Commit Graph

616 Commits

Author SHA1 Message Date
Larry Knox
3be0fbd817 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop 2019-01-05 07:50:15 -06:00
Larry Knox
25fe692c5c Configure build directory in batch scripts. 2019-01-05 07:49:19 -06:00
Larry Knox
cceb9f06b8 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '0e34f0feaaeb6d2286f87f695f25fae45c070a42': (26 commits)
  HDFFV-10664 update reference file
  HDFFV-10664 update reference files
  HDFFV-10664 add missing function and check for restriction
  Remove "bad" statements at end of TEST_ERROR.     Formerly arguments to FAIL_PUTS_ERROR
  Add RELEASE.txt entry for HDFFV-10596.
  Add semicolon at end of TEST_ERROR() invocation for consistency.
  Uninstall should remove the libhdf5_hl_fortran links.
  Add symlinks named libhdf5_hl_fortran* to libhdf5hl_fortran in Makefile.am to match cmake install and the name pattern for other hl lib files.
  Change FAIL_PUTS_ERROR to TEST_ERROR.
  Cleaned up the parallel flush test and set t_pflush1 to always fail. Also set CMake to handle this.
  Update calls: H5Dcreate to H5Dcreate2, H5Acreate to H5Acreate2.
  Removed a comment.
  Fix comment
  Align H5Lcreate_ud behavior with documentation for NULL udata pointer
  Update toolchain comment
  Use c99 standard cmake variable
  Add PGI toolchain
  Correction based on code review.
  HDFFV-10664 add check for state before set call
  HDFFV-10546 refactor variable name
  ...
2019-01-05 07:41:12 -06:00
Allen Byrne
6f6d0921c0 Use c99 standard cmake variable 2019-01-02 17:07:37 -06:00
Allen Byrne
f3636c573f HDFFV-10546 refactor variable name 2019-01-02 11:27:55 -06:00
Larry Knox
f9736d817e Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'af21ce90d9465e805807f17da21f93e64e03492a': (46 commits)
  Changed to Unix line endings and chmod -x.
  Fix runtest case for data to stdout in tool
  Updated the parallel install docs.
  Eliminated the need for a separate script variable.
  Flipped swapped testing strings.
  Specify variable type. Remove unnecessary whitespace.
  Added test_vol_plugin.sh to the list of scripts to clean
  Fixed a CMake build issue (CMake still doesn't run the VOL plugin tests)
  Added more sub-tests to the VOL plugin test.
  Added a simple test for registration of VOL connector plugins. Autotools only for right now, but this will be fleshed out in future work.
  OHDR tests now accept h5_fileaccess() fapls. Formatting, informative comments, and minor renaming.
  Fix some CMake listings
  Add error checking to the minimized dset header size calculation. Update printf->HDprintf statements.
  Remove `#if 0` block of deprecated code.
  Fix mistake with H5E_BEGIN_TRY {...} H5E_END_TRY block containing ERROR-raising macros. Formatting tweaks.
  Added a helpful message to the flush script.
  Added a shell script so we can run the parallel flush test on OpenMPI.
  Add "compact" storage test to relative header size comparisons.
  Formatting adjustments.
  Formatting adjustments
  ...
2019-01-02 10:07:31 -06:00
Dana Robinson
1f644fe7cd Changed to Unix line endings and chmod -x. 2019-01-01 14:30:26 -08:00
Larry Knox
126d1e6176 Add .lsf batch scripts and insert the build directory into the scripts
during configuration.
2018-12-28 16:50:48 -06:00
Dana Robinson
552fec96e9 Merge branch 'develop' into md_cache_logging_squash 2018-12-27 22:22:24 -08:00
Dana Robinson
18e6ec82d0 Squash merge of MDC logging changes. 2018-12-20 20:41:42 -08:00
Allen Byrne
7e8923957f HDFFV-10656 Add CHECK_VOL support to CMake 2018-12-20 15:11:27 -06:00
Allen Byrne
eb1b3f42c4 HDFFV=10632 test cleanup 2018-12-06 07:54:19 -06:00
Allen Byrne
e3e24a2989 HDFFV-10632 - split stderr and stdout in cmake 2018-12-03 09:35:59 -06:00
Larry Knox
7bf6e98bd9 Move wait_H5init.cmake up to config/cmake. 2018-11-20 12:09:14 -06:00
Larry Knox
8544aae3e8 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into develop 2018-11-20 11:58:27 -06:00
Larry Knox
720bbdfe61 Changes to CMake code to pause cmake/ctest, waiting for batch jobs to
run and finish.
2018-11-20 11:03:58 -06:00
Allen Byrne
3dc4055aaf Fix typo 2018-11-19 11:41:11 -06:00
Allen Byrne
4bc283a0f2 Standardize script 2018-11-19 11:03:42 -06:00
Allen Byrne
d9fbacff90 add max count to options file 2018-11-19 11:02:20 -06:00
Allen Byrne
a26aedce04 Check PARALLEL_LEVEL maximum 2018-11-19 10:03:18 -06:00
Larry Knox
38f7e3c86b Really don't run parallel tests without option specifying script. 2018-11-14 11:35:36 -06:00
Larry Knox
6cbd463d41 Add script and changes to wait for H5Tinit.c
Add more sample batch scripts, specifically for sbatch, not for knl
cross compile.
Don't run parallel tests when no parallel test script is configured in
HDF5options.cmake.
2018-11-14 11:19:28 -06:00
Allen Byrne
e753904d0b Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'e6545faa5699aae4d5dca23ed40e3080fa9dc72d':
  Update HDF5-Examples version to be included in CMake-* tar/zip files.
  Snapshot version 1.11 release 3.
2018-11-05 16:57:51 -06:00
hdftest
db48399bd8 Snapshot version 1.11 release 3. 2018-11-05 12:21:13 -06:00
Allen Byrne
ae0f4a23c0 Fix typo in whitespace area 2018-10-29 15:52:39 -05:00
Allen Byrne
096279caf7 HDFFV-10608 Move toolchain files into a subfolder 2018-10-22 16:08:52 -05:00
Allen Byrne
164bae2439 TRILAB-36 add option for test script batch command 2018-10-22 15:39:03 -05:00
Allen Byrne
42c8dd66d7 Correct quote char 2018-10-11 14:34:34 -05:00
Dana Robinson
e962df1591 VOL FEATURE 2018-10-10 08:10:15 -07:00
Allen Byrne
299852b6b5 Update examples version 2018-10-04 16:59:22 -05:00
Allen Byrne
4442b5b743 TRILABS-34 improve cross compile with emulator 2018-10-04 16:06:31 -05:00
Allen Byrne
a5301ee6b8 TRILABS-34 Cleanup try_run 2018-10-04 15:34:29 -05:00
Allen Byrne
9c39016e1d TRILABS-34 avoid try-run output capture 2018-10-04 14:00:49 -05:00
Allen Byrne
2a95ab5acb TRILABS-21 add toolchain related info and files 2018-10-04 11:40:33 -05:00
Allen Byrne
284cb8ffc0 TRILABS-21 Add intel compiler support 2018-10-04 10:42:44 -05:00
Allen Byrne
3209d1278f TRILAB-21 Intel flags 2018-10-02 18:13:21 -05:00
hdftest
e2f6e6f62f Snapshot version 1.11 release 2. 2018-09-20 14:54:10 -05:00
Allen Byrne
1d2beee51f HDFFV-10569 Add unsupported option notes to docs 2018-09-04 11:43:15 -05:00
Allen Byrne
0483f47192 Use project vars 2018-08-22 14:10:38 -05:00
Allen Byrne
9d1dae5daf Fix for packaging prefix in examples 2018-08-22 12:13:53 -05:00
Allen Byrne
732aae11c5 HDFFV-10547 develop needs 1.12 default option 2018-08-20 15:07:19 -05:00
Allen Byrne
b33fdb17c3 HDFFV-10547 requires updated examples version 2018-08-20 11:25:09 -05:00
Allen Byrne
ae7da889ec HDFFV-10552 Add missing HDF5_USE_110[2]_API_DEFAULT option 2018-08-17 14:48:43 -05:00
Allen Byrne
454b04176a Update cmake warnings to match the autotools files better 2018-08-16 15:45:31 -05:00
Jordan Henderson
70de0b18e3 Merge pull request #1167 in HDFFV/hdf5 from ~JHENDERSON/hdf5:bugfix/MPI2_only_fixes to develop
* commit '9aa2eaeb9ed9c94f63973cb55f13de256558497c':
  Add Autotools and CMake checks for big I/O MPI-3 functions
  Add hdf5settings section for parallel compression status in CMake builds
  Switch to CheckSymbolExists in CMake
  Add configure check for MPI_Mprobe and MPI_Imrecv functions
2018-08-02 09:25:00 -05:00
Jordan Henderson
9aa2eaeb9e Add Autotools and CMake checks for big I/O MPI-3 functions 2018-07-31 13:42:19 -05:00
Jordan Henderson
5e138dc1e9 Add hdf5settings section for parallel compression status in CMake builds 2018-07-31 10:45:43 -05:00
Allen Byrne
496372dc18 HDFFV-10508 more config fixes 2018-07-30 17:10:00 -05:00
Allen Byrne
323635f2b5 HDFFV-10508 correct sizeof 2018-07-30 16:31:39 -05:00
Allen Byrne
63fa8acbac Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'b6d1e9abdc2571f6d7b56ebab26a245d2f036516':
  Fixed typo in H5_H5CONFIG_F_IKIND name
2018-07-30 16:30:51 -05:00