1751 Commits

Author SHA1 Message Date
Raymond Lu
8377804436 [svn-r14354] Bug fix for #956 where the element coordinates went wrong for dataspace selection. Added a test
for it, too.  This round of checkin isn't well tarnished yet.  I'll come back to work on Jan. 8. I'll revise it then. 

Tested it on kagiso, smirom, linew.
2007-12-20 16:09:58 -05:00
Quincey Koziol
6878261a43 [svn-r14353] Description:
- Add hash value for skip list string types, to reduce # of string
        comparisons.
    - Fixed bug with metadata/small data block aggregator adding size == 0
        block into file free space list.
    - Refactored metadata/small data block aggregator code into single set of
        common routines.
    - Changed block aggregator code to be smarter about releasing space in the
        'other' block when the 'other' block has aggregated enough data.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-12-20 15:36:08 -05:00
Elena Pourmal
98fb2db938 [svn-r14340] Maintenance for VMS system:
Skip one of the tests in flush2.c since it looks like VMS system
		flsuhes the file anyway (like on Winodws with DLLs)

		Renamed files family*.h5 that are used in backward compatibility
		testing to have only one '.' in a file name, otherwise VMS system
		becomes confused and test fails.

		Cleaned up the only test (Fortran multi-file test) that is failing on 
		VMS (C counterpart passesa).

		Added new script to facilitate the build process on VMS
		Updated MANIFEST

PLatforms tested: VMS server, kagiso and linew (minor changes)
2007-12-13 13:17:02 -05:00
Quincey Koziol
66addd2d2c [svn-r14334] Description:
- Avoid trying to update 1-D dataset's chunk indices (they can't change)
    - Cache a copy of a dataspace describing a chunk, when doing single
        element I/O
    - Keep a 'chunk info' struct around, for single element I/O
    - Avoid creating a skip list for chunk infos when performing I/O on single
        element

	Also, minor formatting cleanups to testing code

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-12-10 16:38:03 -05:00
Pedro Vicente Nunes
e7d0100948 [svn-r14333] fix typo in comment 2007-12-10 14:49:18 -05:00
Quincey Koziol
765f0159ff [svn-r14307] Description:
- Extracted common code from H5D_select_read/H5D_select_write into single
        routine (H5D_select_io) and made H5D_select_read/H5D_select_write
        "gateway" routines, passing I/O buffer to operate on in "op" struct.
    - Create optimized pathway in H5D_select_io for I/O operations on single
        elements.
    - Make "get linear offset of first element" callback for each type of
        selection (used in "optimized pathway", above)

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-29 13:44:07 -05:00
Elena Pourmal
a8261deceb [svn-r14288] Maintenance for beta5 release: vesrion number was changed to 1.8.0-beta5 by running
bin/h5vers script

Platforms tested: kagiso (minor change)
2007-11-26 12:09:46 -05:00
Quincey Koziol
afd94614e0 [svn-r14286] Description:
Add H5Ovisit() and H5Ovisit_by_name() API routines.


Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-25 17:10:35 -05:00
Quincey Koziol
e4f62217b8 [svn-r14285] Description:
Add H5Lvisit() API routine.

	Add explicit regression tests for H5Lvisit_by_name().

	Correct error with visiting links when links contain loop to group
already encountered.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-24 14:28:15 -05:00
Quincey Koziol
2f36ea99d4 [svn-r14284] Description:
Add H5Lvisit_by_name() API routine to library.

	Eliminated all (five!) other group traversal routines and changed them
all to use the new API routine.

	Cleaned up output of h5ls & h5stat:
		- Issue error when requesting recursive traversal of a file
			with the "group info" flag, but no group given
		- Print info about root group in all(?) appropriate situations
		- Don't print "verbose" information about root group until the
			root group is in the list of objects to display
	(mostly because h5ls & h5stat had a different twist on traversing the
groups in a file that the other utilities)

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-24 11:49:36 -05:00
Quincey Koziol
083357dad3 [svn-r14283] Description:
Open external link file with read-only access, to avoid permissions
issue in certain circumstances.

Tested on:
	FreeBSD/32 6.2 (duty) w/read-only testfile
2007-11-24 11:36:01 -05:00
Albert Cheng
a0c93eb2ed [svn-r14275] Removed all stream-vfd source code, both library and test.
Updated MANIFEST of the removal too.

Tested:
Kagiso and smirom.
2007-11-20 12:22:15 -05:00
Albert Cheng
b4f4670c81 [svn-r14270] Description:
Removed the stream-vfd from the basic library code.
(The stream-vfd source files are not removed yet but the MANIFEST has been
updated to NOT release those stream-vfd source files.)

Platforms tested:
Kagiso and smirom.
Then test the release tar ball in kagiso.
2007-11-19 22:43:58 -05:00
Raymond Lu
58049cceaa [svn-r14252] Minor change: the test for opening external link twice doesn't work with FAMILY driver.
Skip the test if it is.

Tested on kagiso.
2007-11-12 09:48:48 -05:00
Quincey Koziol
54d42e74c4 [svn-r14249] Description:
- Changed H5S_select_shape_same routine to handle scalar dataspace
        comparisons correctly.  (Added regression tests to verify)
    - Simplified chunk map creation, now that scalar dataspaces are handled
        in same way as "simple" dataspaces.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-10 16:07:53 -05:00
Raymond Lu
1dc74b6177 [svn-r14245] Minor change: the test for opening external link twice doesn't work with MULTI driver.
Skip the test if it is.
2007-11-09 14:57:00 -05:00
Raymond Lu
82f785ee0c [svn-r14242] Added some comments. No test is needed. 2007-11-07 10:38:45 -05:00
Raymond Lu
871694b3ac [svn-r14241] A minor change: Let the test of opening external link twice in external.c use
be_extlink2.h5, which is created with gen_udlinks.c.

Tested on kagiso.
2007-11-07 10:17:38 -05:00
Quincey Koziol
71d3a0006a [svn-r14239] Description:
Add new test file to manifest.

	Switch to using latest version of H5Gopen().

Tested on:
	FreeBSD/32 6.2 (duty)
2007-11-06 09:40:31 -05:00
Raymond Lu
f877f94c13 [svn-r14238] Bug fix: It's reported by the CGNS people. When an external link was opened twice, the library
had some trouble to close in the end.  The problem came from the field "holding_file" of 
H5O_loc_t.  It's used to indicate special links like external links.  The fix is to turn it off
whenever H5O_open is called.  Later the caller function should turn it on when it needs to.

Tested on kagiso, linew, and smirom.
2007-11-05 17:13:43 -05:00
Quincey Koziol
522e714273 [svn-r14234] Description:
Add H5Aexists and H5Aexists_by_name API routines, to match H5Lexists.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-01 17:19:04 -05:00
Quincey Koziol
1f3aede7c7 [svn-r14230] Description:
Add H5Ecreate_stack() API routine, to fill a minor gap in the error
routines.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-01 14:27:15 -05:00
Quincey Koziol
24f2310b12 [svn-r14229] Description:
Change H5O[gs]et_comment to H5O[gs]et_comment_by_name and re-add simpler
forms of H5O[gs]et_comment.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-01 13:24:08 -05:00
Quincey Koziol
ecaf22fa04 [svn-r14228] Description:
Change H5Llink to H5Olink, which makes more sense.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-11-01 12:32:49 -05:00
Quincey Koziol
e15bdb05e6 [svn-r14225] Description:
Change H5Oget_info -> H5Oget_info_by_name and re-add H5Oget_info in a
simpler form for querying a particular object, to align with other new API
routines.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-31 08:13:40 -05:00
Quincey Koziol
b969dce6e5 [svn-r14224] Description:
Change H5Literate -> H5Literate_by_name and add simpler form of
H5Literate, to bring this routine into alignment with the other new API
routines.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 17:56:15 -05:00
Quincey Koziol
c136b81140 [svn-r14223] Description:
Change existing H5Gget_info -> H5Gget_info_by_name and add new version
of H5Gget_info, with simpler parameters, to better match new API routines.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 16:57:50 -05:00
Quincey Koziol
f854744668 [svn-r14222] Description:
Change H5Adelete2 -> H5Adelete_by_name and un-deprecate H5Adelete1 back
to H5Adelete, for better consistency with new other API routiens.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 15:37:39 -05:00
Quincey Koziol
b8bb790649 [svn-r14220] Description:
Change H5Aiterate2 -> H5Aiterate_by_name to be more consistent with
other new API routine names

	Re-add H5Aiterate2, to operate on a particular object

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 14:52:05 -05:00
Quincey Koziol
8d71b4cbcd [svn-r14219] Description:
Change H5Arename2 -> H5Arename_by_name and un-deprecate H5Arename1 back
to H5Arename.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 14:03:28 -05:00
Quincey Koziol
0e06a92d0e [svn-r14218] Description:
Changed H5Acreate2 -> H5Acreate_by_name, to be more consistent with
other new API routines.

	Re-added simpler form of H5Acreate2, which creates attributes directly
on an object.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 13:13:48 -05:00
Quincey Koziol
dbff4af21c [svn-r14217] Description:
Change H5Aopen -> H5Aopen_by_name, in order to be more consistent with
other new API routines.

	Re-add H5Aopen as a simpler routine, to open attributes on a particular
object.  (Much like the old H5Aopen_name routine).

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 11:07:20 -05:00
Quincey Koziol
a5984f59f7 [svn-r14212] Description:
Make H5Tarray_create() and H5Tget_array_dims() versioned, and drop the
"perm" parameter from the '2' versions.

	Shift internal library usage to '2' versions.

	Add simple regression tests for '1' versions.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-18 17:02:19 -05:00
Quincey Koziol
cf56cd041d [svn-r14211] Description:
Remove --enable-hdfv1_6 configure flag, now that all dependencies on it
have been removed and new --with-default-api-version=[v16|v18] and
--disable-deprecated-symbols flags have taken its place.

	Update types in bin/trace so that bin/reconfigure runs cleanly.

	Run bin/reconfigure to regenerate configure script, along with
other associated files, etc.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-18 13:57:08 -05:00
Quincey Koziol
8d0b1acf68 [svn-r14210] Description:
Enable the backward compatibility file format test for the family VFD
in all situations.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-18 12:47:43 -05:00
Quincey Koziol
873c1d3181 [svn-r14209] Description:
Remove 1.6 compatibility ifdef's which were masking error from querying
for info on invalid filter.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-18 12:33:18 -05:00
Quincey Koziol
b0eb42058c [svn-r14208] Description:
Make H5Pget_filter_by_id() API versioned and switch internal usage
to H5Pget_filter_by_id2().

	Add simple regression test for H5Pget_filter_by_id1().

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-18 11:10:46 -05:00
Quincey Koziol
13c484162c [svn-r14206] Description:
Make H5Pget_filter API versioned and switch internal usage to
H5Pget_filter2.

	Add regression test for H5Pget_filter1.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-17 07:48:04 -05:00
Quincey Koziol
ca0b287d21 [svn-r14204] Description:
Move H5Pinsert() out of old "compat v1.6" section and into API
versioning, switching internal usage to H5Pinsert2().

	Add regression test for H5Pinsert1()

	Clean up some other minor warnings.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-11 20:29:45 -05:00
Quincey Koziol
e5413fa795 [svn-r14202] Description:
Move H5Pregister our of old "compat v1.6" section and add it to the
versioned symbols.

	Add simple regression test for H5Pregister1()

	Split H5P.c source file into H5P/H5Pint/H5Pdeprec files.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-11 16:09:42 -05:00
Quincey Koziol
d9e5ca72f3 [svn-r14199] Description:
Add H5Dcreate to API versioned routines, replacing internal usage with
H5Dcreate2

	Fix thread-safe error stack initialization for API versioned error
stack printing routines.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-11 11:24:11 -05:00
Quincey Koziol
16683943c6 [svn-r14193] Description:
Make H5Dopen versioned and change all internal usage to use H5Dopen2

	Add simple regression test for H5Dopen1

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-08 14:59:36 -05:00
Quincey Koziol
d3ee3988b6 [svn-r14192] Description:
Deprecate H5Dextend in favor of H5Dset_extent (without using API
versioning, due to changed behavior) and switch internal usage to H5Dset_extent

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-08 10:26:02 -05:00
Quincey Koziol
1de51c7bc1 [svn-r14187] Description:
Put H5Acreate() under API versioning, with all internal usage shifted
to H5Acreate2().

	Add regression tests for H5Acreate1().

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-04 17:19:07 -05:00
Quincey Koziol
bb3afd50c2 [svn-r14185] Description:
Move H5Aopen_name() routine to deprecated symbol section and replace
internal usage with H5Aopen().

	Add simple regression test for H5Aopen_name() to deprecated routine
test.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-04 14:29:58 -05:00
Quincey Koziol
3db40827da [svn-r14184] Description:
Move H5Aopen_idx() into deprecated symbols section, replacing all
internal usage with H5Aopen_by_idx().

	Add simple regression test for H5Aopen_idx().

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-04 13:32:47 -05:00
Quincey Koziol
d4eec753a1 [svn-r14183] Description:
Move H5Aget_num_attrs() into deprecated routines section, replacing all
internal usage with H5Oget_info().

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-04 12:36:17 -05:00
Quincey Koziol
59b51a2ea7 [svn-r14180] Description:
Make H5Aiterate() versioned and change all internal use to H5Aiterate2()
	
	Leave some regression tests that exercise H5Aiterate1()

	Fix attribute display in h5dump & h5ls to be "by name" by default

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-04 10:06:28 -05:00
Quincey Koziol
5b1a07823f [svn-r14163] Description:
Make H5Arename() versioned and switch internal usage to use H5Arename2()

	Add regression test for H5Arename1()


Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-27 18:09:59 -05:00
Quincey Koziol
c63f9b42ec [svn-r14162] Description:
Make H5Adelete versioned and switch internal library use to H5Adelete2.

	Add regression test for H5Adelete1

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        AIX/32 5.3 (copper) w/FORTRAN, w/parallel, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-09-27 17:42:20 -05:00