* commit 'dcc66a4f157ace0858b788228550f3e104df3242': (35 commits)
GGC requires attribute before function
Correct COMPILE defs usage
Add missing module_dir property
Text cleanup
Correct sentence punctuation.
Add release note.
Use set_property for MT flag
Correct command usage
Remove APPEND
Fix typo
Add missing test lib
add missing folder to path
Fix another command revert
Missed a command revert
Revert to old style for LINK_FLAGS gen expr not working
LINK_FLAGS must be separate property sets
Fix link flags syntax
Revert refactor link flags
refactor link flags to interface
Refactor link flags
...
* commit '02a9433fa0aac34ae81ab5f0d5b97a7934881215':
Add 2 parallel test files to CHECK-CLEANFILES so that if their tests fail before removing them, make check-clean will remove them.
Fixed memory leak Description: Added LinkCreatPropList to initH5cpp to cleaning up resource at exit. Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich)
HDFFV-10412 add note for new H5error_on Java API
* commit '9247388c3d14510341ea3f07847ce2cbb6e44a8e':
Rework new tests into one macro
Added a "won't fix" RELEASE.txt entry for HDFFV-10356.
Fix CMake test names
Fixed typo
Add release note for HDFFFV-10397.
Added a fix for HDFFV-10358.
Fixed documentation Description: - Updated the description of copy constructor for clarification. - Removed unnecessary comments. Platforms tested: Linux/64 (jelly)
Enhancement to the tool h5clear (HDFFV-10360)
Fix for HDFFV-10209 VDS SWMR test failure Free the object header when there are chksum retries.
Modified 43158f3bb3 and additional wrappers.
* commit 'b638bbd74b79f935a43aa6a804492e035ec315f6':
Code improvement Description: - Removed memory leaks caused by accidentally invoking p_get_member_type - Added the call to test_lcpl, missed previously Platforms tested: Linux/64 (jelly) Linux/ppc64 (ostrich) Darwin (osx1010test)
Updated RELEASE.txt Description: - Wrappers for H5Lcreate_soft, H5Lcreate_hard, H5Lcopy, H5Lmove, H5Ldelete, and H5Lget_info - Class LinkCreatPropList - Fixed typo in source file Platforms tested: Linux/64 (jelly)
Updated for H5LcreatProp.[h,cpp]
Updated MANIFEST for H5LcreatProp.[h,cpp]
HDFFV-10149 continued Description: - Moved the new wrappers committed on Mar 9: 43158f3bb3 to H5Location and renamed some of them for overloading. This is because the loc_id in the C APIs can be file, group, dataset, named datatype, and attribute. Previous implementation was wrong following some inaccurate C API reference manual.
Description:
- Moved the new wrappers committed on Mar 9:
43158f3bb3
to H5Location and renamed some of them for overloading.
This is because the loc_id in the C APIs can be file, group, dataset,
named datatype, and attribute. Previous implementation was wrong
following some inaccurate C API reference manual.
- Only the following wrappers are modified or added:
+ H5Lcreate_soft: changed name from newLink to link
// Creates a soft link from link_name to target_name.
void link(const char *target_name, const char *link_name,...)
void link(const H5std_string& target_name,...)
+ H5Lcreate_hard: changed name from newLink to link
// Creates a hard link from new_name to curr_name.
void link(const char *curr_name, const Group& new_loc,...)
void link(const H5std_string& curr_name, const Group& new_loc,...)
// Creates a hard link from new_name to curr_name in same location.
void link(const char *curr_name, const hid_t same_loc,...)
void link(const H5std_string& curr_name, const hid_t same_loc,...)
+ H5Ldelete: modified existing functions to add 2nd argument
// Removes the specified link from this location.
void unlink(const char *link_name,
const LinkAccPropList& lapl = LinkAccPropList::DEFAULT)
void unlink(const H5std_string& link_name,
const LinkAccPropList& lapl = LinkAccPropList::DEFAULT)
- copyLink and moveLink were only moved from Group to H5Location, no change
- Added class LinkCreatPropList
- Added overloaded functions H5Location::createGroup to take a link creation
property list
Group createGroup(const char* name, const LinkCreatPropList& lcpl)
Group createGroup(const H5std_string& name, const LinkCreatPropList& lcpl)
- Added wrapper for H5Lget_info() to H5Location
H5L_info_t getLinkInfo(const H5std_string& link_name,...)
Platforms tested:
Linux/64 (jelly)
Linux/ppc64 (ostrich)
Darwin (osx1010test)
Update for new support website.
* commit '801191b4c374adc462345f2c068f1cfc6f4adf97':
Upated cpp doc.
Added C++ wrappers - HDFFV-10149 Description: Added the following wrappers to class H5::Group: + H5Lcreate_soft: // Creates a soft link from link_name to target_name. void newLink(const char *target_name, const char *link_name,...) void newLink(const H5std_string& target_name,...)
Update for new support website Description: - Replaced external links with text including the C API name - Removed links of copyright at the bottom of each page - Removed logo at top - Removed document name and version number Platforms tested: Linux/32 2.6 (jam) - only documentation
Description:
Added the following wrappers to class H5::Group:
+ H5Lcreate_soft:
// Creates a soft link from link_name to target_name.
void newLink(const char *target_name, const char *link_name,...)
void newLink(const H5std_string& target_name,...)
+ H5Lcreate_hard:
// Creates a hard link from new_name to curr_name.
void newLink(const char *curr_name, const Group& new_loc,...)
void newLink(const H5std_string& curr_name, const Group& new_loc,...)
// Creates a hard link from new_name to curr_name in same location.
void newLink(const char *curr_name, const hid_t same_loc,...)
void newLink(const H5std_string& curr_name, const hid_t same_loc,...)
+ H5Lcopy:
// Copy an object from a group of file to another.
void copyLink(const char *src_name, const Group& dst,...)
void copyLink(const H5std_string& src_name, const Group& dst,...)
// Copy an object from a group of file to the same location.
void copyLink(const char *src_name, const char *dst_name,...)
void copyLink(const H5std_string& src_name,...)
+ H5Lmove:
// Rename an object in a group or file to a new location.
void moveLink(const char* src_name, const Group& dst,...)
void moveLink(const H5std_string& src_name, const Group& dst,...)
// Rename an object in a group or file to the same location.
void moveLink(const char* src_name, const char* dst_name,...)
void moveLink(const H5std_string& src_name,...)
Platforms tested:
Linux/64 (jelly)
Linux/ppc64 (ostrich)
Darwin (osx1010test)
* commit 'efa2a470c9d8cf2d584f6b22f5b80cd6687887d0': (36 commits)
Merge fix
HDFFV-9724 1_10 branch has a different number
HDFFV-9724 Merge vds prefix from develop
reverted changes from sync
Snapshot version 1.11 release 1
Fix valgrind issues
HDFFV-9724 init var to null
HDFFV-9724 add valgrind ENV
Fix memory leak due to addition of FORMAT check loop
HDFFV-9724 prefix of 0 length should be null value
HDFFV-9724 Corrected files and verified tests
Add library INTERFACE and MPI to tools
Increase maximum number of retries for h5watch tests.
Revert "Merge pull request #826 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop"
Fix library interface commands, add missing JNI
Add HD prefix
HDFFV-9724 Remove VDS file cache functionality
Removed incorrect MPI text
Par example needs to link with mpi libs
Because of MPI requirements in library ALWAYS add include path
...
Description:
- Replaced external links with text including the C API name
- Removed links of copyright at the bottom of each page
- Removed logo at top
- Removed document name and version number
Platforms tested:
Linux/32 2.6 (jam) - only documentation
Description:
- Replaced H5Location::exists with H5Location::nameExists and marked
H5Location::exists as deprecated.
- Miscellaneous test cleanup for consistency.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (jelly)
Darwin (osx1010test)
Description:
Added a single page html file, C2Cppfunction_map.mht, that shows
the current mapping of C APIs to C++ member functions. This page
can be reached from the main page of the C++ reference manual.
Description:
- Removed two inadvertently-added Group constructors in the header file.
There was no implementation.
- Removed deprecated H5Location and H5Object constructors that take an
existing ID.
- Miscellaneous improvements in comments, including updating URLs.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (jelly)
Darwin (osx1010test)
Description:
Put back H5Location::getNumObjs and marked as deprecated in favor of
Group::getNumObjs.
Platforms tested:
Linux/32 2.6 (jam)
Darwin (osx1010test)
Description:
Moved H5Location::getNumObjs to Group::getNumObjs (i.e., H5Gget_info)
Switched reinterpret_cast to static_cast in H5Object::iterateAttrs
Miscellaneous cleanup
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
* commit '0d05cb607e5951f3a28a101be56ca194022a7fa1':
Reverted addition of The HDF Group copyright headers to 3rd party CMake files for Java.
Add Copyright headers to 90 files (mostly .cmake files) without Copyright headers.
Add "Copyright by The HDF Group."" to copyright header.
and replace it with new url for COPYING file.
Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
Fixed typos and missing items in function headers, that were revealed
by Doxygen, and revised various comments.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
Fixed typos and missing items in function headers, that were revealed
by Doxygen, and revised various comments.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
Removed "#ifndef H5_NO_DEPRECATED_SYMBOLS" in file space tests,
because the wrappers only use the latest functions now.
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
Description:
Because H5Pset_file_space and H5Pget_file_space are deprecated, changed
to make wrappers for the new functions instead:
H5Ps/get_file_space_strategy
H5Ps/get_file_space_page_size
New wrappers in FileCreatPropList:
// Sets the strategy and the threshold value that the library will
// will employ in managing file space.
void setFileSpaceStrategy(H5F_fspace_strategy_t strategy, hbool_t persist, hsize_t threshold) const;
// Returns the strategy that the library uses in managing file space.
void getFileSpaceStrategy(H5F_fspace_strategy_t& strategy, hbool_t& persist, hsize_t& threshold) const;
// Sets the file space page size for paged aggregation.
void setFileSpacePagesize(hsize_t fsp_psize) const;
// Returns the threshold value that the library uses in tracking free
// space sections.
hsize_t getFileSpacePagesize() const;
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
Deprecating versions of PropList::setProperty that have arguments that
miss "const"
Platforms tested:
Linux/64 (jelly)
Linux/64 (platypus)
Darwin (osx1010test)
* commit '98090fe3b08a0ff85ae9bc93218a14017a6f37fe':
Purpose: Add new C++ wrappers Description: Added wrappers for H5Iis_valid, H5Ps/get_nlinks, H5Tget_create_plist, H5Oopen, H5Oclose and H5Pset_virtual
Description:
Added wrappers for H5Iis_valid, H5Ps/get_nlinks, H5Tget_create_plist,
H5Oopen, H5Oclose and H5Pset_virtual
// Checks if the given ID is valid.
static bool isValid(hid_t an_id);
// Sets the number of soft or user-defined links that can be
// traversed before a failure occurs.
void setNumLinks(size_t nlinks) const;
// Gets the number of soft or user-defined link traversals allowed
size_t getNumLinks() const;
// Returns a copy of the creation property list of a datatype.
PropList getCreatePlist() const;
// Opens an object within a group or a file, i.e., root group.
hid_t getObjId(const char* name,...);
hid_t getObjId(const H5std_string& name,...);
// Closes an object opened by getObjId().
void closeObjId(hid_t obj_id) const;
// Maps elements of a virtual dataset to elements of the source dataset.
void setVirtual(const DataSpace& vspace, const char *src_fname,...);
void setVirtual(const DataSpace& vspace, const H5std_string src_fname,...);
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (platypus)
Darwin (osx1010test)
Description:
Added wrappers for H5Fget_info2, H5Inmembers, and H5Itype_exists
// Gets general information about this file.
void getFileInfo(H5F_info2_t& file_info) const;
// Returns the number of members in a type.
static hsize_t getNumMembers(H5I_type_t type);
// Determines if an element type exists.
static bool typeExists(H5I_type_t type);
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (jelly)
Darwin (osx1010test)
Description:
Added wrappers for H5Pset_file_space and H5Pget_file_space
// Sets the strategy and the threshold value that the library will
// will employ in managing file space.
void setFileSpace(H5F_file_space_type_t strategy, hsize_t threshold) const;
// Returns the strategy that the library uses in managing file space.
H5F_file_space_type_t getFileSpaceStrategy() const;
// Returns the threshold value that the library uses in tracking free
// space sections.
hsize_t getFileSpaceThreshold() const;
Platforms tested:
Linux/32 2.6 (jam)
Linux/64 (jelly)
Darwin (osx1010test)
* commit 'bd85e57904f1f943774bb99ea5e8b0d074db0edb':
tools/test/h5diff/testh5diff.sh.in: Add code to delete copies of test .h5 files copied from tools/testfiles/vds to tools/test/h5diff/testfiles when running "make check" for an in-source build.
