Changes since 19990611
----------------------
./doc/html/H5.format.html
Added documentation for opaque data types (bitfield types were
already documented but they were out of order).
./src/H5E.c
Fixed a bug with glibc2 on linux systems where `stdout' is an
extern and can't be used to initialize static data.
./src/H5T.c
./src/H5Tpkg.h
./src/H5Tpublic.h
./src/H5detect.c
Removed the `_T' from the new C9x types I just added so the
names are consistent with existing types. Besides, the fact
that something is a datatype is obvious because it starts with
H5T_NATIVE_.
./tools/h5ls.c
Added the new C9x data types. H5ls prints one of these types
only if it doesn't match one of the builtin C types.
Prints the OID for shared data types.
Fixed a formatting bug with symbolic links which was
introduced a few changes ago.
The commandline has been changed so that objects from multiple
files can be listed with a single command. Instead of
specifying a file name and an optional list of objects, each
thing to print is a file name and object concatenated. H5ls
figures out how to devide the name into a file name and object
name even when the file name part doesn't correspond to an
actual Unix file.
Old syntax: h5ls [OPTIONS] FILE [OBJECTS]
New syntax: h5ls [OPTIONS] FILE[/OBJECT] [FILE[/OBJECT]]...
Example ({X,Y} is expanded by the shell)
Old command: h5ls -d ../test/x.data dir1 dir2
New command: h5ls -d ../test/x.data/{dir1,dir2}
The filename is printed as part of the object name when full
names are requested (--full or --recursive). If people really
don't like this they can undefine a constant at the top of
h5ls.
Errors from the hdf5 library are turned off.
Commandline switches of the form `--width 80' are accepted in
addition to `--width=80'. This is more symmetric with
single-letter switches that take two forms: `-w 80' and
`-w80'.
./src/H5D.c
Added tracing instrumentation for H5Dvlen_reclaim().
./src/H5private.h
Added casts to int for the isalpha() et al macros to shut up
solaris warnings about char subscripts.
----------------------
./doc/html/H5.format.html
Added documentation for opaque data types (bitfield types were
already documented but they were out of order).
./src/H5E.c
Fixed a bug with glibc2 on linux systems where `stdout' is an
extern and can't be used to initialize static data.
./src/H5T.c
./src/H5Tpkg.h
./src/H5Tpublic.h
./src/H5detect.c
Removed the `_T' from the new C9x types I just added so the
names are consistent with existing types. Besides, the fact
that something is a datatype is obvious because it starts with
H5T_NATIVE_.
./tools/h5ls.c
Added the new C9x data types. H5ls prints one of these types
only if it doesn't match one of the builtin C types.
Prints the OID for shared data types.
Fixed a formatting bug with symbolic links which was
introduced a few changes ago.
The commandline has been changed so that objects from multiple
files can be listed with a single command. Instead of
specifying a file name and an optional list of objects, each
thing to print is a file name and object concatenated. H5ls
figures out how to devide the name into a file name and object
name even when the file name part doesn't correspond to an
actual Unix file.
Old syntax: h5ls [OPTIONS] FILE [OBJECTS]
New syntax: h5ls [OPTIONS] FILE[/OBJECT] [FILE[/OBJECT]]...
Example ({X,Y} is expanded by the shell)
Old command: h5ls -d ../test/x.data dir1 dir2
New command: h5ls -d ../test/x.data/{dir1,dir2}
The filename is printed as part of the object name when full
names are requested (--full or --recursive). If people really
don't like this they can undefine a constant at the top of
h5ls.
Errors from the hdf5 library are turned off.
Commandline switches of the form `--width 80' are accepted in
addition to `--width=80'. This is more symmetric with
single-letter switches that take two forms: `-w 80' and
`-w80'.
./src/H5D.c
Added tracing instrumentation for H5Dvlen_reclaim().
./src/H5private.h
Added casts to int for the isalpha() et al macros to shut up
solaris warnings about char subscripts.
the generanted hdf files against saved output of hdp. This did not
work well because whenever the hdp changes its output format, the
tests failed unnecessarily. The tests also failed if the test machine
uses a different version of HDF library from the HDF5 development
machine.
Changed the algorithm to compare the generated HDF files against
saved HDF files (first by a simple cmp; if that fails, compare the
output of the host machine's hdp on both HDF files.)
Saved HDF files are stored in testfiles/Expected.
Tested on Hawkwind (FreeBSD) with srcdir option and Baldric (Solaris)
without srcdir option.
the generanted hdf files against saved output of hdp. This did not
work well because whenever the hdp changes its output format, the
tests failed unnecessarily. The tests also failed if the test machine
uses a different version of HDF library from the HDF5 development
machine.
Changed the algorithm to compare the generated HDF files against
saved HDF files (first by a simple cmp; if that fails, compare the
output of the host machine's hdp on both HDF files.)
Tested on Hawkwind (FreeBSD) with srcdir option and Baldric (Solaris)
without srcdir option.
----------------------
./configure.in
./configure [REGENERATED]
./src/H5T.c
./src/H5Tpkg.h
./src/H5Tpublic.h
./src/H5config.h.in [REGENERATED]
./src/H5detect.c
./src/H5private.h
Added checks for the C9x integer types like int32_t,
int_least32_t, and int_fast32_t and the unsigned
versions. HDF5 defines H5T_NATIVE_* versions (all caps) to be
the same as the type provided by the C library, otherwise it
defines them as integers exactly the specified size. Hardware
type conversion functions are used when the types
match some C-language type (like `int').
while-loop. Prepare it for the next revision in which the hdp
will apply to both the converted hdf4 file and a preserved hdf4
file, then compare the hdp output from both for h5toh4 converter
correctness.
separated the dumping of the attributes and datasets. works on nt but
on unix(baldric) adds an extra line that says cannot print data.
this is just a temporary checkin until i can figure out what is wrong
----------------------
./configure.in
./configure [REGENERATED]
./src/libhdf5.settings.in [NEW]
./config/conclude.in
./INSTALL
./MANIFEST
A file called `libhdf5.settings' is installed along with the
libraries and it contains a list of various things that might
be of interest to someone using the library (such as what
compiler/options were used and what other libraries might need
to be linked to satisfy external references). We can add more
things as it becomes necessary. Here's a sample...
SUMMARY OF THE HDF5 CONFIGURATION
=================================
HDF5 Version: hdf5-1.1.106
Configured on: Tue Jun 8 11:38:52 EDT 1999
Configured by: matzke@llnl.gov at Spizella Software
Configure mode: development
Host system: i686-pc-linux-gnulibc1
Byte sex: little-endian
Libraries: static, shared
Parallel support: mpicc
Installation point: /usr/local
Compiler: mpicc (egcs-2.91.66)
Compiler switches: -Wall -g
Extra libraries: -lmfhdf -ldf -lz -ljpeg -lm
Archiver: ar
Ranlib: ranlib
Debugged Packages: d,e,f,g,hg,i,mm,o,p,s,v,z
API Tracing: yes
File addresses: large
----------------------
./tools/h5ls.c
./tools/h5tools.c
Added support for printing bitfields and opaque data.
./test/dsets.c
Added bitfield and opaque datasets to the output file so h5ls
has something interesting to print.
./test/trefer.c
Resync'd
./src/H5Tconv.c
Fixed bitfield conversion which resulted in possible garbage
in high-order bits of destination when the destination type is
larger than the source type. Thanks for spotting it, Quincey.
----------------------
./tools/h5tools.c
Finished code which prints references (object and dataset
region). Patrick, if you tell me how h5dump should (or might
want to) print references I can make some changes to support
various formats...
You can try it out with:
cd test
env HDF5_NOCLEANUP=yes ./testhdf5
../tools/h5ls -dvr trefer1.h5
../tools/h5ls -dvr trefer2.h5
(run h5ls with no arguments if you forgot what the switches do)
./test/trefer.c
Call calloc instead of malloc in one place to prevent
uninitialized data from being written into the file.
----------------------
./tools/h5ls.c
./tools/h5tools.c
./tools/h5tools.h
Finished the `-x' or `--hexdump' switch, which causes all data
to be printed in hexadecimal format with no translation from
file to memory data type.
----------------------
./doc/html/Datatypes.html
./test/dtypes.c
Added documentation and tests for opaque types.
./tools/h5ls.c
Added a `-x' or `--hexdump' argument which is not fully
implemented (because I want to synchronize h5tools.c first)
but which will eventually print raw data in hexadecimal format
without any translation from disk. This would be useful for
debugging references and VL types.
./tools/h5tools.c
Added support for references (not quite finished yet, but
compiles -- I wanted to sync up this file before Patrick and I
got too far apart...)
./src/H5R.c
Checked for error return value from H5R_get_object_type()
./src/H5A.c
./src/H5D.c
Changed error return values from NULL to FAIL
./test/Makefile.in
./test/trefer.c
Creates trefer1.h5 and trefer2.h5 so that the second test
doesn't clobber the first file since the files might be useful
for debugging.
accessed with H5Tvlen_create, but I need to start writing tests now. Also the
more esoteric API calls (such as H5Tget_vlen_buf_size and the memory management
calls) aren't implemented yet.
added the programtype variable and modified certain functions so they would use
this variable. started combinin h5dump_simple and h5dump_simple_dset into 1 function.
added an extra parameter to the h5dump_simple_dset function that because the
h5dump_simple function uses a var that isn't present in the dump_simple_dset
added a new variable to the tools lib that keeps track of what program is using
the library. h5ls.c and h5dump.c needed to init the variable to the correct
value for the programtype variable. this variable will hopefully only be temporary
until the lib gets combined farther
