
Quincey Koziol
62198c2436 Add an 'unwrap' VOL callback, so that connectors can unwrap an underlying
object without closing it.  (Especially needed for pass-through connectors)
2019-04-21 14:45:54 -05:00
Songyu Lu
f42b6ace18 Changing output file names to avoid possible conflict during parallel build and test, especially on jelly. 2019-04-19 12:55:39 -05:00
Songyu Lu
cd9e9a1b5a Minor fix: marking an internal function of the test for export. 2019-04-18 14:23:24 -05:00
Vailin Choi
11c8c98352 Merge pull request #1654 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/HDFFV-10579-h5arename-function-fails-when to develop
* commit '53a5c3be903ce7c24d02a6bd3a8d9b07a3f82404':
  Change the checking to H5I_INVALID_HID in test_attr_dense_rename().
  Fix for HDFFV-10579 H5Arename fails when creation order of attributes is tracked. The attribute needs to be removed from the creation order index v2 B-tree before re-inserting the renamed attribute via H5A__dense_insert().
2019-04-18 13:15:14 -05:00
Allen Byrne
cc5f91d1d2 Fix CMake errors 2019-04-18 11:35:11 -05:00
Ray Lu
bdb11caa53 Merge pull request #1600 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:HDFFV-10658-performance-drop-from-1-8 to develop
* commit 'b5ef82a1786605ae86502bc82086047720b7d4ca': (21 commits)
  Moving the handling of null prefix into H5_combine_path.
  Changing the prefix of external file and VDS from empty string to null for performance improvement.
  Improving the condition checking of empty string.
  Replacing string operation strdup with assignment for empty string.
  Adding back links_env.out which I accidentally removed in my previous commit.
  Taking out two unnecessary diff output files.
  Taking out unnecessary diff files for output.
  Adding some comments.
  Some coding style changes.
  Adding the standard output files for the external_env.c and vds_env.c tests.
  Small correction for my previous commit.
  Forgot to add external_common.c and external_common.h.
  Updated CMake for the splitting of external.c and vds.c.
  Minor fix: removal of unnecessary enum values.
  Minor fixes: updating the test vds_env.c according to the set up of vds.c.
  Left out this file in previous commit.
  HDFFV-10658 - setting and getting properties in API context: 1. switched to use the existing H5F_prefix_open_t for enum type; 2. put the common private function used by external.c and external_env.c into external_common.c
  This commit basically has the following changes: 1. restored the datatype, dataspace, and LCPL of the dataset for VOL connector back to the properties. 2. splitted external.c and vds.c because they called HDsetenv in the program, instead using shell scripts to set the environment variables. 3. changed H5CX_get_vds_prefix and H5CX_get_ext_file_prefix to use H5P_peek instead of H5P_get.
  HDFFV-10658: I left out this file in my previous commit.
  HDFFV-10658: 1. moving HDgetenv to dataset initialization stage to reduce the overhead; 2. restoring the retrieval of three vol properties to H5P_get instead of using API context to prepare for Quincey's upcoming refactoring work.
  ...
2019-04-18 10:25:18 -05:00
Vailin Choi
53a5c3be90 Change the checking to H5I_INVALID_HID in test_attr_dense_rename(). 2019-04-16 11:47:13 -05:00
Allen Byrne
68bddef35d HDFFV-10741 - remove SKIP_ERRSTK_TESTS option 2019-04-15 14:46:23 -05:00
Dana Robinson
5d3d1da927 Merge pull request #1652 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:check_passthrough_vol to develop
* commit '9ee3d472113fc3e66ef34e40a0990ed07a2824bc':
  Renamed the HDF5_TEST_VOL option to HDF5_TEST_PASSTHROUGH_VOL.
  Renamed the autotools check-vol target to check-passthrough-vol.
2019-04-15 13:43:16 -05:00
Songyu Lu
6fdf7008c1 Adding back links_env.out which I accidentally removed in my previous commit. 2019-04-15 09:39:57 -05:00
Songyu Lu
bd137d2c59 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~songyulu/hdf5_ray into HDFFV-10658-performance-drop-from-1-8 2019-04-15 09:28:12 -05:00
Vailin Choi
4e05249f98 Fix for HDFFV-10579 H5Arename fails when creation order of attributes is tracked.
The attribute needs to be removed from the creation order index v2 B-tree before
re-inserting the renamed attribute via H5A__dense_insert().
2019-04-12 14:51:37 -05:00
Quincey Koziol
2eac0fccbc Add H5Fget_fileno() API routine. 2019-04-11 22:22:21 -05:00
Songyu Lu
02cc5ba678 Merge branch 'HDFFV-10658-performance-drop-from-1-8' of https://bitbucket.hdfgroup.org/scm/~songyulu/hdf5_ray into HDFFV-10658-performance-drop-from-1-8 2019-04-11 17:32:00 -05:00
songyulu
0243449188 Taking out two unnecessary diff output files. 2019-04-11 17:23:04 -05:00
Songyu Lu
d6ada6ff1f Taking out unnecessary diff files for output. 2019-04-11 16:50:06 -05:00
Songyu Lu
1d1e96f1dd Some coding style changes. 2019-04-11 15:51:21 -05:00
Dana Robinson
9ee3d47211 Renamed the HDF5_TEST_VOL option to HDF5_TEST_PASSTHROUGH_VOL. 2019-04-11 11:27:12 -07:00
Songyu Lu
c3c3c1e142 Adding the standard output files for the external_env.c and vds_env.c tests. 2019-04-11 12:59:07 -05:00
Songyu Lu
a58c01aac1 Small correction for my previous commit. 2019-04-11 10:19:45 -05:00
Songyu Lu
c0e05f0747 Forgot to add external_common.c and external_common.h. 2019-04-10 16:48:42 -05:00
Songyu Lu
417cd9da87 Updated CMake for the splitting of external.c and vds.c. 2019-04-10 16:02:28 -05:00
Songyu Lu
06002f8c22 Minor fixes: updating the test vds_env.c according to the set up of vds.c. 2019-04-10 10:21:38 -05:00
Songyu Lu
c0b13e078e Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~songyulu/hdf5_ray into HDFFV-10658-performance-drop-from-1-8 2019-04-09 18:11:06 -05:00
Songyu Lu
04d07d967a Left out this file in previous commit. 2019-04-09 17:40:24 -05:00
Songyu Lu
477dda3c0d HDFFV-10658 - setting and getting properties in API context:
1. switched to use the existing H5F_prefix_open_t for enum type;
2. put the common private function used by external.c and external_env.c into external_common.c
2019-04-09 16:20:19 -05:00
Vailin Choi
3ccc98e256 Modifications based on PR feedback:
(1) Add H5Sdeprec.c to src/CMakeLists.txt
(2) Add test for H5Sencode1.
2019-04-08 12:33:45 -05:00
Songyu Lu
d8ff8da46c Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~songyulu/hdf5_ray into HDFFV-10658-performance-drop-from-1-8 2019-04-08 11:17:59 -05:00
Vailin Choi
2886cd9e45 HDFFV-10365: Changes as described in the RFC: H5Sencode/H5Sdecode Format Change.
This also addresses HDFFV-10255: H5Sencode/decode performance issue.
2019-04-06 16:55:14 -05:00
Quincey Koziol
92f30fd3d9 Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01 2019-04-06 16:20:55 -05:00
Vailin Choi
7fe665ebff Fix for HDFFV-10271 hyperslab encoding incorrect length. 2019-04-05 11:34:58 -05:00
Quincey Koziol
ef7f3ef177 Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01 2019-04-05 10:35:38 -05:00
Quincey Koziol
dde0a1c93a Merge remote-tracking branch 'origin/develop' into merge_hyperslab_update_01 2019-04-04 16:45:34 -05:00