Commit Graph

20960 Commits

Author SHA1 Message Date
Allen Byrne
0d701b9ff8 Move intel warnings to subfolder, update autotools files 2020-04-06 09:35:43 -05:00
Allen Byrne
d0a936ab62 Corrected note 2020-04-06 06:54:27 -05:00
Allen Byrne
2e85f81126 Remove overzealous additions 2020-04-05 16:38:25 -05:00
Allen Byrne
29ad4fcec9 Correct whitespace in flags, force list mode 2020-04-05 15:56:52 -05:00
Allen Byrne
2c2627e7f6 Flag construction must be after compiler detection 2020-04-05 13:38:04 -05:00
Allen Byrne
70495751c0 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '5d1590079ea0061a7b86d7210cb796b6d58a17c7':
  Skip testing of passthrough VOL connector in a Family File tools test
  Restore previous tools library driver name behavior with passthrough VOL connector
2020-04-05 11:06:35 -05:00
Allen Byrne
57f5d00a43 TRILAB-192 add c++ and fortran warnings build systems one file 2020-04-05 10:50:08 -05:00
Jordan Henderson
5d1590079e Merge pull request #2490 in HDFFV/hdf5 from tools_vol_update to develop
* commit 'a5a2fb44296327787476407a249d9470b3c80427':
  Skip testing of passthrough VOL connector in a Family File tools test
  Restore previous tools library driver name behavior with passthrough VOL connector
2020-04-03 15:06:08 -05:00
Jordan Henderson
a5a2fb4429 Skip testing of passthrough VOL connector in a Family File tools test 2020-04-03 14:29:10 -05:00
Allen Byrne
7a41367a13 Update release note for CMake warnings 2020-04-03 12:57:56 -05:00
Jordan Henderson
08e77ac6fa Restore previous tools library driver name behavior with passthrough VOL connector 2020-04-03 12:45:22 -05:00
Allen Byrne
b7227657f2 Add missing header include 2020-04-03 08:50:51 -05:00
Allen Byrne
96ea55b95d Merge pull request #2474 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '36b8060323f24341c8f4610108e8ccb955dbe192':
  Correct extra flags
  TRILAB-192 remove comment
  TRILAB-192 add comparable clang flags
2020-04-03 08:49:54 -05:00
Dana Robinson
85b3b9e670 Updated tools dump output when dataset offset is undefined. 2020-04-02 10:25:46 -07:00
Allen Byrne
36b8060323 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'ac099b0b6391fd149af4f4fcf8f79189dcc615bb':
  Fixed unnecessary H5R casts in the tools that were raising warnings.
2020-04-02 11:02:37 -05:00
Dana Robinson
ac099b0b63 Merge pull request #2485 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop
* commit '1c854737665f3f853a324c34292390ab57431fec':
  Fixed unnecessary H5R casts in the tools that were raising warnings.
2020-04-02 11:00:48 -05:00
Allen Byrne
7e06b76c64 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'bae05235a2d87acb0d6b3a2e1c32f3b6f48cf203':
  Changed default dataset shared struct to initialize hid_t IDs to H5I_INVALID_HID.
  A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails. This is triggered by the tests for revised references when the libver bounds setting does not allow version 4 datatype message to be created.  The test failure is abort core dumped. This is due to the datatype initialization fails before the datatype ID is registered. The datatype cleanup code should provide for the above situation. The code to fix the problem is the same as what is done in H5D__open_oid().
  Remove tongue-in-cheek credit for Rusty Shackleford and Dale Alvin Gribble.
  Follow HDF5 conventions.
2020-04-02 08:25:44 -05:00
Dana Robinson
1c85473766 Fixed unnecessary H5R casts in the tools that were raising warnings. 2020-04-02 03:57:05 -07:00
Dana Robinson
456308ff17 Added checks for native optional call support in some of the tools. 2020-04-02 02:12:19 -07:00
Dana Robinson
3cd1b46b9c Merge branch 'develop' into tools_vol_update 2020-04-01 23:27:08 -07:00
Vailin Choi
bae05235a2 Merge pull request #2461 in HDFFV/hdf5 from ~VCHOI/my_third_fork:bugfix/dtype_close_on_error to develop
* commit 'afdcac28b85d690eebc80ab568fa5266081baaaa':
  A fix in the cleaning up code for datatype when datatype initialization via H5D__init_type() fails. This is triggered by the tests for revised references when the libver bounds setting does not allow version 4 datatype message to be created.  The test failure is abort core dumped. This is due to the datatype initialization fails before the datatype ID is registered. The datatype cleanup code should provide for the above situation. The code to fix the problem is the same as what is done in H5D__open_oid().
2020-04-01 22:14:42 -05:00
Dana Robinson
281e8444d8 Merge pull request #2484 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop
* commit 'a267c4e5d37f00bf6cff942b57b5a13affaa8bd5':
  Changed default dataset shared struct to initialize hid_t IDs to H5I_INVALID_HID.
2020-04-01 21:11:51 -05:00
Dana Robinson
a267c4e5d3 Changed default dataset shared struct to initialize hid_t IDs to
H5I_INVALID_HID.
2020-04-01 18:46:07 -07:00
David Young
1547feed60 Merge pull request #2363 in HDFFV/hdf5 from ~DYOUNG/werror:thread_id to develop
* commit '63c95faf49559ea66e3066427961095b69fdb213':
  Remove tongue-in-cheek credit for Rusty Shackleford and Dale Alvin Gribble.
  Follow HDF5 conventions.
2020-04-01 15:27:51 -05:00
Allen Byrne
196193c18d Correct extra flags 2020-04-01 11:46:26 -05:00
Allen Byrne
abd38c0b85 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '2c494482eb986ce051463e96d12a661c494a9335':
  Minor renaming in the tools code.
2020-03-31 22:23:50 -05:00
vchoi
3f081c9937 Modifications based on PR review feedback. 2020-03-31 19:53:14 -05:00
Dana Robinson
2c494482eb Merge pull request #2483 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop
* commit 'b1533616f28996983ec505fff8f62edf3dd820b3':
  Minor renaming in the tools code.
2020-03-31 19:46:19 -05:00
Dana Robinson
b1533616f2 Minor renaming in the tools code. 2020-03-31 16:58:24 -07:00
Dana Robinson
816a12f04f Merge branch 'develop' into tools_vol_update 2020-03-31 03:43:03 -07:00
Allen Byrne
18db5749dc Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'a46f31c2eb436e946639bb32518ce279507fa368':
  Fix for HDFFV-11065.
2020-03-30 11:39:47 -05:00
Gerd Heber
a46f31c2eb Merge pull request #2479 in HDFFV/hdf5 from ~GHEBER/hdf5:bugfix/HDFFV-11065 to develop
* commit '2dfc047bc4aca7c13bccf44da97bff026cbbf5a6':
  Fix for HDFFV-11065.
2020-03-30 11:26:14 -05:00
Allen Byrne
076a981993 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'c20e268979ec623fb159501e382c6cc55a5d665e':
  Fix latent bug in h5repack options file reading Add 'enable-error-stack' option to h5format_convert
2020-03-30 07:23:00 -05:00
Dana Robinson
c36b707578 Merge branch 'tools_vol_update' of https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into tools_vol_update 2020-03-30 01:52:21 -07:00
Dana Robinson
36e8e2be4b Misc changes for h5dump VOL changes. 2020-03-30 01:51:36 -07:00
Jordan Henderson
c20e268979 Merge pull request #2478 in HDFFV/hdf5 from tools_vol_update to develop
* commit '9676029742f18aaae37dd48947bc1faf23406169':
  Fix latent bug in h5repack options file reading Add 'enable-error-stack' option to h5format_convert
2020-03-29 18:13:58 -05:00
Gerd Heber
2dfc047bc4 Fix for HDFFV-11065. 2020-03-29 16:04:58 -05:00
Jordan Henderson
9676029742 Fix latent bug in h5repack options file reading
Add 'enable-error-stack' option to h5format_convert
2020-03-29 12:37:14 -05:00
Allen Byrne
d2a75d211d TRILAB-192 remove comment 2020-03-29 07:51:35 -05:00
Allen Byrne
93a9b70a8f Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'e9e3e2f1d67ccf71cc5af711065d1f85761ab5b7':
  Refactor to reduce verbosity.
2020-03-29 07:47:01 -05:00
Quincey Koziol
e9e3e2f1d6 Merge pull request #2471 in HDFFV/hdf5 from alloc_stat_tests to develop
* commit '0eb562bc201a38f9b4a82e954bfc63daa6838d45':
  Refactor to reduce verbosity.
2020-03-28 15:48:55 -05:00
Allen Byrne
c6c9af20bf Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'f5cb547825e462c3299b6f41d03a71aa6faef950':
  Minor renaming in h5dump (addr --> token)
2020-03-28 09:35:25 -05:00
Dana Robinson
2a06f94377 Merge pull request #2476 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:tools_vol_update to tools_vol_update
* commit 'f5cb547825e462c3299b6f41d03a71aa6faef950': (29 commits)
  Minor renaming in h5dump (addr --> token)
  Correct macro check
  Add extensive warnings to tools executables
  Reorg comments
  Correct warning flag form
  Because of tools macro, this needs to be a warning
  unused set-variable in macro
  Fix Werror issues in JNI and tools
  TRILAB-192 fix JNI shadow warning
  TRILAB-192 restrict extensive warnings to libraries
  TRILAB-24 use CHECK_STRUCT_HAS_MEMBER
  TRILAB-192 add release note
  TRILAB-192 Identify warnings that fail as errors
  Correct failure when allocation tracking are disabled.
  Update the MANIFEST for the autoconf/cmake shared warnings files.
  Correct syntax
  Update CMake compiler flags to use same set of warnings
  Revise API for H5get_alloc_stats() to take a struct instead of separate values.
  Allow use of INTEL icl/icl++ for clang
  Move the GNU warnings configuration under config/gnu-warnings/ and trim the filename prefixes.  Update config/gnu-flags to suit.
  ...
2020-03-27 20:19:22 -05:00
Dana Robinson
f5cb547825 Merge pull request #2475 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop
* commit '2dd6075c7a13ba7cbaa922448df4bd5e72c1b5ab':
  Minor renaming in h5dump (addr --> token)
2020-03-27 19:23:58 -05:00
Dana Robinson
2dd6075c7a Minor renaming in h5dump (addr --> token) 2020-03-27 17:17:00 -07:00
Allen Byrne
0da53027d9 TRILAB-192 add comparable clang flags 2020-03-27 17:10:53 -05:00
Allen Byrne
c66ce89383 Merge pull request #2473 in HDFFV/hdf5 from tools_vol_update to develop
* commit 'feb0f521b16b79485c22c86a630a1d91cb680a61':
  Fix some missing symbols issues in tools library
2020-03-27 17:06:23 -05:00
Jordan Henderson
feb0f521b1 Fix some missing symbols issues in tools library 2020-03-27 16:54:05 -05:00
Allen Byrne
bf5ef12d50 Merge pull request #2470 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop
* commit '07a66822fb1350955150295fcd6d9f53d3b7ee15':
  TRILAB-24 use CHECK_STRUCT_HAS_MEMBER
2020-03-27 15:01:44 -05:00
Allen Byrne
07a66822fb Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'd5bbf3d4086d7fa0300325a08a608f1cc7b4ce33':
  A few small tweaks to the tools from review
  Replace usage of some standard library functions with HD- versions
  Update Tools library to be better compatible with VOL connectors
2020-03-27 14:10:05 -05:00