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3a7b11863a
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Author SHA1 Message Date
Raymond Lu
3a7b11863a [svn-r23152] I took out the obsolete function H5PSIwrite_chunk and its related test and performance test. 
Tested on koala.
 2013-01-11 16:34:31 -05:00
Raymond Lu
7b895e1dd8 [svn-r23149] I put more condition checks with macro when DEFLATE filter is disabled. 
Tested on koala.
 2013-01-10 11:04:09 -05:00
Raymond Lu
8eab66f667 [svn-r23148] I added the macro condition check for the test of direct chunk write as it uses compress2 function. 
Tested on koala.
 2013-01-09 16:07:27 -05:00
Raymond Lu
81bcd314a9 [svn-r23147] ported revisions 23081:23145 from the trunk 2013-01-09 15:23:07 -05:00
Raymond Lu
cde5029461 [svn-r23146] The test on Windows shows it doesn't have zlib.h. I added a macro condition to verify it before include it. 
Tested on koala.
 2013-01-09 14:23:18 -05:00
Raymond Lu
cf823b47ed [svn-r23103] I changed the H5Dopen in hl/test/dectris_hl_perf.c and perform/dectris_perf.c to H5Dopen2. 
Tested on Koala.
 2012-12-14 10:42:18 -05:00
Raymond Lu
6050e78143 [svn-r23097] I changed H5Dopen to H5Dopen2 in test/dectris_tst.c and hl/test/test_dset_opt.c. I added 
hl/test/dectris_hl_perf.c
    perform/dectris_perf.c
    test/dectris_tst.c

Tested on koala.
 2012-12-13 11:13:43 -05:00
Raymond Lu
fc9ed51a3a [svn-r23087] I updated MANIFEST to include the new files hl/src/H5DO.c, H5DOpublic.h, H5DOprivate.h. I included H5DOpublic.h into hl/src/hdf5_hl.h. 
Tested on koala.
 2012-12-10 14:08:30 -05:00
Raymond Lu
c409265f9d [svn-r23082] I corrected an error for test_dectris.h5. 
Tested on jam.
 2012-12-06 14:48:50 -05:00
Raymond Lu
b7e1b629e9 [svn-r23081] ported revisions 22987 to 23080 from the trunk 2012-12-06 11:02:01 -05:00
Raymond Lu
6b1ef6ad02 [svn-r23079] I updated CMakefile for adding H5DO.c and H5DOpublic.h under hl/ directory. 
Not test.
 2012-12-05 16:11:49 -05:00
Raymond Lu
8f3a8710ca [svn-r23078] I took out O_SYNC flag from the code. I used it to do performance test. But 
we decided not to support it.

Tested on koala.
 2012-12-05 15:15:54 -05:00
Raymond Lu
bbeea7dd99 [svn-r23077] I adjusted the dataset and chunk to smaller sizes. 
Tested on koala.
 2012-12-05 11:57:30 -05:00
Raymond Lu
0c4cec81b2 [svn-r23075] I revised the code and test according to Quincey's review. I also added more test cases. 
Tested on koala.
 2012-12-04 14:47:35 -05:00
Raymond Lu
6192c80307 [svn-r23019] I added dectris_hl_perf.c for testing performance. 
Tested on koala.
 2012-11-07 16:59:43 -05:00
Raymond Lu
e9a9c23a6d [svn-r23018] I forgot to add these new files in previous commit. 2012-11-07 12:11:22 -05:00
Raymond Lu
b7041a91cd [svn-r23017] I added a prototype function H5DOwrite_chunk in HL library for Dectris people to test performance. The library's API function H5PSIdirect_write 
is still in.  I reorganized the internal library by adding H5D__pre_write function.

Tested on koala.
 2012-11-07 12:08:46 -05:00
Raymond Lu
0cf58a4755 [svn-r22987] ported revisions from 22742 to 22986 from the trunk 2012-10-29 13:59:05 -05:00
Raymond Lu
78b07da7ae [svn-r22742] ported revisions 22738 to 22741 from the trunk 2012-09-06 11:10:52 -05:00
Raymond Lu
9ce6dadd48 [svn-r22739] ported revisions 22615 to 22737 from the trunk 2012-09-05 13:13:15 -05:00
Scot Breitenfeld
1c9e159ffe [svn-r22737] Fix for HDF5 HDFFV-8109 H5S_UNLIMITED_F has a wrong type 
Tested: jam (gnu)
 2012-09-04 22:46:58 -05:00
Scot Breitenfeld
7740e853f4 [svn-r22736] Fix for HDFFV-8132: Compile problem w/NAG Fortran due to too many continuation lines. 
Tested: jam (gnu)
 2012-09-04 19:59:46 -05:00
Jonathan Kim
0aa8d4d88a [svn-r22735] Purpose: 
HDFFV-8143 Provide a routine(s) for telling the user why the library broke collective data access

Description:
    Added H5Pget_mpio_no_collective_cause() function that retrive reasons why the collective I/O was broken during Read/Write IO access.
    Reasons to break collective I/O:
     - SET_INDEPENDENT
     - DATATYPE_CONVERSION
     - DATA_TRANSFORMS
     - MPIPOSIX
     - NOT_SIMPLE_OR_SCALAR_DATASPACES  (NULL Space)
     - POINT_SELECTIONS
     - NOT_CONTIGUOUS_OR_CHUNKED_DATASET  (Compact or External-Storage)
     - FILTERS  

Tested: 
    jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE)
 2012-09-04 12:00:38 -05:00
HDF Tester
3ab17f5e04 [svn-r22732] Snapshot version 1.9 release 127 2012-09-02 09:34:02 -05:00
Raymond Lu
60daa9be2b [svn-r22728] I forgot to include H5MMprivate.h header file for using H5MM_free function. 
Tested on koala.
 2012-08-30 11:00:31 -05:00
Allen Byrne
3c69283e0b [svn-r22726] remove duplicate file line 2012-08-30 09:49:48 -05:00
Allen Byrne
6ce1aa0ffe [svn-r22725] Add other h5 files needed by pbits tests 2012-08-30 09:48:31 -05:00
Allen Byrne
1673b04a23 [svn-r22722] Update all references from configure.in to configure.ac 
Tested: h5committest
 2012-08-28 12:47:52 -05:00
Allen Byrne
b257bab294 [svn-r22720] Fix RelWithDebInfo packaging 2012-08-28 12:39:30 -05:00
Allen Byrne
1fa894c6b9 [svn-r22718] Remove unneeded srcdir test 2012-08-27 13:51:48 -05:00
Allen Byrne
7089b2cff0 [svn-r22716] HDFFV-8133: Add usage text to see Reference manual for compact subsetting. 2012-08-27 10:56:23 -05:00
Allen Byrne
5d88bae6df [svn-r22714] one more missed VAR change for parallel examples 2012-08-26 14:10:01 -05:00
Allen Byrne
f4a7d2cba2 [svn-r22712] Updated a missed example makefile. Tested locally with make installcheck (another h5committest understanding oversight) 2012-08-24 08:50:00 -05:00
Allen Byrne
caa51543a8 [svn-r22710] Remove reference to srcdir in TOOL path 2012-08-23 11:56:02 -05:00
Allen Byrne
1f8fb63581 [svn-r22709] HDFFV-8129: reconfigured on jam, Remove overloading of autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files. 
Tested: h5committest
 2012-08-23 11:07:43 -05:00
Quincey Koziol
cac6687a6a [svn-r22707] Description: 
Bring back some more cleanups from the plist_encode_decode branch, clean up
some formatting and compiler errors, and add a few more property comparison
routines that we've skipped implementing in the past.

Tested on:
    Mac OSX/64 10.7.4 (amazon) w/debug
    (Too minor to require h5committest)
 2012-08-22 14:09:56 -05:00
Larry Knox
edf83e5d1f [svn-r22706] Updated autotools: autoconf 2.69, automake 1.12.3, m4 1.4.16, libtool 2.4.2 
Tested THG machines.
 2012-08-22 00:00:32 -05:00
Dana Robinson
e53af0ed74 [svn-r22703] Description: 
Propagated Windows and POSIX correctness changes from SEC2 VFD to
    the MPI-POSIX VFD.  Fixes HDFFV-8058.

Tested on:
    jam w/ parallel and fortran enabled
 2012-08-21 06:47:54 -05:00
Dana Robinson
d8f67a62cc [svn-r22700] Description: 
Minor refactoring to extract managed object length determination.
    This makes the tiny, managed, and huge code work alike.

Tested on:
    jam (very minor change, no need for full commit test)
 2012-08-20 13:44:14 -05:00
HDF Tester
1560a6ea38 [svn-r22697] Snapshot version 1.9 release 126 2012-08-19 09:35:47 -05:00
Dana Robinson
3f6b6fbe93 [svn-r22694] Description: 
Minor change to consolidate odd bitmasking due to an old bugfix.

Tested on:
    jam (very minor change)
 2012-08-17 16:54:21 -05:00
Allen Byrne
60dc75f4f4 [svn-r22693] Add missing H5Tclose(). 2012-08-17 13:36:45 -05:00
Jonathan Kim
bb11cbee94 [svn-r22691] Purpose: 
HDFFV-7942 - h5diff: incorrect result for comparing attribute data with different type size in same class

Description:
   This is additional fix due to daily build fail against previous r22684.
   Refer to the svn -r22684 log for previous details

Tested: 
 jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), cmake (jam)
 2012-08-16 10:50:25 -05:00
Jonathan Kim
231fc4d781 [svn-r22684] Purpose: 
Address HDFFV-7942 - h5diff: incorrect result for comparing attribute data with different type size in same class

Description:
   When comparing attribute data values with same type class but different size, the result was incorrect.  It was due to the size difference and got truncated. 
   Fixed to match up the smaller type size to big type size like what dataset does.

  
Tested: 
 jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows (32-LE cmake), cmake (jam)
 2012-08-15 11:04:26 -05:00
Quincey Koziol
d27ec1d3bd [svn-r22681] Description: 
Clean up file driver property handling, along with some misc. warnings.

Tested on:
    Mac OSX/64 10.7.4 (amazon) w/debug, gcc 4.7.1, C++, FORTRAN & threadsafe
    (h5committest upcoming)
 2012-08-15 09:14:13 -05:00
Vailin Choi
8b72343753 [svn-r22679] Changed H5O_copy_search_comm_dt_check() to use H5O_obj_class() to get object type instead of H5O_get_info(...TRUE...) saving time in traversing metadata. 
(This is part of the checkin to 1.8 branch #22677)
 2012-08-14 11:56:06 -05:00
Vailin Choi
a9602d1b34 [svn-r22676] Changes needed to make the default free-list mapping from H5FD_FLMAP_SINGLE to H5FD_FLMAP_DICHOTOMY. 2012-08-13 15:04:20 -05:00
Allen Byrne
eb4fd07b5a [svn-r22674] Remove checks for filters are available because the h5dump tests never used the filters in the tests. "-H" option excludes data. 
HDFFV-8125
 2012-08-13 10:34:22 -05:00
Allen Byrne
4f4db8799c [svn-r22673] Add "_" to list of version separators 2012-08-13 08:39:17 -05:00
HDF Tester
2eb782130a [svn-r22670] Snapshot version 1.9 release 125 2012-08-12 15:28:06 -05:00