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Author SHA1 Message Date
Allen Byrne
98c8c6e45b Mostly whitespace in testpar, addl changes for tmp dir 2019-08-15 10:28:40 -05:00
Allen Byrne
f5a250e77c Whitespace cleanup 2019-08-15 09:03:03 -05:00
Dana Robinson
6b8d369a0c Merge pull request #1873 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:H5Pset_fapl_mpi to develop 
* commit 'bd8da502cf5b763433e3c628a4043a4264529cec':
  Some refactoring prior to implementing new H5P MPI functions. * Macro cleanup and obvious warning fixes in parallel code. * Moved H5FD comm and info dup/free wrapper code to a new H5mpi.c file   and separated it to deal with each MPI type separately.
 2019-08-14 19:34:56 -05:00
Dana Robinson
300372ce33 Merge pull request #1874 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5s_api_for_daos to develop 
* commit 'c490fefbc3199d45fa4d3af09dd567671a244e8d':
  Added public H5Sselect_adjust_u and H5Shyper_adjust_s calls.
 2019-08-14 19:33:19 -05:00
Jerome Soumagne
2348341198 Merge pull request #1869 in HDFFV/hdf5 from ~JSOUMAGNE/hdf5:topic_file_get_id to develop 
* commit '7f5a5020c8ec882e6b7eceab878470003e2a8b63':
  Fix H5F_get_file_id and H5F__get_file_id to take app_ref parameter
 2019-08-14 19:15:17 -05:00
Dana Robinson
c490fefbc3 Added public H5Sselect_adjust_u and H5Shyper_adjust_s calls. 2019-08-14 17:09:11 -07:00
Dana Robinson
bd8da502cf Some refactoring prior to implementing new H5P MPI functions. 
* Macro cleanup and obvious warning fixes in parallel code.
* Moved H5FD comm and info dup/free wrapper code to a new H5mpi.c file
  and separated it to deal with each MPI type separately.
 2019-08-14 16:22:06 -07:00
Jake Smith
396edbe6bf Merge pull request #1872 in HDFFV/hdf5 from ~JAKE.SMITH/hdf5:bugfix/ros3_hdfs_warns_squashed to develop 
* commit '2e5cd3d2b2d953420252c80ab5e32ac95ac0c5b3':
  Fix compiler warnings with diabled ROS3 and HDFS VFDs. Fix misuse of [HD]strncpy and [HD]snprintf. Minor formatting changes. Fix test cleanup issue with java groups example.
 2019-08-14 15:54:10 -05:00
Ray Lu
47e3d99f65 Merge pull request #1871 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:bugfix/directory_name_develop to develop 
* commit '0b868668bac0d268120844adb9ad216a9a8e1395':
  Changed the directory name left out from the previous commit.
  Changed the name of the temporary directory from 'tmp' to a special name to avoid possible conflicts.
 2019-08-14 15:49:57 -05:00
Jacob Smith
2e5cd3d2b2 Fix compiler warnings with diabled ROS3 and HDFS VFDs. 
Fix misuse of [HD]strncpy and [HD]snprintf.
Minor formatting changes.
Fix test cleanup issue with java groups example.
 2019-08-14 15:36:45 -05:00
Allen Byrne
05edbabbb5 Merge pull request #1866 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '2102be3259c14a1e4d94e8526894a16fd389f59d':
  HDFFV-10879 fix test varname
 2019-08-14 15:29:41 -05:00
Songyu Lu
0b868668ba Changed the directory name left out from the previous commit. 2019-08-14 15:22:06 -05:00
Songyu Lu
b234263bbf Changed the name of the temporary directory from 'tmp' to a special name to avoid possible conflicts. 2019-08-14 15:08:46 -05:00
Jerome Soumagne
7f5a5020c8 Fix H5F_get_file_id and H5F__get_file_id to take app_ref parameter 
Fix app_ref_count from being incremented when private routines are used
 2019-08-14 14:46:39 -05:00
Allen Byrne
2102be3259 HDFFV-10879 fix test varname 2019-08-14 13:50:25 -05:00
Vailin Choi
10bea9ac46 Fix for HDFFV-10813 H5Fset_metadata_read_retry_info() test fails on jelly with PGI/19. 2019-08-14 12:43:18 -05:00
Vailin Choi
674a945cc7 Merge pull request #16 in ~VCHOI/my_third_fork from develop to bugfix/HDFFV-10813-swmr-test-fails-on-jelly-with 
* commit '2b72832d97496290f74ccaffcda41c3e596f8f49':
  Added map API build status to libhdf5.settings.
 2019-08-14 11:25:16 -05:00
Dana Robinson
2b72832d97 Merge pull request #1863 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:map_api_merge to develop 
* commit '7555bc95d91aa99344cdc3a66d47eb44decad4ac':
  Added map API build status to libhdf5.settings.
 2019-08-14 09:35:55 -05:00
Dana Robinson
7555bc95d9 Added map API build status to libhdf5.settings. 2019-08-13 23:07:48 -07:00
Allen Byrne
a5d37a2419 Merge pull request #1862 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'e42120c308b619e58f412e167f4449fd003f8ca9':
  HDFFV-10879 set default API version
  Remove old code
  Correct error test spelling and use
 2019-08-13 13:27:35 -05:00
Allen Byrne
e42120c308 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'aeb145428f5e6bc51742fff031b0cf8cf6fbefbb':
  Updated h5trav.c to emit output that doesn't require ddl changes for map support.
  Fixed Map API CMake option
  Renamed H5Mdelete_key to H5Mdelete and H5Mset to H5Mput.
  Added ifdef for intel compilers, __GNUC__ has to be defined for header files which use it to work with intel compilers. This gives a warning for intel compiler about fallthrough, so added a check not to include fallthrough if using intel compilers.
  Added the map (H5M) API
 2019-08-13 13:15:55 -05:00
Dana Robinson
aeb145428f Merge pull request #1860 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:map_api_merge to develop 
* commit 'd95745235a468b17f697843adb3d0e54bd919893':
  Updated h5trav.c to emit output that doesn't require ddl changes for map support.
  Fixed Map API CMake option
  Renamed H5Mdelete_key to H5Mdelete and H5Mset to H5Mput.
  Added the map (H5M) API
 2019-08-13 12:57:19 -05:00
Dana Robinson
d95745235a Updated h5trav.c to emit output that doesn't require ddl changes for map 
support.
 2019-08-13 10:55:34 -07:00
Allen Byrne
7b8ffecc20 HDFFV-10879 set default API version 2019-08-13 11:04:13 -05:00
Dana Robinson
dd2133f56e Fixed Map API CMake option 2019-08-13 08:53:09 -07:00
Dana Robinson
5024051e35 Renamed H5Mdelete_key to H5Mdelete and H5Mset to H5Mput. 2019-08-13 08:46:56 -07:00
Scot Breitenfeld
60b62b10f1 Merge pull request #1861 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit 'df7ce9a5c933315af34dd402cfb2ca394003b56b':
  Added ifdef for intel compilers, __GNUC__ has to be defined for header files which use it to work with intel compilers. This gives a warning for intel compiler about fallthrough, so added a check not to include fallthrough if using intel compilers.
 2019-08-13 10:36:55 -05:00
Allen Byrne
ac4f82fcd4 Remove old code 2019-08-13 10:26:43 -05:00
Allen Byrne
a7281b117c Correct error test spelling and use 2019-08-13 10:25:05 -05:00
M. Scot Breitenfeld
df7ce9a5c9 Added ifdef for intel compilers, __GNUC__ has to be defined for header files which use it to work with intel compilers. This gives a warning for intel compiler about fallthrough, so added a check not to include fallthrough if using intel compilers. 2019-08-13 10:10:23 -05:00
Dana Robinson
5b6bd7c922 Added the map (H5M) API 2019-08-13 01:36:42 -07:00
Allen Byrne
e874070dbb Merge pull request #1856 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'c476f020769d8f78581ef399c59e3d4e6e202b2f':
  HDFFV-10879 fix reference file
  HDFFV-10879 correct API version set command
 2019-08-12 15:58:48 -05:00
Allen Byrne
c476f02076 HDFFV-10879 fix reference file 2019-08-12 15:38:15 -05:00
Allen Byrne
b28636464e HDFFV-10879 correct API version set command 2019-08-12 15:19:11 -05:00
Allen Byrne
3af5cce895 Merge pull request #1853 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit 'd172582ca9573d685a4c3a9a6399113014da4b21':
  Use a STRING option for API version
  Fix API version option
 2019-08-12 14:20:01 -05:00
Allen Byrne
d172582ca9 Use a STRING option for API version 2019-08-12 12:45:29 -05:00
Allen Byrne
2d6bb8b95c Fix API version option 2019-08-12 11:24:36 -05:00
Allen Byrne
e96815ebd8 Merge pull request #1844 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '07af403991ae8950d1f930f5a6db2c7124ae8f91':
  Add option to explicitly disable extra tests
 2019-08-09 11:00:47 -05:00
Scot Breitenfeld
318dfdaba1 Merge pull request #1847 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit 'c56509b490d6834340dedcd3120893028ccb6e8c':
  Added gcc conditional for __attribute__((fallthrough)), removes 34 warnings on theta (10% of warnings).
 2019-08-09 08:32:58 -05:00
Dana Robinson
6f4f4adaa2 Merge pull request #1848 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop 
* commit '4900f8823497c63e9f9464dcb6459ebdcbfdac8d':
  Fixed an issue with older version of gfortran.
 2019-08-08 23:02:07 -05:00
Dana Robinson
4900f88234 Fixed an issue with older version of gfortran. 2019-08-08 18:46:59 -07:00
M. Scot Breitenfeld
c56509b490 Added gcc conditional for __attribute__((fallthrough)), removes 34 warnings on theta (10% of warnings). 2019-08-08 16:29:57 -05:00
Allen Byrne
07af403991 Add option to explicitly disable extra tests 2019-08-07 15:18:30 -05:00
Larry Knox
0ce619b92d Merge pull request #1843 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop 
* commit 'c3c044cc003d6a4039635e638e1cd1c2487be177':
  Escape { and } in regex as required by sh in updated cori.nersc.gov. Tested change on jam, jelly, emu, ostrich and osx1011test.
 2019-08-07 14:55:45 -05:00
Allen Byrne
92d79a5840 Merge pull request #1839 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop 
* commit '83b23a5a42c2124c1c5933d0565be1bbefd1c30d':
  Use prefix variable
  Cleanup HD prefix
  Merge reconciliation and VFD test fixes
 2019-08-07 13:55:02 -05:00
Larry Knox
c3c044cc00 Escape { and } in regex as required by sh in updated cori.nersc.gov. 
Tested change on jam, jelly, emu, ostrich and osx1011test.
 2019-08-07 11:51:06 -05:00
Allen Byrne
83b23a5a42 Use prefix variable 2019-08-06 16:23:15 -05:00
Allen Byrne
9f12d83975 Cleanup HD prefix 2019-08-05 16:57:27 -05:00
Allen Byrne
1ef856f8b5 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit '5fe1216a4e6af8feef0551f7bece8a0e193310a9':
  Fix return type for H5Sselect_intersect_block().
  Updated H5TRACE macro.
  Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, along with tests and minor cleanups and refactorings.
 2019-08-05 06:44:11 -05:00
Quincey Koziol
5fe1216a4e Merge pull request #1819 in HDFFV/hdf5 from ~KOZIOL/hdf5:develop to develop 
* commit '905d40aa6f6eb603c5507e7967130760e3a2e43c':
  Fix return type for H5Sselect_intersect_block().
  Updated H5TRACE macro.
  Add H5Sselect_shape_same and H5Sselect_intersect_block API routines, along with tests and minor cleanups and refactorings.
 2019-08-04 18:38:36 -05:00